KEGG   Mus musculus (house mouse): 106344
Entry
106344            CDS       T01002                                 
Symbol
Rfc4, A1, RFC37
Name
(RefSeq) replication factor C (activator 1) 4
  KO
K10755  replication factor C subunit 2/4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03030  DNA replication
mmu03410  Base excision repair
mmu03420  Nucleotide excision repair
mmu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106344 (Rfc4)
   03410 Base excision repair
    106344 (Rfc4)
   03420 Nucleotide excision repair
    106344 (Rfc4)
   03430 Mismatch repair
    106344 (Rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmu03032]
    106344 (Rfc4)
   03036 Chromosome and associated proteins [BR:mmu03036]
    106344 (Rfc4)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    106344 (Rfc4)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106344 (Rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    106344 (Rfc4)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106344 (Rfc4)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106344 (Rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    106344 (Rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_16 DUF815 AAA_assoc_2 AAA_30 AAA_22 AAA_11 AAA_24 Mg_chelatase AAA_28 SLFN-g3_helicase RuvB_N AAA_19 AAA_5 HrcA_DNA-bdg Gp44_lid ResIII AAA_7
Other DBs
NCBI-GeneID: 106344
NCBI-ProteinID: NP_663455
MGI: 2146571
Ensembl: ENSMUSG00000022881
UniProt: Q99J62
LinkDB
Position
16:complement(22932698..22946480)
AA seq 364 aa
MQAFLKGTSVSAKAQLTKDRGTPATAGSSGETKKVKPVPWVEKYRPKCVDEVAFQDEVVA
VLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENVKIGNEEIAYLVKISEGDLRK
AITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGIFTACHSGSFDKLEAVVKNLIDEG
HAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDKCLADGADEHLQLMSLCATVMQQL
TQNC
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaggcatttctgaaaggcacatctgtcagtgccaaagcacaactgaccaaggaccgg
gggacacctgccactgcaggaagcagtggagaaaccaagaaagtcaaaccagttccttgg
gtggaaaaataccgtccaaagtgtgtggatgaagtggctttccaggacgaagtggttgca
gtgctgagaaagtccttagaaggagctgaccttcctaatctcttgttctatgggccacct
ggaactggcaaaacatccaccattttggcagcagctagagagctctttgggcctgaactc
tttcgattaagagtccttgagttaaatgcatctgatgaacgtggaatacaagtagtccga
gagaaagtgaaaaattttgctcagttaactgtatcaggaagtcgttcagatgggaagcca
tgtcctccctttaagattgtaattctggatgaagcagattcgatgacttcagctgctcag
gcagctttaaggcgtaccatggaaaaagaatcaaaaacaaccagattctgcctcatctgt
aactatgtcagtcgaataattgaacccctcacttctagatgttcaaaattccgcttcaag
cctctgtcagataagattcaacaggagcgattactggatattgctgagaaggaaaatgtc
aaaattggcaatgaggaaatagcgtatcttgttaagatatcagaaggagatttacggaaa
gccatcacatttcttcagagtgccactcgactaacaggtggaaaggaagtctctgaagat
gtgatcacagacattgctggggtaataccagctgcaaccattgatggaatattcactgca
tgtcacagtggctcttttgacaaactagaagctgtggtaaagaacctcatagatgaagga
catgcagctactcagcttgtcaatcaacttcatgatgcaattatagaaaatgaaaatctg
tctgataaacacaagtccattatcacagagaaacttgctgaagtagacaagtgcttggca
gatggtgcagatgaacacctgcagttgatgagcctttgtgcaactgtgatgcagcagcta
actcagaactgttag

KEGG   Mus musculus (house mouse): 19687
Entry
19687             CDS       T01002                                 
Symbol
Rfc1, 140kDa, Alp145, RFC140, Recc1
Name
(RefSeq) replication factor C (activator 1) 1
  KO
K10754  replication factor C subunit 1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03030  DNA replication
mmu03410  Base excision repair
mmu03420  Nucleotide excision repair
mmu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    19687 (Rfc1)
   03410 Base excision repair
    19687 (Rfc1)
   03420 Nucleotide excision repair
    19687 (Rfc1)
   03430 Mismatch repair
    19687 (Rfc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmu03032]
    19687 (Rfc1)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    19687 (Rfc1)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    19687 (Rfc1)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     19687 (Rfc1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT RuvB_N AAA_22 Rad17 BRCT_2 AAA_14 AAA_16 AAA_33 AAA_5 AAA_30 Zeta_toxin nSTAND3 AAA_17 AAA_18 AAA_7 RNA_helicase NTPase_1 AAA_19 AAA_28
Other DBs
NCBI-GeneID: 19687
NCBI-ProteinID: NP_035388
MGI: 97891
Ensembl: ENSMUSG00000029191
UniProt: P35601 G3X8Z6
LinkDB
Position
5:complement(65419195..65492988)
AA seq 1131 aa
MDIRKFFGVISSGKKPVNETVKNEKTKASEGTVKGKKGVKEAKVNNSGKEDASKPKQHSK
KKRIINDSDSESEETVQVKNAKKKSEKLSLSYKPGKVSQKDPVTYVSETDEDDDFVCKKA
ASKSKENGVSTNSYLGTSNVKKNEENVKTKNKPLSPIKLTPTSVLDYFGTESVQRSGKKM
VTSKRKESSQNTEDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDEEPKIKKA
RKDSEEGEESFSSVQDDLSKAEKQKSPNKAELFSTARKTYSPAKHGKGRASEDAKQPCKS
AHRKEACSSPKASAKLALMKAKEESSYNETELLAARRKESATEPKGEKTTPKKTKVSPTK
RESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
DEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTMP
GKRSKYEMAAEAEMKKEKSKLERTPQKNDQGKRKISPAKKESESKKCKLTLLKNSPMKAV
KKEASTCPRGLDVKETHGNRSSNKEECLLWVDKYKPASLKNIIGQQGDQSCANKLLRWLR
NWHKSSPEEKKHAAKFGKLASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELN
ASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDGMAGNEDRGGIQE
LIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP
PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRAKKDIRLGPFDVTRKVF
AAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHLMLLSRAADSIC
DGDLVDNQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFPSWLGKHSSTGKHDRIV
QDLSLHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGAQHVIKLMDTYYLMKEDFE
NIMEVSSWGGKPSAFSKLDPKVKAAFTRAYNKEAHLTPYSLQVVKTSRLSTGPALDSEYS
EEFQEDDTQSEKEQDAVETDAMIKKKTRSSKPSKSEREKESKKGKGKNWKK
NT seq 3396 nt   +upstreamnt  +downstreamnt
atggacattcggaaattctttggggttatatcaagtggaaaaaagcctgtaaacgagaca
gtaaagaatgagaagacaaaagcttcggagggaactgtcaaaggaaaaaagggagtcaag
gaggccaaggtcaataactccggtaaagaggacgcctccaaaccaaagcagcacagcaag
aagaagaggatcatcaatgactcagactcagagtcagaggagacagtacaggtaaaaaat
gctaaaaagaaatcagaaaaattgtcactgtcttataaacctggtaaagtctctcagaag
gatcctgtcacctacgtctctgagacagatgaagatgatgactttgtatgtaaaaaggca
gcctccaaatcaaaagagaatggagtatctacaaatagttaccttggaacatcaaacgtg
aaaaaaaatgaagaaaacgttaagactaagaacaagccgttatctccaataaaactcaca
ccaacgtcagtgctcgactattttggaactgaaagtgtccagagatctgggaagaagatg
gtgacaagcaaaaggaaagaatcttctcaaaacacagaggattccagattaaatgatgag
gccatcgccaagcagctgcagctggatgaagatgcagagctggagaggcagttgcatgaa
gatgaagaatttgcaagaacactggccttattggatgaagaacccaagatcaaaaaggcc
cgaaaggattctgaagagggagaagaatcattttcatctgtccaagatgatttaagcaaa
gcagaaaagcagaaaagccctaataaagccgagcttttctcaactgcaagaaagacctac
agtcctgctaagcatggcaaggggagggcttcagaagatgctaagcagccttgcaaatca
gctcaccggaaggaagcctgttcctcacccaaggccagtgccaaactggcgcttatgaaa
gcaaaagaagaaagttcttacaacgaaacagagctgctggctgcaagaagaaaagaaagc
gccactgaacccaaaggagagaaaacaactcctaagaaaacgaaagtttctccaactaag
agagagtctgtaagcccagaagactctgaaaagaagcgcactaattatcaagcttatcga
agctacttgaaccgagaaggtcccaaagctctgggctccaaagaaatacccaagggagct
gaaaattgcttggaaggcctgacgtttgtgatcacaggagtgctggagtccattgaacga
gacgaagccaagtctctaattgaacgttatggggggaaagtaacaggaaacgtgagcaag
aaaaccaactacctcgtcatgggccgcgacagtgggcagtccaagagtgacaaggcagca
gctctgggaacaaaaatcctcgatgaagacggcctgttggatctgattcgaactatgcca
ggcaagagatccaagtatgagatggctgctgaggctgagatgaagaaagaaaagtccaaa
ttggagcgaacaccccaaaaaaatgatcaaggaaaaagaaaaattagtccagccaagaag
gagtcagagtctaaaaagtgcaagctgactctcctaaagaacagtcctatgaaggcagtg
aagaaggaggcaagcacgtgcccaaggggcctggatgtcaaggagacacatggcaaccgc
agtagcaacaaagaggaatgtctgctctgggtggataagtacaagcccgcctcactcaag
aacataatcggacagcagggtgaccagagctgtgccaacaaattactacgttggctcaga
aactggcacaagagttctcctgaagagaaaaaacatgcagcaaagtttggcaaacttgcc
agcaaagatgatggctccagtttcaaggcagctctgctgtctggccctccaggtgttggc
aaaaccactacagcttctcttgtgtgtcaggaattgggctacagttatgtggaactaaat
gcaagtgatactcggagtaagaacagtttgaaagcagttgttgctgaatccttgaacaac
accagcatcaaaggcttttatacaagtggagcggctccttccgtgagtgcgaggcacgcc
ctcatcatggatgaggtcgatggcatggcaggcaatgaagacaggggtggaattcaggag
ctaataggcctgataaagcatactaaaattcccatcatttgtatgtgcaatgatagaaac
caccccaaaattcgctcattggttcattattgttttgatcttcgtttccaaagacctcga
gttgaacagattaagagtgcaatgctgtctattgcatttaaagagggtttaaaaatcccc
cctccagctatgaatgaaataattttgggagctaatcaagatgtcagacaggttttacac
aatctcagtatgtggtgtgcacaaagtaaggccctgacctatgaccaagccaaggctgat
tctcagagggctaagaaggatatcagactgggcccatttgatgtcactcggaaagtgttt
gcagctggagaggagactgcacacatgtcactgatggacaagtcagatctcttcttccat
gactattccatagcacccctctttgtccaggagaactacctgcatgtaaagcctgtggct
gcaggaggtgacatgaaaaagcacttgatgcttttaagccgggcagcagatagcatatgt
gacggtgacttagtggacaatcagatccggagtaagcaaaactggagtcttctgcccacc
caggccatctatgccagtgttcttcctggagagttgatgcggggctacatgactcagttt
ccgagcttcccgagctggctggggaagcactcgtctacgggcaaacatgatcggattgtt
caggacctatccttgcacatgagtcttagaacttactccagcaaaaggacagtgaacatg
gattacctgtcacacatcagagacgcacttgtacgacccttgacctcacaaggggtagaa
ggggctcagcatgtcatcaaacttatggacacatactatctgatgaaagaagattttgag
aacatcatggaagttagcagctgggggggcaagcccagtgccttttccaagctggatccc
aaggtgaaagcggccttcacaagagcctacaataaggaggcccacctgaccccatactca
cttcaggtagtaaagacatcgaggctcagcacgggtccagcactggattctgagtacagt
gaggagttccaggaagatgacactcagtctgagaaagagcaggatgcagtggagactgac
gccatgatcaagaaaaagacaagatcttcaaaaccttcaaagtcagaaagagagaaggag
tccaaaaaaggaaaaggaaagaattggaagaaatga

KEGG   Mus musculus (house mouse): 19718
Entry
19718             CDS       T01002                                 
Symbol
Rfc2, 2610008M13Rik, 40kDa, Recc2
Name
(RefSeq) replication factor C (activator 1) 2
  KO
K10755  replication factor C subunit 2/4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03030  DNA replication
mmu03410  Base excision repair
mmu03420  Nucleotide excision repair
mmu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    19718 (Rfc2)
   03410 Base excision repair
    19718 (Rfc2)
   03420 Nucleotide excision repair
    19718 (Rfc2)
   03430 Mismatch repair
    19718 (Rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmu03032]
    19718 (Rfc2)
   03036 Chromosome and associated proteins [BR:mmu03036]
    19718 (Rfc2)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    19718 (Rfc2)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    19718 (Rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    19718 (Rfc2)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    19718 (Rfc2)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     19718 (Rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    19718 (Rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Viral_helicase1 Mg_chelatase AAA_24 AAA_11 Rad17 AAA_assoc_2 RuvB_N nSTAND3 DNAX_ATPase_lid AAA_19 MipZ AAA_5 AAA_18 AAA_28 ABC_tran T2SSE AAA_25 AAA_30 AAA_23 NTPase_1 MeaB RNA_helicase SLFN-g3_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 19718
NCBI-ProteinID: NP_064406
MGI: 1341868
Ensembl: ENSMUSG00000023104
UniProt: Q9WUK4 Q4KL82
LinkDB
Position
5:134611544..134627182
AA seq 349 aa
MEVQESGCDPSESGAQEPSPVPSKTAGHYELPWVEKYRPLKLNEIVGNEDTVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGY
INSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKT
FPMAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggaggttcaggagagtggctgtgacccatccgagagtggggcgcaggagccctcgcct
gtccccagcaagaccgccggccactacgagctgccgtgggttgaaaaatacagaccattg
aagctcaacgaaatagtgggcaatgaagacactgtgagcaggctggaggtctttgcaaga
gaaggcaatgtgcccaatatcatcattgctggtcccccaggaactggcaagacaaccagc
atcctctgcttggctcgagccttgctgggccccgccctgaaggacgcagtcctggaactc
aatgcctcaaatgacaggggcatcgatgtggtgaggaataaaatcaaaatgttcgcccag
cagaaagtcacccttcccaagggccggcacaagatcatcattctagatgaagcagacagc
atgacggacggtgcccagcaggccctcaggagaaccatggaaatctactcgaagacgacc
cgattcgctttggcgtgtaatgcttcagacaaaatcatagagcccatccagtcccgctgt
gcggtgctccgctacaccaagctcactgacgctcaggtcctcaccaggctcatgaatgtc
atcgagaaggaaaaggtgccatacacagatgacggcctggaagccattatcttcacagcc
cagggagacatgcgccaggcactgaacaacctgcagtccaccttctcaggatttggctat
atcaacagtgagaatgtattcaaggtctgcgacgagccccaccccctgctggtgaaggag
atgatccagcactgcgtggacgccaacattgacgaggcctataagattcttgctcacctg
tggcacctgggctactcaccagaagatgtcatcggcaacattttccgagtctgcaaaacc
ttcccgatggctgaatacttgaaactggagttcatcaaggagattggatacactcacatg
aaagtggcggaaggagtgaactccctgctgcagatggctgggctcctggccaggctgtgt
cagaagaccatggctccagtggccagctga

KEGG   Mus musculus (house mouse): 69263
Entry
69263             CDS       T01002                                 
Symbol
Rfc3, 2810416I22Rik, 38kDa, Recc3
Name
(RefSeq) replication factor C (activator 1) 3
  KO
K10756  replication factor C subunit 3/5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03030  DNA replication
mmu03410  Base excision repair
mmu03420  Nucleotide excision repair
mmu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    69263 (Rfc3)
   03410 Base excision repair
    69263 (Rfc3)
   03420 Nucleotide excision repair
    69263 (Rfc3)
   03430 Mismatch repair
    69263 (Rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmu03032]
    69263 (Rfc3)
   03036 Chromosome and associated proteins [BR:mmu03036]
    69263 (Rfc3)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    69263 (Rfc3)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    69263 (Rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    69263 (Rfc3)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    69263 (Rfc3)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     69263 (Rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    69263 (Rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 ABC_tran AAA_2 Sigma54_activ_2 ATPgrasp_ST DUF2247 zf-HC2
Other DBs
NCBI-GeneID: 69263
NCBI-ProteinID: NP_081285
MGI: 1916513
Ensembl: ENSMUSG00000033970
UniProt: Q8R323 Q3TKD1
LinkDB
Position
5:complement(151566282..151574673)
AA seq 356 aa
MSLWVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GIGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggtggacaagtaccggccgagctcccttgcccggctggactatcataag
gaacaggcagcacagctgcgcaacctggtgcagtgtggagactttcctcacctcttagta
tatggaccatcaggtgctggaaaaaagacaagaattatgtgtattctacgtgaactttat
ggtatcggggtggaaaaactgagaattgagcatcagactatcacaaccccgtctaaaaaa
aaaattgaaatcagcaccattgcaagcaactaccaccttgaagttaatcccagtgatgcg
gggaacagcgaccgagttgtaattcaggagatgctgaagacagtggcccagtcacaacaa
cttgaaaccagctcacaaagagacttcaaagtggtattattgacagaggtggacaaactc
acaaaggatgctcagcatgccttacgcagaactatggagaaatacatgtctacctgcagg
ctcatcttgtgctgcaattccacatccaaggtgatacccccgatccgaagcaggtgcctg
gcagttcgtgtgcctgctcccagcatcgaagatatttgcagtgtactatccactgtctgc
aggaaggaaggtctggctctcccttcgacattggcccgtaggctggccgagaagtcatgc
cgaaacctcaggaaagccttacttatgtgtgaggcctgcagagtgcagcaataccctttt
acggaagaccaagaaatcccagagacagactgggaggtgtatctgagggagaccgcaaat
gctattgtcagtcagcagacgccacagaggctccttgaagtccgtggaaggctctatgag
cttctaactcattgtattcctcctgagattataatgaagggcctcctctcagaactcctc
cataactgtgatgggcagctgaaaggggaagtggcacagatggcagcctactatgagcac
cgactacagctgggcagcaaagccatttatcatttggaagcatttgtggcgaagtttatg
gcactttataagaagttcatggaggatggactggaaggcatgatgttctga

KEGG   Mus musculus (house mouse): 72151
Entry
72151             CDS       T01002                                 
Symbol
Rfc5, 2610020K06Rik, 2610209F07Rik, 36.5kDa, 36kDa, Recc5
Name
(RefSeq) replication factor C (activator 1) 5
  KO
K10756  replication factor C subunit 3/5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03030  DNA replication
mmu03410  Base excision repair
mmu03420  Nucleotide excision repair
mmu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    72151 (Rfc5)
   03410 Base excision repair
    72151 (Rfc5)
   03420 Nucleotide excision repair
    72151 (Rfc5)
   03430 Mismatch repair
    72151 (Rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmu03032]
    72151 (Rfc5)
   03036 Chromosome and associated proteins [BR:mmu03036]
    72151 (Rfc5)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    72151 (Rfc5)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    72151 (Rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    72151 (Rfc5)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    72151 (Rfc5)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     72151 (Rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    72151 (Rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 AAA_19 ATPase_2 AAA_30 PhoH TIP49 AAA_7 TniB DNAX_ATPase_lid nSTAND3 Mg_chelatase Thioredoxin_6 T2SSE bpMoxR AAA_25 AAA_3 ABC_tran AAA_28
Other DBs
NCBI-GeneID: 72151
NCBI-ProteinID: NP_082404
MGI: 1919401
Ensembl: ENSMUSG00000029363
UniProt: Q9D0F6 Q5HZI8
LinkDB
Position
5:complement(117517210..117527088)
AA seq 339 aa
MTAAAPSQQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHL
LTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgacggcggccgcgccttcgcagcagcggcccgcggcggcccgggcccggaacctgccc
tgggttgagaagtaccggccacagaccctggccgatctcatttctcaccaggacattctg
agtaccattcagaagttcatcagtgaagaccgcctgccacacctacttctctatggccct
ccagggacaggaaagacatccaccatcctggcctgtgccaagcaactgtacaaagataaa
gaatttggctccatggtcttggagctgaatgcttctgacgaccgagggatcgatattgtt
cgggggccaatcctcagctttgccagcacaaggacaatcttcaagaaagggtttaagctt
gtgatcctggacgaagccgacgccatgactcaggatgcccagaacgccttgagacgagtg
attgagaagttcacagaaaacaccaggttctgcctcatctgtaactacctgtccaagatc
atccctgccttgcagtctcggtgcacgaggttccgatttggccctctgacacccgagctc
atggtccctcgactggaacatgtagtacaagaagagaatgtggatataagtgaagatgga
atgaaggcccttgtcactctgtccagtggggacatgcgaagggctttgaacatccttcag
agtaccaatatggcctttgggaaggtgacagaggagactgtctacacctgcaccggacac
ccactcaagacggacattgccaatatactggactggatgctcaatcaggacttcaccact
gcctacaaaaacatcatggagctgaagactctgaagggcttggcgctgcatgacatcctg
acagaggttcacttgtttgtacacagagttgactttccatcttcagttcggatacactta
ttgaccaaaatggcagacatcgagtacagactttctgttggcaccagtgagaagatacag
ctgagctccctcatcgccgcttttcaagtcaccagagacctgatagttgcagaggcctag

DBGET integrated database retrieval system