Mus musculus (house mouse): 108989
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Entry
108989 CDS
T01002
Symbol
Tpr, 2610029M07Rik
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu05014
Amyotrophic lateral sclerosis
mmu05200
Pathways in cancer
mmu05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108989 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108989 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
108989 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108989 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
108989 (Tpr)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108989 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
108989
NCBI-ProteinID:
NP_598541
MGI:
1922066
Ensembl:
ENSMUSG00000006005
UniProt:
F6ZDS4
LinkDB
All DBs
Position
1:150268544..150325686
Genome browser
AA seq
2431 aa
AA seq
DB search
MTSGGSASRSGHRGVPMTSRGFDGSRRGSLRRAGARETASEAADGAAPAAGLRASPCSLA
SPSAAAAVAAIPADMAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKF
KVESEQQYFEIEKRLSQSQERLVTETRECQNLRLELEKLNNQVKVLTEKTKELETAQDRN
LGIQSQFTRAKEELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKL
DELQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNL
ENKKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLS
NLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKI
GKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQ
DQLLLEKQENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQ
RLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADI
SSSSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENS
LAELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSS
TSQTVSTPAPEPVIDSTEAIEAKAALKQLQEIFENYKKEKIDSEKLQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLNSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINL
HLNTKELLKNAQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSTVQNEVQEALQRASTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKAESQLLE
CKASWEERERVLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKDAVQAPLNVSL
NEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNVER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQQLINQQKDPDTEEYRKLLSEKEIHTK
RIQQLNEEVGRLKAEIARSNASLTNNQNLIQSLREDLSKARTEKEGIQKDLDAKIIDIQE
KVKTITQVKKIGRRYKTQFEELKAQQNKAMETSTQSSGDHQEQHISVQEMQELKDTLSQS
ETKTKSLEGQVENLQKTLSEKETEARSLQEQTVQLQSELSRLRQDLQDKTTEEQLRQQMN
EKTWKTLALAKSKITHLSGVKDQLTKEIEELKQRNGALDQQKDELDVRMTALKSQYEGRI
SRLERELREHQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIK
PTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQ
SEGPVEHVPVFGNASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPTN
QELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAGDQVSEDT
VEMPLPKKLKMVTPVGTEEEVMAEESTDGEAETQAYNQDSQDSIGEGVTQGDYTPMEDSE
ETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDDD
DDEEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESHQRAA
DSQNSGEGNTSAAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTIHAPPQ
ELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEA
IHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVP
TTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVEAES
EGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTL
RQGVRGRQFNRQRGISHAMGGRGGINRGNIN
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atgacctctggtggctcggcttctagaagtggccacagaggagtacccatgacatcccgg
ggttttgacgggtcccgccgcgggagtctcaggcgggcaggcgcgcgagagaccgcgagc
gaggcggcggacggggcggctccggcggctgggctccgcgcttctccttgctccttggct
tctccttcagccgctgcggctgttgccgcgatcccggccgacatggcggcggtgttgcag
caagtgctggagcgcccggaactgaacaaactgccgaagtcgacgcagaacaaacttgag
aagttcctggccgagcagcagtccgagatcgactgcctgaaggggcggcacgagaaattt
aaggtggagagtgaacaacaatactttgagatagagaagaggctctcacagagtcaggag
aggcttgtcactgaaacccgggagtgtcagaacttgaggctggagcttgagaagctaaat
aaccaagtaaaagtgttaactgaaaaaaccaaagaactggaaactgctcaagaccgtaat
ctgggcattcagagccagtttacaagagcaaaggaagagttagaagctgaaaaaagagat
ttaatcagaaccaatgagaggttatctcaggaagttgaatatttaacagaggatgttaaa
cgtctaaatgaaaaacttaaagaaagcaatacgacgaagggtgaacttcagttaaagctg
gatgaacttcaagcttctgatgttgctgtgaagtatcgagaaaaacgcttagaacaagaa
aaggaattgctacacaatcaaaattcatggctgaacacagagttgaaaaccaaaactgat
gagctgttggctctaggaagagaaaaaggaaatgaaattctggaacttaagtgtaatctt
gaaaacaaaaaagaagaggttctgagactggaagaacagatgaatggcttgaaaacatca
aatgaacatcttcagaaacatgtagaggatttgttgacaaaattaaaagaggccaaagaa
cagcaggccagtatggaagagaaattccacaatgagttaaatgctcacataaagctctct
aatctctacaagagcgctgctgatgactcagaggcaaagagtaatgagctaacccgggca
gtggacgagctgcacaaactgctcaaagaagcaggagaagccaacaaaacaatacaagat
catcttctacaagtggaagaatctaaagatcagatggaaaaagaaatgcttgagaaaata
ggaaaattggagaaggaattagagaatgcaaatgacctgctttctgctacaaaacgtaaa
ggagctatattgtctgaagaagagcttgcagccatgtctcccaccgcagcagctgtagct
aaaattgtaaagcctggcatgaaattaactgagctatataatgcttatgtggaaactcag
gatcagttgcttttggaaaaacaagaaaataaaaggattaataagtatctggatgagata
gtaaaagaagtggaagccaaagcaccgattttgaaacgccagcgcgaagagtatgagcgt
gcacagaaagctgtggccagtctttctgcaaagcttgagcaagctatgaaggagattcag
cgattgcaggaggacactgataaagccaacaaacattcatcggtacttgaaagggacaat
cagagaatggaaatacaaataaaagacctttcgcaacagataagagtgctcttgatggaa
cttgaagaagccaggggtaaccatgtaattcgggatgaggaggtcagctctgctgacatc
agtagttcgtctgaagtgatttcgcagcacctagtatcttacaggaacatcgaagagctt
cagcagcagaatcagcgtctgctattcgctcttcgagaacttggggaaaccagggaacga
gaagagcaagagacaacttcctctaagattgctgaacttcagcataaacttgagaactct
ctcgctgaactggaacagctccgtgagtcacgacaacatcagatgcagcttgttgattcc
atagtgcgtcagcgtgacatgtaccgaattttattgtcacaaacaacaggaatggccatt
cccttacaagcttcaagtttagatgatatttctcttctctcaactccaaaacgttcaagt
acatcacagactgtttccactcctgctccggaacccgtcattgactccacagaggctata
gaagcaaaggctgcccttaaacagttgcaggaaatctttgagaactataaaaaagaaaaa
atagacagtgagaaacttcaaaatgagcagctagagaaacttcaagagcaagtcacagac
ctgcgctcacaaaacaccaaaatttctactcagctagattttgcttctaaacgttatgaa
atgctgcaagataatgtagaaggatatcgtcgagaaataacatctctacaagagagaaat
cagaaactcactgcaactactcagaagcaggaacagatcatcaacacaatgacgcaagac
ttgagaggagccaatgaaaagctagcagttgcagaagtaagagcagaaaatttaaagaag
gaaaaagaaatgcttaaattgtctgaagtccgtctttctcagcaaagagagtctttgtta
gctgaacagagggggcagaacttgttgctgactaatctacagacaatccagggcatacta
gagcgatctgagactgaaaccaaacaaaggctgaatagccagatagaaaaactggagcat
gagatctctcacttgaagaagaaattggaaaacgaggtggaacaaagacatacgcttacg
aggaatctagacgttcaactattagataccaagagacagctagatacagaaataaatctc
catcttaacacaaaagaactgttaaaaaatgctcagaaggacattgctacactgaaacag
caccttaataatatggaagcccagctcgcttcacagtccacacagagaaccggtaaaggt
cagcctggtgacagagatgacgttgatgatcttaaaagtcagctaaggcaggctgaagaa
caggtcaatgacttgaaggagagactcaagacaagtaccagtaatgtggagcagtatcga
gccatggtgaccagcttagaagattccctgaacaaggagaaacaggtgactgaggaggtt
cataagaacattgaagttcgcttgaaagaatcagcagagtttcagacacagttggagaag
aaattgatggaagtagagaaggaaaagcaagaacttcaggatgataagaggaaagccatc
gagagcatggaacagcaattaagtgaattgaagaaaacactgtctactgttcagaatgaa
gtacaagaagctcttcagagagcaagcacagctttaagtaatgaacagcaagccaggcgt
gactgtcaggaacaagctaaaatcgctgtggaagcccagaataagtatgagagagaattg
atgctacatgctgctgatgtcgaagctctgcaagctgccaaggaacaggtttcaaaaatg
acatcaatccgtcagcatttggaagaaacaactcagaaagcagaatcccagttgttggaa
tgtaaagcatcttgggaagagagagagagagtgttgaaggatgaagtttccaaaagtgtg
tctcgctgtgaagatctagagaaacaaaaccgactacttcatgatcaaatcgaaaaatta
agtgacaaggtggtcacctctatgaaggatgctgtgcaagcgccattaaatgtatctctc
aatgaagaagggaaatctcaagaacaaattctagaaattcttagatttattcgacgagaa
aaagaaattgctgaaactaggtttgaggtggctcaggttgagagtttgcggtatcgacaa
agagttgaacttctagaacgggagttgcaagaactgcaggatagcctgaatgtggaaagg
gaaaaggtgcaggtaactgcaaaaacaatggcgcaacatgaagagctgatgaagaaaact
gaaacaatgaacgttgttatggagaccaacaagatgctacgggaggaaaaggaaaggctc
gaacagaacctacaacaaatgcaagccaaggtgaggaaactggagttagacattttaccc
ttacaagaagccaatgctgagctgagtgagaaaagcggtatgctccaggcagaaaagaag
ctactggaagaggatgttaagcgttggaaagcacggaaccagcaactaataaatcaacag
aaagatccagacacagaagaatatcgaaagttgctttctgaaaaggaaattcacactaag
agaatccaacagctaaatgaagaagttggaaggcttaaggctgaaattgcaagatcaaat
gcatccttgactaacaaccagaatttaatccagagtctgcgggaagacttaagtaaagca
cggactgaaaaggaaggcattcagaaagatttagatgccaaaataattgatatacaggaa
aaggtcaaaacaatcactcaagtcaagaaaattggacgcaggtacaagactcagtttgaa
gaactgaaagcgcaacaaaacaaggccatggagacttccactcagtcttcaggagaccat
caggaacagcacatctctgtccaggaaatgcaggagctcaaagataccctcagccaatcc
gaaacaaagacaaagtcacttgagggtcaagtagagaatctgcagaagacattatctgaa
aaagagacagaagcaagaagtctccaggagcagacggtgcagcttcagtctgaactgtca
cgccttcgtcaggacctccaggataaaaccacagaggagcagctccgacagcaaatgaat
gaaaagacttggaagacacttgcactagccaaatcaaaaattacacatctatctggtgtg
aaagatcagctgactaaagaaattgaagaacttaaacaaaggaacggagctctagatcag
cagaaagatgagcttgatgtccgaatgactgctcttaagtcccagtatgaaggtcggatt
agtcgcttagagagagagctcagagagcatcaagagcgacaccttgagcagagggatgag
cctcaagaacccactaataaggctccagaacagcaaagacaaatcacactgaaaaccact
ccagcttctggtgaaagaggaattgccagcacatcagacccaccaacagccaatatcaag
ccaactcctgttgtttctactccaagtaaagtgacagctgcagctatggctgggaataag
tcgacacccagggcaagtatccgcccaatggttacacctgcaacggtcacaaatccgacc
actaccccaacagcaaccgtaatgcctactacacaggtggagtcacaggaagctatgcag
tcagaagggcctgtggaacatgttccagtatttggaaacgcaagtggatctgttcgttct
actagtcctaatgttcagccctccatttctcagcccatcctaactgtacagcagcaaaca
caagctacagcttttgtacaacccactcaacagagccacccgcagattgagcctacaaat
caagaattgtccccaaacatagttgaggtagtacaaagttccccagtggagcgtccatct
acttccacagcagtatttggcactgtttcagctaccccaagttcctccttgccaaagcgc
actcgggaggaggaagaggacagcaccatggaagcaggagaccaagtctctgaggacaca
gtggaaatgcctctcccgaagaagctgaagatggtcacacccgttggaaccgaggaagaa
gttatggcagaagaaagtactgatggagaggcagaaactcaagcctataatcaggactct
caagattccattggagaaggagttacccagggagattatacaccaatggaagacagtgaa
gaaacatcacaatctctacaaatcgatcttggaccacttcagtcagatcaacagactact
tcctctcaagatggtcaaggcaaaggagatgatgtaattgtaattgacagtgatgatgaa
gatgatgatgaagaaaatgatggcgaacatgaagattatgaagaagacgaagatgatgat
gatgatgaagaagatgacacggggatgggagatgagggtgaagatagtaatgaaggaact
ggtagtgcagatggtaatgatggatatgaagctgatgatgctgagggtggtgatgggact
gatccaggtacagaaacagaagaaagtatgggtggagctgaaagtcatcagagagctgct
gattctcaaaacagtggtgaaggaaatacaagtgcagcagagtcttccttctctcaggag
gttgccagggaacagcagcccacgtcagcgtctgagagacagactccgcaagcaccgcag
tcaccaaggcgccctccacatcctctccccccacgcctgaccattcacgccccacctcag
gagctgggaccaccagttcagagaattcagatgacccggaggcagtctgtagggcgtggt
cttcagttgactccaggaataggtggcatgcaacaacacttttttgatgatgaagacaga
acagtcccgagtaccccaactcttgtggtgccacatcgcactgatgggtttgctgaagct
attcattccccacaggttgccggtgttcctagattccggtttgggccacctgaagacatg
ccacagacaagttccagtcactctgatcttggccaacttgcttctcaaggaggtttggga
atgtatgaaacacccctttttctggctcatgaagaagagtctggtggccgcagcgttccc
actacgcctctccaagtagcagccccagtgactgtgttcactgagagtaccacctctgat
gcttcagaacatgcctctcagtcggttcccatggtgacaacgtctacgggcactttatcc
acgacaaacgaaacagcagcaggtgacgacggagatgaagtatttgtagaggcggagtct
gaaggtattagttcagaggcaggcctagaaattgatagccagcaggaagaggagcctgtc
caagcatctgatgaatcagatcttccctcaaccagccaagatcccccttcgagctcctcc
gtagataccagtagtagtcaaccgaagcctttcagacgagtaagacttcagacaaccttg
agacagggtgttcgtggtcgtcagtttaaccgacaaagaggtataagccatgcaatggga
ggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system