Marmota marmota marmota (Alpine marmot): 107148116
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Entry
107148116 CDS
T09644
Symbol
Irf1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04625
C-type lectin receptor signaling pathway
mmma04668
TNF signaling pathway
mmma04917
Prolactin signaling pathway
mmma05133
Pertussis
mmma05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
107148116 (Irf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107148116 (Irf1)
09152 Endocrine system
04917 Prolactin signaling pathway
107148116 (Irf1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
107148116 (Irf1)
09171 Infectious disease: bacterial
05133 Pertussis
107148116 (Irf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107148116 (Irf1)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107148116 (Irf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
107148116
NCBI-ProteinID:
XP_015348224
Ensembl:
ENSMMMG00000015838
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKVWTVTLLKAPEVSSSQTLPAFAELEFLSPPR
DTPTTHTAFCRALAGQMIGNREEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKA
GEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQRKERKSKS
SRDTKSKAKRKSCGDSSPDTFSDGLSSSTLPDDHSSYTAQGYVGQDLELEQALTPAPSPC
VVSSTLPDWHIPVEIVPDSTSDLYNFQVSPMPSTSEAATDEDEEGKLPEDIMKLLEQSDW
QPTNVDGKGYLLNEPGAQPTSIYGDFTCKEEPEVDSPVGDIGLSLHRVFTDLKNMDALWL
DNMLPPVRVPSIQAIPCAP
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccgtggctagagatgcagattaattccaaccaa
attccggggctgatctggattaataaagtgtggacagtaaccctcttaaaggcacctgaa
gtttccagcagccagactctcccagcatttgcagagcttgagttcttatctcctcccagg
gatacccctaccacacacacagcattctgcagggctctggctgggcagatgataggaaac
agagaggaggagatgatcttccagatcccatggaagcatgctgcaaaacatggctgggac
atcaacaaggatgcctgtttgttccggagctgggccatccacacaggccgatacaaagct
ggagaaaaggaaccagatcctaagacatggaaggcaaacttccgctgtgccatgaactcc
ttgccagacatcgaggaggtgaaggaccagagcaggaacaagggcagctcggctgtgcgg
gtataccggatgcttccacccctgaccaagaaccagagaaaagagagaaagtccaagtcc
agccgagacactaagagcaaggccaaaagaaagtcatgtggggactccagccctgacacc
ttctctgatggactcagcagctccactctgcctgatgaccacagcagctatacagctcag
ggatatgtggggcaggacctggagttggagcaggcacttactccagcaccatcaccatgt
gttgtcagtagcactcttcctgattggcacatcccggtggaaattgtgccggacagcacc
agtgacctctacaacttccaggtgtcacccatgccctccacctctgaagctgcaacagac
gaggatgaggaagggaaattacctgaggacatcatgaagctcttggagcaatctgattgg
cagccgacaaacgtggatgggaaggggtaccttctcaatgaacctggggcccagcccacc
tctatctatggagacttcacctgcaaggaggagccggaagttgacagccctgtgggagat
attgggctcagcctacaccgtgtcttcacagatctgaagaatatggatgccctctggctg
gacaatatgctgcccccagtcagggtgccctccatccaagccattccttgtgcaccgtag
DBGET
integrated database retrieval system
