Marmota marmota marmota (Alpine marmot): 107146872
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Entry
107146872 CDS
T09644
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X3
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107146872 (Rbbp6)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107146872 (Rbbp6)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
U-box type E3
107146872 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107146872
NCBI-ProteinID:
XP_015346665
Ensembl:
ENSMMMG00000023320
LinkDB
All DBs
Position
Unknown
AA seq
1793 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSTHPAPSISSLTANPSSLAPPVPGNPSSTPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHPKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PNKRNVPQGETEREYFNRYREVPPPYDIKAYYGRNVDFRDPFEKERYREWERKYREWYEK
YYKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYVGGQSHRSRNIGGNYPE
KLSARDTHNQKDNTKSKEKEGENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKS
REPSGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTK
RKNDGSAVSKKENVTKPAKGPQDKIDGEREKSPRSEPPLKKAKEETPKTDSTKSSSSSQK
DEKIIGTPRKAHSKSTKEHQETKPVKEEKVKKDYSKDVKSEKLTNKEEKAKKPTEKNKPP
DSKGEKRKRKTEEKGAEKDFESSSVKISKLEVTEIVKPSPKRKMEPDIEKLDRTPEKDKT
SSSAAPAKKIKLNRETGKKIGSTENIASTKEPSEKLESTSSKVKQEKGKGKVKRKVTGTE
GSSSTLVDYASTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTTPAEDVIIMIQVPQS
KWDKDDFESEEEDVKSTQPVPSVGKPASVIKNVSTKPSNTVKYTEKESEPSEKIQKLTKE
VSHEITQHEVKSSKNSSSSEKGKTKDRDHSVLEKENPEKRKNSTQPEKDSNLDRLNEQGN
FKSLSQSSKETRASEKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKD
SPPRSKDSASGQKNKPREERELPKKGTGDSKKSNSSPPREKKPHDQKTPYDAKRPSEETK
SVDKNPGKDREKHVLEARNNKESNNSKLLYVLNPPDPQIEKEPVTGQIDKNAIKPKPQLS
HSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGNISKELKDKMMEKAKESLDT
AAVPQVGVSRSQSQSSPSISPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHK
KHKKHKKHKKHAGTELELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcccataggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaataaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggtccaccacctccatcttatacc
tgtttccgttgtggtaaacctggccattatattaagaattgcccaaccaatggggataag
aactttgaatctggtcctaggattaaaaaaagcactggaattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggcgcgatgcttaccaacactggaaaatatgcaata
ccaaccatagatgcagaagcatatgcaattgggaagaaagaaaaaccaccgttcttacca
gaggaaccgtcttcttcctcagaagaagatgatcctatcccagatgagttgttgtgtctc
atctgcaaagatattatgactgatgccgttgtcattccctgctgtggaaatagttattgt
gatgaatgtataagaacagcactcctagagtcagatgaacatacatgtccaacatgccat
caaaacgatgtctctcccgatgctttgattgccaataagtttttacgacaggctgttaat
aatttcaaaaatgaaactggctataccaaaagattaagaaagcaattacctccaccacca
cctccaattccacctccaagacccctcattcagcggaacctgcaacctttgatgagatct
ccaatatcaagacagcaagatcctctgatgattccagtgacatcatcatcaactcaccca
gctccctctatatcttcattaactgctaatccgtcttccttggcccctcctgtgcctgga
aatccatcttctaccccagctcctgtacctgatataactgcaacagtatccatatcagtc
cattcagaaaaatcagatggacctttccgggattctgataataaaatattgccagctgca
gcccttgcatcagaacacccaaagggcacctcctcaattgcaattactgctcttatggaa
gaaaagggttaccaggtgcctgtccttggaaccccatctttgcttggacagtcactacta
cacggacagttgatccccacaactggtccggtaagaataaatgctgctcgtccaggtggt
ggccgtccaggctgggaacattccaataagcttggatatctagtttccccaccacagcaa
attagaagaggagagagaagctgctacagaagtataaaccgtgggcggcatcacagcgaa
agatcacagagaactcaaggcccatcattaccagcaactccagtctttgtacctgttcca
ccacctcctttgtatccacctcctccccacacacttcctctccctccaggtgttcctccc
ccacagttttctcctcaatttcctcctggccagccaccacctgctgggtatagtgtccct
cctccagggtttcctccagctcctgccaatttatctacaccttgggtatcatcaggagtt
cagacagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaggag
ttctatagagaacaacgccgactaaaagaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtctaaatctccctatagtggttcatcatattcaagaagttcatat
acgtattctaaatcaagatctggctcaacacgttcgcgctcttactctcgttcattcagc
cgctcacattctcgatcctattcacgatcacctccatatcctagaagaggcagaggcaag
agtcgcaattaccgttcacggtctagatctcatggctatcatcggtctaggtcaaggtca
cccccatatagacgctatcactcaagatcaagatctcctcaagcatttaggggacagtct
cccaataagcgcaatgtacctcaaggagaaacagaacgtgaatattttaatagatacaga
gaagttccaccaccttatgacataaaagcatattatgggaggaatgttgattttagagac
ccatttgaaaaagaacgttaccgagaatgggagagaaaatacagagagtggtatgaaaaa
tactacaaaggttatgctgctggagcacagcctagaccctcagcaaatagagagaatttt
tccccagagagatttttaccacttaatatcaggaattcacccttcacaagaggtcgcaga
gaagattacgttggtggacagagtcatagaagtcgaaatataggtggcaactatccagaa
aagctctcagcaagagacactcacaatcaaaaggataatacaaagtcaaaagagaaggag
ggtgaaaatgctccaggagatggcaaaggaaataagcataagaaacatcgaaaaagaagg
aagggggaagagagtgaaggttttctgaacccagaattattagagacttctaggaaatca
agagaaccttcaggtgttgaagaaaataaaacagactcattgtttgttctcccaagtaga
gatgatgctacacctgttagggatgaaccaatggatgcagaatccatcactttcaaatca
gtgtctgaaaaagacaagagggaaaaagataaaccaaaagcaaaaggtgacaagaccaaa
cggaaaaatgatggatctgctgtgtccaaaaaagaaaatgtcacaaagcctgctaaagga
ccccaagataaaatagatggagagcgtgaaaaatctcctcggtctgaacctccacttaaa
aaagccaaagaggagactccaaagactgacagtactaagtcatcatcttcctctcagaaa
gatgaaaagatcattggtacccccagaaaagctcactcaaaatcaactaaagaacaccag
gaaacaaaaccagtcaaagaggaaaaggtgaaaaaggactattccaaagatgtcaagtca
gaaaaactaaccaataaggaagaaaaggccaagaaacctactgagaaaaacaaaccacct
gatagtaagggagagaaaaggaaaagaaagactgaagaaaaaggagcagagaaagatttt
gaatcttcttctgtgaaaatctctaaactcgaagtaaccgaaatagtgaaaccatcacca
aagcgcaaaatggaacctgatattgaaaaattggataggaccccagaaaaggacaaaacg
tcttcatcagctgccccagccaaaaaaatcaagctcaaccgagaaaccgggaagaaaatt
ggaagcacagaaaatatagctagtacaaaagagccctccgaaaagttggagtccacatct
agcaaagttaaacaggaaaagggcaaaggaaaggtcaaacgaaaagtaactggaactgaa
ggatccagctcaactcttgtggattatgccagtacgagctcaactggaggcagtcctgtg
cggaaatctgaagagaaaacagatacaaagagaactgtcattaaaaccatggaagaatat
aataatgacaatactactcctgctgaagatgttattattatgatccaggttcctcagtcc
aaatgggataaagatgactttgaatctgaagaagaagatgttaaatccacacagcctgta
ccaagtgtaggaaaacctgccagtgttataaagaatgttagtactaagccatcaaataca
gtcaaatacacagagaaagaaagtgagccatcagagaaaattcagaaactcaccaaagag
gtgagccatgagattacacagcatgaagtcaaaagttcaaaaaactcttcatctagtgaa
aaggggaaaaccaaagatcgagatcattcagtgttagaaaaagaaaaccctgaaaaaagg
aagaacagcactcaaccagagaaagatagtaatttggaccgtctgaatgaacaaggaaat
tttaaaagtctgtctcaatcttccaaagagactagagcttcagaaaagcatgattccatt
cgtggttcctcaaataaagacttcactcccaacagagacaaaaaaactgactatgacaac
agagagtactcaagttccaaacgtagagatgaaagaaatgaattaacaagaagaaaagac
tctcctcctcggagtaaagattctgcatctgggcagaaaaataagccaagggaggagaga
gagttgcctaaaaaaggaacaggagattccaaaaaaagtaattctagtccaccaagagag
aaaaagcctcatgatcagaaaaccccctatgatgctaagcgcccaagtgaagagacaaaa
tctgtagataaaaatcctggtaaggatcgcgagaagcatgtgttagaggcacggaacaat
aaagagtcaaataatagtaaattactttatgtacttaacccaccagacccacagattgaa
aaagaaccagttactggacagattgacaagaatgctatcaagcctaaaccccagttaagt
cattcctccagattgtcctctgacttaactagagagactgatgaagctgcttttgaacca
gactataatgaaagtgacagtgaaagtaatgtatctgtgaaagaagaagaaacttctgga
aacatttctaaggagctgaaagataaaatgatggagaaagcaaaagagagcctggacaca
gcagcagtcccccaggtgggtgtaagcaggagccagagtcaaagtagccctagtattagt
ccaagtagaagtcacagcccttctggaagccagacccgaagccacagtagcagtgccagc
tcagctgaaagtcaggatagcaagaagaagaagaaaaagaaggaaaagaaaaagcacaag
aaacataaaaagcataagaagcataagaaacatgcaggcactgaattagagttggaaaaa
agccagaaacacaaacacaagaaaaagaagtcaaagaaaagcaaggacaaagaaaaggag
aaggagaaagatgaccaaaaagtgaaatctgtcactgtgtag
DBGET
integrated database retrieval system
