Marmota marmota marmota (Alpine marmot): 107142732
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Entry
107142732 CDS
T09644
Name
(RefSeq) tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107142732
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107142732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Sina_RING
OxoGdeHyase_C
TMP_4
SidF
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
107142732
NCBI-ProteinID:
XP_015341735
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEFVSALADFQRECSCPICLDYLKDPVTISCGHNFCFDCLNHSWKDLTDAFPCPVCRFGF
PERKFRRNPQLCNLIEIAQLLRIRKSKRKRQEENAICEKHNQFMTLFCVKDLQILCTQCS
FSAEHQRHHICPIKQAATFQRRILESSIQPLKNNVERVEKVLILQGRKFLELKKKVEYRR
EEINTEFEQIKLCLQNEQEALLKQIQNEELDILSKLNENLVTFSDHISTLKCLMKEIKGK
CVQSDLALLKDVKSIRQRYRNLKHPELSSLGLNNYSFSLPPQYSGLKRIIKQFHRDVSLD
PNTAYPQLIVSEDRKSVTFGRTKQTVCYNSRRFYLCPAVLGSKMFNSGRHYWEVDVGNKP
QWTVGVCQDYLLWNWRNLPSVLSGFWAIGRYIESGYVVFGPKKTQLLPVPKPSKIGIVLD
FELGEVSFYNGDDRSLLYSFSDSLTKTQTIWPYFYVGTDSKPLKILPVDNER
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgtccgccctggcagacttccaaagggagtgcagttgtcccatctgtctg
gattacttgaaagacccagtgaccattagctgtgggcataacttctgttttgactgcctc
aatcattcctggaaggatctaactgatgcctttccctgccctgtctgtcgatttgggttt
ccagaaaggaagttcaggaggaacccccagctctgtaatttgattgaaattgctcaacta
ctccggatcagaaagagcaagaggaagaggcaagaagaaaatgctatctgtgagaaacat
aatcaatttatgacccttttctgtgtgaaggatctgcagattttgtgtacccagtgcagt
ttctctgctgaacatcagagacaccacatttgtcccattaagcaagctgccaccttccaa
agacgtattctagaatctagcatccagccattgaagaataatgtggaacgagttgaaaaa
gtgctaattctgcaaggtaggaaatttcttgagctgaaaaagaaggtagaatataggaga
gaagaaataaatactgaatttgagcaaattaaactatgtttacagaatgagcaagaggct
ctgcttaagcagatacaaaatgaagagttggatattttatcaaaacttaatgaaaacctt
gtaactttttcagatcacatatccacattaaaatgcttaatgaaggaaataaagggcaag
tgtgtacagtcagacctggcattactaaaggatgttaagagcatacgccagaggtatcga
aacctaaaacaccctgaactttcgtcactcggattaaacaactatagcttcagtcttcct
ccacagtattctggcttaaagagaatcataaagcaatttcatagagatgtgagtttagac
cccaacacagcatatccccagcttattgtctctgaggacagaaaaagtgtgacgttcgga
agaacaaaacagactgtttgttataactcaaggagattttatctctgccctgctgtcctt
ggttctaagatgtttaattctggtagacattactgggaggttgacgtgggaaacaaacct
cagtggacagtaggtgtctgtcaagactatcttctttggaactggaggaatctgccatca
gtcctaagtggcttctgggcaattggacgatatattgagagtggttatgttgtgtttggt
cccaagaaaacccagcttttgccagtaccaaaacccagtaaaataggcattgttttggat
tttgaattgggtgaggtttccttttataatggggatgataggtctctcctatatagtttc
agtgattctttaaccaaaacccaaaccatatggccttatttctatgttggaacagattct
aaacctctgaaaatcttaccagtggataatgaaagataa
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