Mus musculus (house mouse): 17749 Help Entry 17749             CDS       T01002                                  Symbol Polr2k, ABC10-alpha, MafY, Mt1a, RPABC4, RPB10alpha, RPB12, RPB7.0 Name (RefSeq) polymerase (RNA) II (DNA directed) polypeptide K   KO K03009   DNA-directed RNA polymerases I, II, and III subunit RPABC4 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu03420   Nucleotide excision repair mmu04623   Cytosolic DNA-sensing pathway mmu05016   Huntington disease Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     17749 (Polr2k)   09124 Replication and repair    03420 Nucleotide excision repair     17749 (Polr2k)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     17749 (Polr2k)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     17749 (Polr2k)    03400 DNA repair and recombination proteins [BR:mmu03400]     17749 (Polr2k) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol I, II, III common subunits      17749 (Polr2k)   RNA polymerase III system    RNA polymerase III      17749 (Polr2k)   RNA polymerase I system    RNA polymerase I      17749 (Polr2k) DNA repair and recombination proteins [BR:mmu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       17749 (Polr2k) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Zn_ribbon_RPAB4 DmmA-like_C MCM_OB A2L_zn_ribbon Cytochrome_C7 DUF5816 HypA DZR Zn_ribbon_13 Motif Other DBs NCBI-GeneID:  17749 NCBI-ProteinID:  NP_075616 MGI:  102725 Ensembl:  ENSMUSG00000045996 UniProt:  Q63871 Q8BFX0 Q545V5 LinkDB All DBs Position 15:36174156..36177158 Genome browser AA seq 58 aa AA seqDB search MDAQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR NT seq 177 nt NT seq  +upstreamnt  +downstreamnt atggacgctcagaaagatgttcaaccaccaaagcagcagccaatgatatatatttgtgga gagtgtcacaccgaaaatgagataaagtccagggatcccatcagatgcagagaatgtgga tacagaataatgtacaagaaaaggactaaaagattggtggtttttgatgctcgatga

Mus musculus (house mouse): 20016 Help Entry 20016             CDS       T01002                                  Symbol Polr1c, 40kDa, Polr1e, RPA40, Rpo1-1 Name (RefSeq) polymerase (RNA) I polypeptide C   KO K03027   DNA-directed RNA polymerases I and III subunit RPAC1 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     20016 (Polr1c)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     20016 (Polr1c) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      20016 (Polr1c)   RNA polymerase I system    RNA polymerase I      20016 (Polr1c) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_L RNA_pol_A_bac Motif Other DBs NCBI-GeneID:  20016 NCBI-ProteinID:  NP_033111 MGI:  103288 Ensembl:  ENSMUSG00000067148 UniProt:  P52432 LinkDB All DBs Position 17:complement(46554846..46558971) Genome browser AA seq 346 aa AA seqDB search MAAAQAVEEMRTRVVLGEFGVRNVHTTDFPGNYAGYDDAWDQNRFEKNFRVDVVQMDEDT LEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPR LFEYRNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVYTRHMTWVPLGN QADVFPEGTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHAKFSPVATASYRLLPAIT LLEPVEGEAAEELSQCFSPGVIEVEEVQGKKVARVANARLDTFSREIFRHEKLKKAVRLA RVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLDELDAVEMD NT seq 1041 nt NT seq  +upstreamnt  +downstreamnt atggcggcggctcaggcggtggaggagatgcggactcgcgtggttctcggagagtttggg gttcgcaatgtccacaccacggactttcccggtaactacgccggttatgatgatgcctgg gaccagaaccgcttcgagaagaatttccgtgtggacgtggtgcaaatggatgaagacacg ctggagttcgacatggtggggattgatgctgccatcgccaatgctttccggagaatcctg ttagctgaggtgccgacaatggccgtggagaaggtcttggtgtataacaacacgtccata gtccaggatgagatccttgctcaccgcctggggctcatccccatcctcgctgatcctcgt ctctttgaatatcggaaccaaggagaggaggaaggaacagagatagacacgctgcagttc cggctgcaggtcaggtgtaccaggaaccccaatgctgccaaggattcctcagaccccaat gaactctatgtcaaccataaagtctacaccaggcatatgacatgggtccccttgggaaat caggctgatgtcttcccagagggcacaatccgtccagtgcacgacgacatcctcatcgct cagcttcggcctggccaggaaattgacttgatgatgcattgcgtcaagggcattggcaaa gaccatgccaagttctcaccagtggccacagccagctacagactgctaccggccatcact ctgcttgagcctgtggaaggagaagcggctgaggagctgagccagtgtttctcccctggc gtgattgaggtggaggaagtacaaggtaaaaaggtggccagggtggccaatgctcggctg gataccttcagcagggaaatcttccggcatgagaaactcaagaaggctgtgcggcttgcc cgggttcgggaccattatatcttttctgtggagtctactggagttttgccaccagatgtg ttggtgagtgaagccatcaagatcctgatggggaagtgccggcggttcttggatgaactg gatgcagttgagatggactga

Mus musculus (house mouse): 20018 Help Entry 20018             CDS       T01002                                  Symbol Polr1d, 1110003G10Rik, AC19, RPA16, Rpo1-3 Name (RefSeq) polymerase (RNA) I polypeptide D   KO K03020   DNA-directed RNA polymerases I and III subunit RPAC2 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     20018 (Polr1d)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     20018 (Polr1d) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      20018 (Polr1d)   RNA polymerase I system    RNA polymerase I      20018 (Polr1d) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_L_2 RNA_pol_L Motif Other DBs NCBI-GeneID:  20018 NCBI-ProteinID:  NP_033113 MGI:  108403 Ensembl:  ENSMUSG00000029642 UniProt:  P97304 Q545W2 LinkDB All DBs Position 5:147013525..147048171 Genome browser AA seq 133 aa AA seqDB search MEDDQELERKISGLKTSMAEGERKTALEMVQAAGTDRQCVTFVLHEEDHTLGNCLRYIIM KNPEVEFCGYTTTHPSESKINLRIQTRGALPAVEPFQKGLNELLNVCQHVLVKFEASIKD YKAKKASKKEPTF NT seq 402 nt NT seq  +upstreamnt  +downstreamnt atggaagacgatcaggagctggagagaaaaatatcaggattgaagacctcaatggctgaa ggcgagaggaagacagccctggaaatggtccaggcagctggaacagatagacagtgtgtg acatttgtcctgcacgaggaggaccatacactaggaaactgtctgcggtacataatcatg aagaacccggaagtggaattttgtggttacactacgacccatccttcagagagcaaaatt aatttgcgaattcagacccggggtgcccttccagctgttgagccgtttcagaaaggcctg aatgagctcttgaatgtctgccagcatgtgcttgtcaagtttgaggccagcataaaggac tataaagctaaaaaggcaagcaaaaaggagcccacattctag

Mus musculus (house mouse): 218832 Help Entry 218832            CDS       T01002                                  Symbol Polr3a, 9330175N20Rik, RPC1, RPC155 Name (RefSeq) polymerase (RNA) III (DNA directed) polypeptide A   KO K03018   DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     218832 (Polr3a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     218832 (Polr3a) Enzymes [BR:mmu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      218832 (Polr3a) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Core subunits      218832 (Polr3a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  218832 NCBI-ProteinID:  NP_001074716 MGI:  2681836 Ensembl:  ENSMUSG00000025280 UniProt:  B2RXC6 LinkDB All DBs Position 14:complement(24498762..24537126) Genome browser AA seq 1390 aa AA seqDB search MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE EKQQFLDFLKRPGLTYLQKRGLKKKISDKCRKKSTCHYCGAFNGTVKKCGLLKIIHEKYK TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM NPESGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANF IQQRHMQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMCGSMDKGTLGSGSK NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVYPCQTEPALSKNDLTLTAEAIMKKNEFLC CQDSFLQEIKTFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV VQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPKPPRRPLIFD THEFHIPLVT NT seq 4173 nt NT seq  +upstreamnt  +downstreamnt atggtgaaggagcagttccgcgagacggatgtggctaagaaaataagccatatctgtttt ggaatgaagtcccctgaggagatgcgccagcaggcacatatccaggttgtcagtaagaac ctgtacagccaagacaacaaccacgcccccttgttgtatggagtgcttgaccatagaatg ggtacgagcgaaaaagatcgtccttgtgagacctgtgggaagaacttggcggactgtctc ggccactatggctacattgatctcgagctaccgtgctttcatgtcgggtacttcagggct gtcattggtatcttacagatgatctgcaaaacctgctgccacattatgctgtcccaggaa gagaagcagcagtttctagattttctgaagaggcctggcctaacctacctgcagaagcga ggcctgaagaagaagatctcagataaatgccggaagaaaagcacttgtcactactgtggt gcctttaatggtaccgtaaagaaatgtggtttactgaagataattcatgaaaaatacaag acaaacaaaaaagtcgtggatcccattgtatcaaacttcctgcagtcctttgagacagcc attgagcataacaaagaggttgaacccctgctgggaagggcccaggagaacttgaatcct ttagtagttctgaacttgtttaagcgcatcccagctgaagatgtcccgttactcctgatg aacccagaatctggaaagccctctgatttgattctcacccgacttttggtgcctcccctg tgtatcagaccgtccgtcgtgagtgatctgaagtctggaaccaatgaagatgacctgaca atgaaactgacagagatcattttcctaaatgatgttattaaaaagcaccggatctccgga gccaagacgcagatgatcatggaggactgggatttcctgcagctgcagtgtgccctctac atcaacagtgagctctctggcatccctctcaacatggcacctaagaaatggacgcgaggc tttgtgcagcgcctgaaggggaaacagggtcgatttagaggtaatctgtcagggaagagg gtggatttctccggccgaacagtcatctcacctgaccccaacctccggattgatgaagta gccgtgccagttcatgtggccaaaattctaacttttcctgagaaggtgaacaaagcaaac atcaactttttgaggaaactggttcgaaatggcccagatgttcacccaggagccaatttt atccaacaaagacacatgcagatgaagaggttcctgaagtatggaaatcgggaaaagatg gctcaggagctcaagttcggcgacattgtagagagacacctgatagatggagatgtggtc ttgttcaaccggcagccctccctgcacaaactgagcatcatggcccacctggccagggtt aagccccaccggaccttcagattcaatgaatgtgtctgcaccccctacaatgcagacttt gatggggatgaaatgaaccttcatcttccccagacagaggaagccaaagcagaggccctt gttctcatggggaccaaagcgaaccttgtaaccccacgaaatggggagccactcattgct gccattcaggacttcttaacaggtgcttacctcctcaccctcaaggacaccttctttgac cgagccaaggcttgccagatcatcgcttcaatactggttggcaaagatgaaaaaattaaa gtgcgcctcccaccccctacaatactaaagcctgtcaccctgtggaccggaaagcagatc ttcagtgtcatcctcagacctagtgatgacaatccagtgcgggccaacctccgaaccaag ggcaagcagtactgtggcaagggggaagacctctgcgtcaacgactcctatgtcaccatc cagaacagtgagttgatgtgcggcagcatggacaaagggaccctggggtcggggtccaag aacaacatcttctacatcttgctacgagactgggggcagaatgaggctgccgatgccatg tctcggcttgccaggctggctcctgtctacctgtctaaccgtgggttctccatcgggatt ggtgatgtcacgcctggccagggactgctgaaagccaagtatgagctactaaatgctggc tacaaaaaatgtgacgagtacattgaagccctgaacacaggcaagctgcagcagcagcca ggctgcacggccgaggagacgcttgaggctctgatcctgaaggagctgtctgtgatccgg gaccatgctggcagtgcctgcctccgcgagctggacaagagcaacagccccctcaccatg gccctgtgtggctccaaaggttccttcataaacatatcacagatgattgcctgtgtggga cagcaagccatcagtggctcccgggttccagatggctttgagaacagatctttgcctcac tttgagaagcattcaaagctccctgctgccaaaggctttgtggccaatagcttttactct ggcttaacgcctactgagtttttcttccacacaatggccggtcgggagggtctggtggac acagctgtaaagactgctgaaacaggatacatgcagagaagactggtcaaatccctggaa gacctctgctcgcagtacgatctgacagtgcggagctccaccggtgacatcatccagttc atctatggaggagatggcttagatcctgctgccatggagggcaaagacgaaccgctggag tttaagcgggttctggacaacatcaaggcagtgtatccatgtcagactgaacctgctctc agtaagaacgacctcaccttgaccgctgaggccatcatgaagaagaatgagttcctatgc tgccaagacagcttcctgcaggaaataaaaacattcattaaaggggtgtccgagaagatt aagaaaaccagagataaatatgggatcaatgataacggcacaacagagcctcgtgtgctg taccagttggaccgtattacccctacccaaatagagaagtttctggagacctgtagggat aagtatatgagagcacagatggagccaggctctgcggtaggtgcactctgtgcacagagc attggtgagcccggcacccagatgacgctgaagacattccactttgcaggagtagcctcc atgaacatcaccctgggtgtgcctcggatcaaagagatcatcaacgcttccaaggccatc agcactccaattatcacagcacagctagacaaggatgacgacgcggattatgcacgcctg gtgaagggcaggattgagaaaaccctcctgggggagatctcagagtatattgaagaagtg tttcttcctgatgactgctttattcttgtcaagctctccctggaacggatccgacttctg agactggaggtcaatgctgagacagtgcggtactccatctgcacatccaagctccgagtg aagcctggtgatgtggccgttcatggggaggctgtggtgtgtgtcacccccagggaaaac agcaagagctccatgtattatgtgctgcagtttctcaaagaggatctgcccaaggtggtt gtacaaggcatcccagaggtgtcgcgagctgtcatccatattgacgagcagagtgggaag gagaagttcaagcttctggtggaaggtgacaacctgcgggcagtcatggccacccacggt gtgaaaggcacccggaccacgtctaataacacctatgaggtggaaaaaaccctgggcatt gaggctgcccggacaactatcatcaacgagatccagtacacgatggtcaaccacggcatg agcatcgacaggaggcacgtgatgctgctctctgacctgatgacctacaagggtgaagtc ctgggtataaccaggtttggcctggccaagatgaaggagagtgtgttgatgctggcctcc tttgaaaagacagctgaccatctctttgatgctgcctactttgggcagaaagactctgta tgcggagtgtctgagtgcatcatcatgggaatcccgatgaacatcggaactgggctcttc aagctgttacacaaagccaacagggaccccaaaccacccaggagacccctgatatttgac acacatgaattccacatccctcttgttacatag

Mus musculus (house mouse): 245841 Help Entry 245841            CDS       T01002                                  Symbol Polr2h Name (RefSeq) polymerase (RNA) II (DNA directed) polypeptide H   KO K03016   DNA-directed RNA polymerases I, II, and III subunit RPABC3 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu03420   Nucleotide excision repair mmu04623   Cytosolic DNA-sensing pathway mmu05016   Huntington disease Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     245841 (Polr2h)   09124 Replication and repair    03420 Nucleotide excision repair     245841 (Polr2h)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     245841 (Polr2h)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     245841 (Polr2h)    03400 DNA repair and recombination proteins [BR:mmu03400]     245841 (Polr2h) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol I, II, III common subunits      245841 (Polr2h)   RNA polymerase III system    RNA polymerase III      245841 (Polr2h)   RNA polymerase I system    RNA polymerase I      245841 (Polr2h) DNA repair and recombination proteins [BR:mmu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       245841 (Polr2h) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb8 RNA_pol_RpbG Motif Other DBs NCBI-GeneID:  245841 NCBI-ProteinID:  NP_663607 MGI:  2384309 Ensembl:  ENSMUSG00000021018 UniProt:  Q923G2 LinkDB All DBs Position 16:20536552..20541015 Genome browser AA seq 150 aa AA seqDB search MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG LLMRLQGDANNLHGFEVDSRVYLLMKKLAF NT seq 453 nt NT seq  +upstreamnt  +downstreamnt atggcgggcatcctgttcgaggatattttcgatgtgaaagacatcgacccagaaggcaag aaatttgaccgagtatcccggctgcactgtgagagtgaatctttcaagatggacctcatc ttagatgtaaacattcagatttaccctgtggacttaggtgacaagttccggttggttata gctagtactttgtatgaagatggtaccttggatgatggtgaatacaaccccacagatgac aggccttccagggctgaccagtttgagtatgtcatgtatgggaaagtgtacaggatcgaa ggggatgagacctccactgaagcagccacacgcctctctgcgtacgtgtcctatgggggc ctgctcatgaggcttcagggtgatgccaacaacctgcatggatttgaggtggactccaga gtttatctgctgatgaagaagctggccttctga

Mus musculus (house mouse): 26939 Help Entry 26939             CDS       T01002                                  Symbol Polr3e, RPC5, Sin Name (RefSeq) polymerase (RNA) III (DNA directed) polypeptide E   KO K14721   DNA-directed RNA polymerase III subunit RPC5 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     26939 (Polr3e)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     26939 (Polr3e) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Pol III specific subunits      26939 (Polr3e) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RPC5 RPC5_C Zn_ribbon_TFIIB Motif Other DBs NCBI-GeneID:  26939 NCBI-ProteinID:  NP_079574 MGI:  1349452 Ensembl:  ENSMUSG00000030880 UniProt:  Q9CZT4 Q3TWE8 LinkDB All DBs Position 7:120516960..120546658 Genome browser AA seq 710 aa AA seqDB search MANEEDDPVIQEIDVYLAKSLAEKLYLFQYPVRPASMTYDDIPHLSAKIKPKQQKVELEM AIDTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTARYAAALYR QGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRP ESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGMRDSRSEHERQYLLCQGSSGVENTELVK SPSEYLMMLMPPSPEEEKDKPVAPSNVLSMAQLRTLPLADQIKVLMKNVKVMPFANLMSL LGPSVDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGMPAEVLCRGRDFVMWKF TQSRWVVRKEVAAVTKLCAEDVKDFLEHMAVVRINKGWEFLLPYDLEFIKKHPDVVQRQH MLWSGIQAKLEKVYNLVKETMPKKPDGQSAPVGLVSGEQRVQTAKTKAQQNHAFLERELQ RRKEQMRAATVLPSVQIKEEPLSEEEADGAELEAEEEEPMDTAPSTCLSTKLANGLPAGR AVGGDSLNGHPVPGCASNPVACELKAFVEATFQRQFVLTLSELKRLFNLHLAGLPPGHIL FSGVSDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQHRQVLLEIFS KNYRVRRNLIQSRLTQECGEELSKQEVDKVLKDCCVSCGGMWYLKGTVQS NT seq 2133 nt NT seq  +upstreamnt  +downstreamnt atggccaatgaagaagatgacccagtcatacaggagatcgatgtgtacttggctaaaagt ctggcagagaagctgtatctctttcagtatcctgtgcgtcctgcttcaatgacctatgat gacattccacatctctcagccaagatcaagcccaaacagcagaaggtagagcttgagatg gccatcgacaccctgaatcccaactactgccgcagcaaaggggagcagatcgcactgaac gtggacggtgcctgtgctgacgagactagcacatattcctcaaagctgatggacaagcag accttctgctcctcccagaccaccagcaacacagctcgttatgccgctgcactctacagg caaggtgagctccacctgacacctttacatggcatcctacagcttcggcccagcttctcc taccttgataaggcagatgccaagcaccgagagagggaggcagccaatgaggcaggggat tcttctcaggacgaggcagaagaagacgttaagcagatcacggtacggttctccaggcca gagtccgagcaggctcgccagcgccgcgtgcagtcctatgagttcttgcagaagaagcat gcagaagaaccctgggtccacctgcactactatggcatgagggacagccgctcagagcat gagcgccagtacctgctgtgtcagggatccagcggggtagagaacacggagctcgtcaag tcacccagtgaatacctcatgatgctcatgccgcccagcccagaggaggagaaggacaag cctgtggctcccagcaatgtcttatctatggcccagctgcgtacattgcctctggctgat cagattaaggtcctgatgaagaacgtgaaagtcatgcccttcgctaatctcatgagcctc ctgggcccctctgtggactctgtggctgttctacgtggcatccagaaggtggcgatgtta gtccaaggaaactgggtggtaaagagtgacatcctgtatcccaaggattcttccagccct cacagtggcatgcctgctgaggtgctctgcaggggccgagactttgttatgtggaagttc acacagagccgatgggtggtaagaaaggaggtggcagcagtgaccaaactctgcgctgag gatgtgaaggactttctggagcacatggctgtagtgagaatcaacaaaggctgggagttc ttactgccttacgacctggagtttatcaagaagcatccagatgtggtccagcggcagcac atgctgtggtcgggcatccaggccaaattagaaaaagtctataatctcgtaaaagaaacc atgccaaagaagccggatggacaatcagcgcctgttggtctggtctctggggaacagcgg gtccaaacagccaaaaccaaggcccagcagaaccatgccttcttggagcgtgaactgcag cgacggaaggagcagatgcgggcagccacagtcctgcccagcgtgcagatcaaggaggaa cccctgagtgaggaggaagccgatggggctgagctggaggctgaggaagaggagcccatg gacactgcacccagcacttgcctcagcaccaagttggccaatgggctgcctgctgggcgg gcagtgggtggggacagcctaaatggacacccagttccaggctgtgccagcaacccggtt gcctgtgaactgaaggcttttgtggaagccacctttcagagacagtttgtgctcacgctg agcgaactcaagcgcctcttcaacctgcacctggcaggcctgcccccgggccatatactc ttcagtggcgtctcagaccgaatgctacaggatacggtgctggccgctggctgcaagcag atactggtgccttttcccccacagactgctgcttcccctgatgagcagaaggtatttgcc ctctgggagtctggagacatgagtgaccagcatcggcaggttttgcttgaaatattttcc aaaaattaccgagtacgtcggaacttgatccagtctcggctgactcaagaatgtggagaa gagctaagcaaacaggaggtggataaagtgctaaaggactgttgtgtaagctgtggtggc atgtggtaccttaaggggacagtacaatcctga

Mus musculus (house mouse): 66420 Help Entry 66420             CDS       T01002                                  Symbol Polr2e, 2410021N14Rik, 25kDa, RPB5, XAP4 Name (RefSeq) polymerase (RNA) II (DNA directed) polypeptide E   KO K03013   DNA-directed RNA polymerases I, II, and III subunit RPABC1 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu03420   Nucleotide excision repair mmu04623   Cytosolic DNA-sensing pathway mmu05016   Huntington disease Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     66420 (Polr2e)   09124 Replication and repair    03420 Nucleotide excision repair     66420 (Polr2e)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     66420 (Polr2e)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     66420 (Polr2e)    03400 DNA repair and recombination proteins [BR:mmu03400]     66420 (Polr2e) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol I, II, III common subunits      66420 (Polr2e)   RNA polymerase III system    RNA polymerase III      66420 (Polr2e)   RNA polymerase I system    RNA polymerase I      66420 (Polr2e) DNA repair and recombination proteins [BR:mmu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       66420 (Polr2e) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 Motif Other DBs NCBI-GeneID:  66420 NCBI-ProteinID:  NP_079830 MGI:  1913670 Ensembl:  ENSMUSG00000004667 UniProt:  Q80UW8 Q3V214 LinkDB All DBs Position 10:complement(79871787..79875493) Genome browser AA seq 210 aa AA seqDB search MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVA RYFGIKRGQVVKIIRPSETAGRYITYRLVQ NT seq 633 nt NT seq  +upstreamnt  +downstreamnt atggacgacgaggaggagacctaccggctgtggaagatccgcaagacgatcatgcagctg tgtcatgaccgtggctacctggtgacccaggatgaactggaccagacacttgaggaattc aaggcgcagtttggggacaagcccagcgaaggacggccaaggcgcacagacctcacggtg ctggtggcccacaacgatgaccccacagaccagatgtttgtgttcttcccagaggagccc aaggtgggcatcaagaccatcaaggtatactgccagcgcatgcaggaggaaaacatcaca cgggcgctgattgtggtgcagcagggcatgacgccctccgccaagcagtccctggtggac atggccccgaagtatgtgctggaacagtttctacagcaggagctgctcatcaatatcaca gagcacgagctagtccctgagcacgtggtcatgacaaaggaggaggtgactgaactgctg gctcgatacaagcttcgtgagagccagctacccagaatccaggccggggacccagtggca cggtactttgggatcaagcgagggcaggtcgtgaagatcatccgccccagtgagacggct ggccgctacatcacctaccgcctggtgcagtag

Mus musculus (house mouse): 66491 Help Entry 66491             CDS       T01002                                  Symbol Polr2l, 2510029B14Rik Name (RefSeq) polymerase (RNA) II (DNA directed) polypeptide L   KO K03007   DNA-directed RNA polymerases I, II, and III subunit RPABC5 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu03420   Nucleotide excision repair mmu04623   Cytosolic DNA-sensing pathway mmu05016   Huntington disease Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     66491 (Polr2l)   09124 Replication and repair    03420 Nucleotide excision repair     66491 (Polr2l)  09160 Human Diseases   09164 Neurodegenerative disease    05016 Huntington disease     66491 (Polr2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     66491 (Polr2l)    03400 DNA repair and recombination proteins [BR:mmu03400]     66491 (Polr2l) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol I, II, III common subunits      66491 (Polr2l)   RNA polymerase III system    RNA polymerase III      66491 (Polr2l)   RNA polymerase I system    RNA polymerase I      66491 (Polr2l) DNA repair and recombination proteins [BR:mmu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       66491 (Polr2l) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_N Motif Other DBs NCBI-GeneID:  66491 NCBI-ProteinID:  NP_079869 MGI:  1913741 Ensembl:  ENSMUSG00000038489 UniProt:  P62876 LinkDB All DBs Position 7:complement(141051773..141055066) Genome browser AA seq 67 aa AA seqDB search MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL NYAPLEK NT seq 204 nt NT seq  +upstreamnt  +downstreamnt atgatcatcccggtgcgctgcttcacctgcgggaagatcgtcggcaacaaatgggaagcc tacctgggtctgctgcaggccgagtacacggagggggatgccctggacgctctgggccta aagcgctactgctgccgccgcatgctgctagcacacgtggacctgattgagaagctgctg aactatgcacccctagagaagtga

Mus musculus (house mouse): 67005 Help Entry 67005             CDS       T01002                                  Symbol Polr3k, 12.3kDa, 1500004O14Rik, C11, RPC10, RPC11 Name (RefSeq) polymerase (RNA) III (DNA directed) polypeptide K   KO K03019   DNA-directed RNA polymerase III subunit RPC11 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     67005 (Polr3k)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     67005 (Polr3k) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Pol III specific subunits      67005 (Polr3k) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Zn_ribbon_TFIIS Zn_ribbon_RPB9 Lar_restr_allev RUBY_RBDX zf-SAP30 Baculo_LEF5_C Zn_ribbon_recom Motif Other DBs NCBI-GeneID:  67005 NCBI-ProteinID:  NP_080177 MGI:  1914255 Ensembl:  ENSMUSG00000038628 UniProt:  Q9CQZ7 Q3TSW1 LinkDB All DBs Position 2:181506153..181512623 Genome browser AA seq 108 aa AA seqDB search MLLFCPGCGNGLIVEEGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGAAAWE NVDSTAEPCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD NT seq 327 nt NT seq  +upstreamnt  +downstreamnt atgctgttgttctgcccgggctgcgggaacggactcattgtggaggaggggcagcgttgc catcgcttcgcctgcaacacttgcccctacgtccataatatcacccgtaaggtaacaaac cgaaagtatccaaagctaaaagaagtggacgacgtgcttggtggagcagctgcatgggag aatgtggactctactgcagagccatgtccaaaatgcgaacatccccgtgcctacttcatg cagcttcagacgcgttctgcagacgagccaatgaccaccttctataagtgctgcaatgct cagtgtggacatcgctggagggattaa

Mus musculus (house mouse): 67065 Help Entry 67065             CDS       T01002                                  Symbol Polr3d, 2810426M17Rik, 44kDa, BN51T, RPC4, TSBN51 Name (RefSeq) polymerase (RNA) III (DNA directed) polypeptide D   KO K03026   DNA-directed RNA polymerase III subunit RPC4 Organism mmu  Mus musculus (house mouse) Pathway mmu03020   RNA polymerase mmu04623   Cytosolic DNA-sensing pathway Brite KEGG Orthology (KO) [BR:mmu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     67065 (Polr3d)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmu03021]     67065 (Polr3d) Transcription machinery [BR:mmu03021]  Eukaryotic type   RNA polymerase III system    RNA polymerase III     Pol III specific subunits      67065 (Polr3d) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpc4 Motif Other DBs NCBI-GeneID:  67065 NCBI-ProteinID:  NP_001157554 MGI:  1914315 Ensembl:  ENSMUSG00000000776 UniProt:  Q91WD1 LinkDB All DBs Position 14:complement(70676188..70680911) Genome browser AA seq 398 aa AA seqDB search MSEGNAAGEPSNPGGPRPLLSGGRGLIGRRPAPPLTPGRLPSIRSRDLTLGGVKKKTFTP NIISRKIKEEPKEEVTMKKEKRERDRDRQREGHGRGRGRPEVIQSHSIFEQGPAEMMKKK GNWDKTVDMSDMGPSHIINIKKEKRETDEETKQILRMLEKDDFIDDPGLKNDTRNMPVQL PLAHSGWLFKEESEEPEAKPFSAGPKEEDMEVDVPAVKVKEEPRDEEEEAKVKAPPRAAR KTPGLPKDVSVAELLRELSLMKDEELLFLQLPDTLPGQPPTQDIKPVKTEVQGEDGQMVV IKQEKDREARLAENACTLADLTEGQVGKLLIRKSGKVQLLLGKVTLDVTMGTTCSFLQEL VSVGLGDSRTGEMTVLGHVKHKLVCSPDFESLLDHKHR NT seq 1197 nt NT seq  +upstreamnt  +downstreamnt atgtcggaaggaaacgcggcgggcgagcccagcaatcctggagggccgcgaccccttctc tctgggggccgggggctgatcggccggcggcccgcacccccgcttacgcccggtcgcctt ccctccatccgctcccgggacctcacccttggcggagtcaagaagaaaaccttcacccca aatatcatcagtcggaagatcaaagaagagccaaaagaagaagtgactatgaagaaggaa aagcgtgaacgggacagggaccgccagcgtgagggtcacggacggggacgtggccgcccg gaagtgatccagtcccattctatcttcgagcagggtccggcagaaatgatgaaaaaaaaa gggaactgggataagaccgtggacatgtccgacatgggaccttctcatatcatcaacatc aaaaaagagaagagagaaacagacgaagagaccaagcagatcctgcgcatgctggagaag gatgacttcatcgatgacccggggctaaagaatgacacacggaacatgccagtgcagctg cctctggctcattcagggtggctttttaaggaggagagtgaagagccagaggctaagcct ttttcggctggccccaaggaagaagatatggaggtggacgtgcctgccgtcaaagtgaaa gaggagccacgagatgaggaagaggaagccaaggtgaaagcccctccaagagcagcccgg aagactcctggcctcccaaaggacgtgtcggtggccgagctgctcagagagctgagcctc atgaaggatgaggagctcctgttccttcagctgcctgacaccctccccgggcagccaccc actcaggacatcaagcctgtcaagacagaggtgcagggcgaggatggacagatggtagtc ataaagcaggaaaaagaccgggaagccaggctagcagagaatgcttgtaccttggctgac ctgacagagggtcaagtgggcaaactgctcatccgtaagtcagggaaggtgcaactcctc ctgggcaaggtgactctagatgtgaccatgggaacgacctgttctttcctgcaggaactg gtgtctgtgggccttggagacagcagaacaggggagatgacagtcctgggacatgtgaag cacaaacttgtatgttctcctgattttgaatctctcttggatcacaaacaccggtga

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