Mus musculus (house mouse): 17193
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Entry
17193 CDS
T01002
Symbol
Mbd4, Med1
Name
(RefSeq) methyl-CpG binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
17193 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
17193 (Mbd4)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
17193 (Mbd4)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
17193 (Mbd4)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
17193 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
AMP-binding
Motif
Other DBs
NCBI-GeneID:
17193
NCBI-ProteinID:
NP_034904
MGI:
1333850
Ensembl:
ENSMUSG00000030322
UniProt:
Q9Z2D7
A0A0R4J0A8
Q3UGS3
Structure
PDB
PDBj
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All DBs
Position
6:complement(115817658..115830361)
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AA seq
554 aa
AA seq
DB search
MESPNLGDNRVRGESLVPDPPWDRCKEDIAVGLGGVGEDGKDLVISSERSSLLQEPTAST
LSSTTATEGHKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGE
TFLKPEDFDFTVLPKGSINPGYKHQSLAALTSLQPNETDVSKQNLKTRSKWKTDVLPLPS
GTSESPESSGLSNSNSACLLLREHRDIQDVDSEKRRKSKRKVTVLKGTASQKTKQKCRKS
LLESTQRNRKRASVVQKVGADRELVPQESQLNRTLCPADACARETVGLAGEEKSPSPGLD
LCFIQVTSGTTNKFHSTEAAGEANREQTFLESEEIRSKGDRKGEAHLHTGVLQDGSEMPS
CSQAKKHFTSETFQEDSIPRTQVEKRKTSLYFSSKYNKEALSPPRRKSFKKWTPPRSPFN
LVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPL
GLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKY
HDWLWENHEKLSLS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaaaccttggggacaacagagtccgtggagagagcctagttccagacccg
ccttgggatcgctgcaaggaagatattgctgttggactgggaggagtgggagaagatgga
aaggacctggtgataagcagtgagcgcagctcccttctccaagagcccactgcttctact
ctgtctagtactacagcgacagaaggccacaagcctgtcccgtgtggatgggaaagagtt
gtgaagcaaaggttatctgggaaaactgcaggaaaatttgatgtatactttatcagccca
caaggattgaagttcagatcaaaacgttcacttgctaattatcttctcaaaaatggggag
acttttcttaagcctgaagattttgattttactgtactgccgaaagggagcatcaatccc
ggttataaacaccaaagtttggcagctctgacttccctgcagccaaatgaaactgacgtt
tcaaagcagaacctcaagacacgaagcaagtggaaaacagatgtgttgcctctgcccagt
ggtacttcagagtcgccagaaagcagcggactgtctaactctaactcggcttgcttgcta
ttgagagaacatagggacattcaggatgttgactctgagaagaggagaaagtccaaaaga
aaggtgactgttttgaaaggaactgcaagtcagaaaaccaaacaaaagtgcaggaagagt
ctcttagagtctactcaaagaaacagaaaaagagcatctgtggttcagaaggtgggtgct
gatcgcgagctggtgccacaggaaagtcaactcaacagaaccctctgccctgcagatgcc
tgtgcaagggagactgttggcctggctggggaagaaaaatcaccaagcccaggactggat
ctttgtttcatacaagtaacttctggcaccacaaacaaattccattcaactgaagcagca
ggtgaagcaaatcgtgagcagacttttttagaatcagaggaaatcagatcgaagggagac
agaaagggggaggcacatttgcatactggtgttttacaggatggctctgaaatgcccagc
tgctcacaagccaagaaacactttacttctgagacatttcaagaagacagcatcccacgg
acacaagtagaaaaaaggaaaacaagcctgtatttttccagcaagtacaacaaagaagct
cttagccccccaagacgcaaatccttcaagaaatggacccctcctcggtcaccttttaat
cttgttcaagaaatacttttccatgacccatggaagctcctcatcgcgactatatttctc
aatcggacctcaggcaagatggccatccctgtgctgtgggagtttctagagaagtaccct
tcagctgaagtggcccgagctgccgactggagggacgtgtcggagcttctcaagcctctt
ggtctctacgatctccgtgcaaaaaccattatcaagttctcagatgaatatctgacaaag
cagtggaggtatccgattgagcttcatggcattggtaaatatggcaacgactcctaccgg
atcttttgtgtcaatgaatggaagcaggtgcaccctgaagaccacaagttaaataaatac
catgactggctttgggagaatcatgaaaaattaagtctatcttga
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