Mus musculus (house mouse): 108037
Help
Entry
108037 CDS
T01002
Symbol
Shmt2, 2700043D08Rik, SHMT
Name
(RefSeq) serine hydroxymethyltransferase 2 (mitochondrial)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu00260
Glycine, serine and threonine metabolism
mmu00630
Glyoxylate and dicarboxylate metabolism
mmu00670
One carbon pool by folate
mmu01100
Metabolic pathways
mmu01200
Carbon metabolism
mmu01230
Biosynthesis of amino acids
mmu01240
Biosynthesis of cofactors
mmu01523
Antifolate resistance
mmu04981
Folate transport and metabolism
Module
mmu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
108037 (Shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
108037 (Shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
108037 (Shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
108037 (Shmt2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
108037 (Shmt2)
Enzymes [BR:
mmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
108037 (Shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
108037
NCBI-ProteinID:
NP_082506
MGI:
1277989
Ensembl:
ENSMUSG00000025403
UniProt:
Q9CZN7
LinkDB
All DBs
Position
10:complement(127352992..127358313)
Genome browser
AA seq
504 aa
AA seq
DB search
MVSFSLLRTTRPLQRCGQLVCMAARAQHSKVAQTQAGEAAGGWTGQESLSDSDPEMWELL
QREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ
RRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDV
KRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREV
CDEVRAHLLADMAHISGLVAAKVIPSPFKYADVVTTTTHKTLRGARSGLIFYRKGVRTVD
PKTGKEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLRNAQA
MADALLKRGYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT
PGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAKLQDFKSFLLKDPETSQ
RLANLRQQVEQFARGFPMPGFDER
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtatccttctctttgcttcggaccactcggcctctgcagagatgtggtcagctggtc
tgcatggctgcccgggcccagcacagcaaggtggcccagacgcaggctggggaagcagct
ggaggttggacgggccaggagagtttatcagacagtgaccctgagatgtgggagcttctg
cagagggagaaggacagacagtgtcgcggcctggagctcatcgcctcagagaacttctgc
agccgagctgcgctggaggccctggggtcctgtctcaacaacaagtactcggagggttac
cctggcaagagatactacggaggagcggaagtggtggacgagatcgagctgctctgccag
cgccgggccttggaagcctttgacctggatccggcacagtggggagtcaatgtgcagcca
tactcagggtccccagccaatctggctgcctatacggcccttctgcagcctcatgatcga
atcatggggttggacctgcccgatgggggccatctcacccatggctacatgtctgatgtc
aagcggatctccgccacatccattttcttcgagtctatgccctataagctcaatccccaa
actggcctcatcgactacgaccagctggcgctgaccgctcggcttttccgaccgcggctc
atcatagctggcacgagtgcctatgcccgcctcattgactatgcacgcatgagagaggtc
tgtgatgaggtcagggcacacctgctggcagacatggcccacatcagtggcctggtggct
gccaaggtgatcccctcccctttcaagtacgcggatgttgttaccaccaccactcacaag
acactgcgaggggccaggtcagggctcatcttctaccggaagggagtacgaaccgtagac
cccaagactggcaaagagatcccttatacctttgaggaccgaatcaacttcgctgtgttc
ccatccctacagggtggcccccacaaccacgccattgctgcagtagccgtggctctcaag
caggcctgcacccctatgttccgcgagtactccttacaagtgctgaggaacgcccaggcc
atggctgatgccctgctcaagcgaggatactcgctggtgtctggtggcactgacacccac
ctggtgctggtggacctgcggcccaagggcctggatggagcccgagccgaacgcgtgttg
gaactcgtctccatcacagccaacaagaacacctgtcctggagaccggagcgccattact
ccggggggcttgaggcttggggcccccgcgttgacctctcgccagttccgtgaggacgac
ttccgtagagtcgtcgattttatcgatgagggagtcaacattggcttggaggtgaagcgc
aagactgccaagctccaggatttcaaatccttcctgctcaaagacccagagacaagccag
cgtttggccaacctccggcaacaggtggaacagtttgccaggggcttccccatgcctgga
tttgatgaacgttga
Mus musculus (house mouse): 20425
Help
Entry
20425 CDS
T01002
Symbol
Shmt1, Shmt, mshmt, mshmt1, mshmt2
Name
(RefSeq) serine hydroxymethyltransferase 1 (soluble)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu00260
Glycine, serine and threonine metabolism
mmu00630
Glyoxylate and dicarboxylate metabolism
mmu00670
One carbon pool by folate
mmu01100
Metabolic pathways
mmu01200
Carbon metabolism
mmu01230
Biosynthesis of amino acids
mmu01240
Biosynthesis of cofactors
mmu01523
Antifolate resistance
mmu04981
Folate transport and metabolism
Module
mmu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
20425 (Shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
20425 (Shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
20425 (Shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
20425 (Shmt1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
20425 (Shmt1)
Enzymes [BR:
mmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
20425 (Shmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
20425
NCBI-ProteinID:
NP_033197
MGI:
98299
Ensembl:
ENSMUSG00000020534
UniProt:
P50431
Structure
PDB
PDBj
LinkDB
All DBs
Position
11:complement(60679723..60702062)
Genome browser
AA seq
478 aa
AA seq
DB search
MADRDATLWASHEKMLSQPLKDSDAEVYSIIKKESNRQRVGLELIASENFASRAVLEALG
SCLNNKYSEGYPGQRYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFA
VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPETGYINYDQL
EENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFE
HCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQGGPHN
HAIAGVAVALKQAMTTEFKIYQLQVLANCRALSDALTELGYKIVTGGSDNHLILMDLRSK
GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIH
RGIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPGLPDF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagggatgccaccctgtgggcttctcatgagaagatgttgtcgcagcccctc
aaggacagtgatgccgaggtttacagcatcattaaaaaggagagcaaccggcagagggtc
ggattagagctgattgcctcggagaattttgccagccgagctgtgttggaggccctggga
tcttgcttaaataacaaatactctgagggatatccaggccaaaggtattatggcgggacc
gagttcatcgatgagctggagatgctgtgtcagaagcgtgcattacaggcctaccatctg
gatcctcagtgctggggtgtcaatgtccagccttattcaggctcccctgcaaactttgct
gtgtatactgccctggtagagcctcatgggcgaatcatgggcttggacctgccagacggt
ggccatctgacccatggcttcatgacagacaagaagaaaatctctgccacatctatcttc
tttgaatccatgccttataaggtgtacccagagactgggtacatcaactatgaccagctg
gaggagaatgccagcctcttccacccgaagctgatcatcgcagggaccagctgctactcc
cggaacctggactacgcacggctgcggaagattgcggatgataatggggcgtatctcatg
gcagacatggcacatatcagtgggctcgtggcagctggggtggtgccctccccctttgaa
cactgccatgtagtgaccactacaacccacaagaccctgagaggctgccgtgctggtatg
atattctacagaaagggtgtgcgcagtgtggatcccaagactggcaaagagacttactat
gaactggagtccctcatcaactctgccgtgttcccaggccttcaggggggtcctcacaac
catgccattgctggtgttgctgtggccctgaagcaagccatgactacagaattcaaaatc
taccagctccaggtgttggccaactgcagggctctgtctgatgcactcacagagctaggc
tacaaaatagtcacaggtggctctgataatcacttgatcctaatggatctgcgttctaag
ggtactgatggtggaagggctgagaaggtactagaagcctgttctatcgcctgcaacaag
aatacctgcccaggtgacaagagcgcgttacggcccagtggactgcgactggggactcca
gcattgacatcccgaggacttttggaagaagacttccaaaaagtagcacactttatccac
agggggatagagttgacactgcagattcagagccacatggccacgaaggccacactgaaa
gagttcaaagagaagctggcaggagatgagaagatccagagtgctgtggcaactctccgg
gaagaagtggagaactttgcttccaacttctcactacctggccttcctgacttctga
DBGET
integrated database retrieval system