Marmota marmota marmota (Alpine marmot): 107143390
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Entry
107143390 CDS
T09644
Symbol
Nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmma03037
]
107143390 (Nphp3)
Cilium and associated proteins [BR:
mmma03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
107143390 (Nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_11
TPR_3
AAA_16
HAT_Syf1_CNRKL1_C
KAP_NTPase
NACHT
AAA_22
ANAPC3
14-3-3
AAA_19
ARM_TT21_4th
AAA_14
DUF2225
T2SSE
Viral_helicase1
FliD_C
DUF627
Motif
Other DBs
NCBI-GeneID:
107143390
NCBI-ProteinID:
XP_015342537
Ensembl:
ENSMMMG00000019279
UniProt:
A0A8C6A2Q2
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRNSFRRGAGVAASAGPGSL
PRAAGSGGLLGASFKSTGSSVPELEYSAAEYERLKKEYEIFRVSKNQELLSMGRREAKLD
TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKE
NEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDITAAGTQCEYWSGGALGSE
PSIGSLIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTV
RCYLIYTEETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDVENQYLTIRKWEIEKS
SLVILFIHSTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSDSVQRLIDQVSNLNQ
ANKAKFIDHSGDPAEGVYKTYICVEKIIKQDILGFENTDLETKDLGSDDSLPEEDDFGDV
LWDIHDEQEQMETFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLL
SKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKLL
EEFPRWLEKLSARHQGSIIIVIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPAA
WRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATTCNALYITLFGK
MMARAGRAGGVDKILHECLQCQDTVSLYRLVLRSIKESMTDDTDKELMRQILCLVNVSHN
GVSESELMELYPEMSWAVLTSLIHSLHKMCLLTYGCGLLRFQHLQAWETVRLEYMDGPAT
ISSYRQKLISFFTSQLSQDRVTWRSADELPWLLQQQGSKQKLHGCLLNLFVSQNLYKRGH
FAELLSYWQFVGKDKSAMATEYFDSLKQYEKNCEGEENMICLADLYETLGRFLKDLGLLS
QAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYG
ADHPHTARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQL
EELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNN
LAALCNEKKQYEKAEELYERALDIRKRALAPDHPSLAYTVKHLAILYKKTGKLDKAVPLY
ELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKHIEALPLYERALKIYEDSLGRMHPRV
GETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTHS
PNVFLPQGQR
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcctcgtcccttgtgagtcccgcgggcggagaagtgatcgaggacacttac
ggggcgggcggcggcgaggcctgcgagatcccggtagaggtgaagcccaaggcccgcctg
ctgcgcaactcgttccgccggggcgcgggggtggcggcgtctgccgggccggggtcgctg
ccccgcgcggcgggcagcggcgggctactgggcgccagcttcaagtccaccggctcgtcg
gtgccggagctggagtactcagcggccgagtacgagcggctcaagaaagagtacgagatc
ttccgggtcagcaagaaccaggaattgttgtccatgggccgccgcgaggccaagctggac
accgagaacaagcggctgcgggccgagctgcaggcactccagaaaacttatcagaagata
cttcgggaaaaagaaagtgctttagaagcaaaataccaagcaatggagagagcagctaca
tttgaacatgacagagataaagttaagcggcaattcaagatttttagagagaccaaagaa
aatgaaattcaggacttattgagagccaagcgagagctggagagcaaacttcagaggcta
caggctcaggggatccaagtatttgatcctggggagtctgattcagatgacaactgtaca
gatattactgctgctggaacccagtgtgaatactggagtggtggggccttgggcagtgag
ccctccatagggagcctgatccagcttcaacagtccttcagagggccggagttcgcccac
agttccatagatgtggagggaccctttgcaaacgtcaacagagatgactgggatatcgct
gtagctagtttattacaggtgactcccttattttcacattctctatggagtaacactgtc
agatgttacctcatttacacagaagaaacccagcctgaaatggatcttttcctgaaggac
tattcacctaaacttaaaagaatgtgcgagacaatgggatattttttccatgctgtttat
tttccaatagatgttgaaaatcaatacctcactataagaaagtgggaaattgagaagagt
tccttagttattttattcattcactcaactttaccaagccttttattggaagactgtgaa
gaagcctttctgaaaaaccctgaaggaaaaccacggttaatttatcaccgtctggaggac
ggaaaagtcagttccgactctgtccagcgattgatcgaccaagtttctaacctcaaccag
gccaacaaagccaagttcattgatcactcaggagatcctgcagagggagtatataaaact
tatatttgtgtggaaaagatcattaaacaggatatactgggctttgagaacacagacctg
gagactaaggatttgggaagtgatgattcccttccagaagaagatgattttggggatgtt
ctgtgggacatacatgatgaacaagagcaaatggaaacctttcagcaggcttctaattca
gcccatgagttaggatttgaaaaatattatcaacgcctcaatgatctggtggcagcacca
gccccgattccaccccttctggtgtctggaggaccaggttctggaaagtcccttctttta
tcaaagtggattcagttgcagcagaagaattccccgaacacactgatcctttctcatttt
gtggggaggcccatgtccactagttcagagtcctccttgatcattaaacgcctgacgcta
aagttgatgcagcactcttggtctgtgtcagcactaactttggatcccgctaagctcctg
gaagaatttccacgttggctagagaaactctccgctcgtcatcagggcagcatcatcatc
gttattgattccatagatcaagttcagcaagttgagaaacacatgaaatggctgatagac
ccgctgccagtgaacgtaagagtcatagtttctgtgaacgtggaaacttgccctgcagca
tggaggttgtggcctacacttcatcttgatcctttaaatccgaaagatgcaaaatctatt
ataattgcagaatgccactctgtagacattaaactgagcaaagagcaggagaagaaacta
gaacgacattgtcgttctgctacaacttgcaatgccctttacatcaccctttttggcaaa
atgatggcacgtgctgggagagcaggtggtgtagataagatccttcatgagtgtctccag
tgccaggacactgtttcattgtacaggctggttctgcgctccatcaaggagtccatgaca
gatgacacggacaaagagctaatgagacagattctctgccttgtcaatgttagtcacaat
ggcgtgagtgaatcagagttgatggaactctatcctgagatgtcctgggctgtcttgacc
tcccttattcacagtttacacaaaatgtgtttgttgacatatggttgtggcttgctcagg
tttcaacatctccaagcctgggaaacagtgagactggagtacatggacggtcctgctacc
atttcttcatacaggcaaaagctaattagctttttcacctcacagctaagccaggacaga
gtgacctggaggagtgcagatgagctcccttggcttttgcagcagcaaggaagtaaacag
aagctgcatggttgcctcctcaacctcttcgtgtctcagaacctttacaaaagaggacat
tttgctgagttgctgagttactggcagtttgttggcaaagacaaaagcgcaatggcaaca
gaatactttgactccttaaagcaatatgagaaaaactgcgaaggagaggagaacatgatt
tgccttgcagatctctatgaaaccctggggcgatttctcaaggatcttggccttctcagt
caggctgtggtgcctttgcagaggtctctggaaattcgagagacagctttagacccggat
cacccaagagtagcccagtccctccaccaactggcaagtgtgtacgtgcaatggaagaag
ttcggcaatgcagagcaactgtataaacaggctttggaaatctcagaaaatgcttatggt
gcagatcatcctcacactgctcgtgaactggaggcacttgcaactttgtaccagaagcaa
aacaaatatgaacaagctgaacattttaggaaaaaatcctttaagattcgtcagaaagct
acaaggaggaaaggcaacttgtatggatttgcccttctacgcagacgggccctacagtta
gaagagcttaccttaggtaaggacacacctgataatgcccggaccctcaatgaactgggt
gttctctactatcttcaaaataacctggaaaccgctgaccagtttctgaagcgttcctta
gaaatgagggaacgagttctaggaccagatcacccagactgtgcccagtctctgaataat
ctggcagctctgtgcaatgaaaagaaacagtatgaaaaagcagaagagctttatgaaaga
gctttagatattcggaaacgagccttggctcccgatcacccttctttggcgtatacagtg
aagcaccttgcaatcttgtataagaaaacagggaaacttgacaaagccgtacctttgtat
gagttggctgttgaaattcggcagaaatcctttggcccaaagcaccctagcgtagcaacg
gccttggtgaacttagcagttctttattgccaaatgaaaaaacacattgaagctttgcca
ttatatgaaagagcgttaaagatttatgaagatagcctgggtcggatgcatcctcgagtt
ggagaaacattaaaaaacttagctgtgcttagctacgaagaaggagattttgaaaaagct
gctgaactgtacaaaagggccatggagataaaagaagcagaaacatcacttttgggggga
aaagctccttcaagacattcatcaagtggagacacgttcagcttaaaaaccactcattct
cctaatgttttccttcctcaaggacaaaggtga
DBGET
integrated database retrieval system
