KEGG   Mus musculus (house mouse): 17749
Entry
17749             CDS       T01002                                 
Symbol
Polr2k, ABC10-alpha, MafY, Mt1a, RPABC4, RPB10alpha, RPB12, RPB7.0
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide K
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu04623  Cytosolic DNA-sensing pathway
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17749 (Polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    17749 (Polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    17749 (Polr2k)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    17749 (Polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    17749 (Polr2k)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    17749 (Polr2k)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     17749 (Polr2k)
  RNA polymerase III system
   RNA polymerase III
     17749 (Polr2k)
  RNA polymerase I system
   RNA polymerase I
     17749 (Polr2k)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17749 (Polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DmmA-like_C MCM_OB A2L_zn_ribbon DUF5816 Cytochrome_C7 HypA DZR Zn_ribbon_13
Other DBs
NCBI-GeneID: 17749
NCBI-ProteinID: NP_075616
MGI: 102725
Ensembl: ENSMUSG00000045996
UniProt: Q63871 Q8BFX0 Q545V5
LinkDB
Position
15:36174156..36177158
AA seq 58 aa
MDAQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggacgctcagaaagatgttcaaccaccaaagcagcagccaatgatatatatttgtgga
gagtgtcacaccgaaaatgagataaagtccagggatcccatcagatgcagagaatgtgga
tacagaataatgtacaagaaaaggactaaaagattggtggtttttgatgctcgatga

KEGG   Mus musculus (house mouse): 20020
Entry
20020             CDS       T01002                                 
Symbol
Polr2a, 220kDa, Rpb1, Rpo2-1
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide A
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    20020 (Polr2a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    20020 (Polr2a)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    20020 (Polr2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    20020 (Polr2a)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    20020 (Polr2a)
Enzymes [BR:mmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     20020 (Polr2a)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     20020 (Polr2a)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      20020 (Polr2a)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_R RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 20020
NCBI-ProteinID: NP_001277997
MGI: 98086
Ensembl: ENSMUSG00000005198
UniProt: P08775
LinkDB
Position
11:complement(69624823..69649459)
AA seq 1970 aa
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq 5913 nt   +upstreamnt  +downstreamnt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctgagtccggatgaattgaagcggatgtctgtgacagagggtggt
atcaaatacccagaaacaacggagggaggtcgccccaaacttgggggactaatggatcca
cggcagggggtgattgagcggactggccgctgccaaacatgtgcaggaaacatgaccgag
tgtcctggccactttggccacatcgaattggccaaacctgtgtttcatgtgggcttcctg
gtgaagacaatgaaggttttgcgctgtgtctgcttcttctgctccaaactgcttgtagat
tctaataacccgaagattaaggacatcctggccaaatctaaggggcagccaaagaaacgg
cttacgcatgtctatgacctgtgcaagggcaaaaacatctgtgaaggtggagaggagatg
gacaacaagtttggtgtggagcagccggagggtgatgaggatctgaccaaagagaagggc
catggcggctgtgggcggtaccaaccccgaatccggcgctctggcctagagttgtatgct
gaatggaagcatgttaatgaggactctcaggagaaaaagatcttgctgagtccagaacga
gtgcatgaaatcttcaaacgcatctcagatgaggagtgttttgtgttgggcatggagcct
cgctatgcccggcctgagtggatgattgtcacagtgttgcctgtgcctcctctctcagtg
agacctgctgtggtgatgcagggttctgctcgaaaccaggatgatctgactcacaaactg
gctgacattgtgaagatcaacaatcagctgcggcggaacgagcagaatggtgcagctgcc
catgtcatagcagaagatgtaaaacttctccagttccatgtggccaccatggtggacaat
gaactgcccggcttaccccgtgccatgcagaagtctggccgtcccctcaagtccctgaag
caacggttgaagggcaaagaaggacgggttcgagggaatctaatgggcaagcgagtggac
ttctcagcccgcactgtcatcacccctgaccctaacctatccattgaccaagtgggtgtg
ccccgctccattgctgccaacatgacctttgcagagattgtcacacccttcaatattgac
agacttcaggaattagtacgcaggggaaacagccagtatccaggagccaagtacatcatc
cgcgataatggcgatcgaattgacttgcgtttccatcctaagcccagtgaccttcatctg
cagactggctataaggtggaacggcacatgtgtgatggggacattgttatcttcaatcgt
cagccaactttgcacaaaatgtccatgatggggcatcgggtccgaatcctcccctggtct
acttttcggttgaatcttagtgtgacaactccatacaatgcagactttgatggagatgag
atgaatttgcatctgccacagtctctggaaacacgggcagagatccaagagttggctatg
gtgcctcgaatgattgtcaccccccagagcaatcgacctgtcatgggtattgtgcaagac
acactcacggcagtacgcaaattcactaagagagatgtcttcctggagcggggtgaagtc
atgaacctcttaatgtttctgtccacgtgggatggcaaggtcccacaaccagctatcctc
aagccccggcccctgtggacaggcaagcagatcttctccctcatcatacctggacacatc
aattgtatccgtacccacagcacccatcctgatgatgaagatagtggcccttacaagcac
atctctcctggggacaccaaagttgtagtggagaatggggagcttatcatgggcatcctt
tgtaagaagtccctgggcacctcagcaggctcgctggtccatatctcctacctggagatg
gggcatgacatcacccgcctcttctactccaacattcagactgtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccattgcagattcaaagacttaccag
gacattcagaacactattaagaaagctaaacaagatgtaatagaggtcattgagaaggct
cataacaatgagctagaacccactccaggaaacacattgcgtcagacatttgagaatcaa
gtgaatcgtattctcaatgatgctcgagacaaaactggctcctctgcacagaaatccctc
tctgaatataacaacttcaagtctatggtggtgtctggagccaagggttccaagatcaac
atctcccaggtcattgctgttgtcgggcagcagaatgtagagggcaagcggatcccattt
ggattcaagcatcggactcttcctcactttatcaaggatgattatggtcctgagagccga
ggctttgtagaaaattcatacttggctggtctcacacccactgagttcttcttccatgcc
atgggaggacgagaaggtctcattgacacggctgttaagactgctgagactgggtatatt
cagcgaaggctgataaagtccatggagtcggtgatggtgaaatatgatgcaactgtgagg
aactccatcaaccaggtggtacagctgcgctatggagaggacggcctggcaggggagagt
gttgagttccagaatctggctacacttaaaccttctaataaagcttttgagaagaagttc
cgttttgattataccaatgagagggccctgcggcgcacccttcaggaggacctggtaaag
gatgtgctgagcaatgcccatatacagaatgagctggaacgggaatttgaacggatgcgt
gaagatcgggaagtgctcagggtcatcttcccaactggtgacagcaaggtggtcctccct
tgtaaccttctgcggatgatctggaatgctcagaaaatcttccacatcaaccctcgcctt
ccctctgacctgcatcccatcaaagtggtagagggagtcaaagaattgagcaagaagttg
gtaattgtgaatggagatgacccactaagtcggcaggcacaggagaatgccacattgctc
ttcaacatccacctaagatccacactctgctctcgccgcatggctgaggagtttcggctg
agtggagaggcctttgactggctgcttggggagatagagtccaagttcaaccaagccatt
gcccatcctggagaaatggtgggagctctggctgctcagtctcttggagaacctgccact
cagatgaccctgaacactttccactatgctggtgtatctgccaagaatgtgacgctgggt
gtgcctcgacttaaggagcttatcaacatttccaagaagccaaagactccttcactcact
gtcttcctgttaggtcaatctgcacgagatgctgaaagagccaaggacattctttgccgc
ttggaacatacaacattgaggaaggtgactgccaatacagccatctactatgaccctaac
ccccagagcacagtggtggcagaagatcaggagtgggtgaatgtgtactatgagatgccc
gactttgacgtggcccggatatctccctggctgctgcgtgtggagctcgaccgaaagcac
atgactgaccggaagcttaccatggaacagattgctgagaaaatcaatgcaggttttggc
gatgatttgaattgtatcttcaacgatgataatgcagagaagctggtccttcgaatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaggaagaggtggtggataaaatggat
gatgatgtcttcctgcgatgcattgagtccaacatgctgacagatatgaccctgcagggt
atcgagcagatcagcaaggtgtacatgcacttacctcagacagacaacaagaagaagatc
atcatcacagaggatggggagttcaaggccctgcaggaatggatcttagagacggatggt
gtgagcctgatgcgggtgctgagtgagaaggatgtagaccctgtgcgcaccacgtccaat
gatattgtggagatcttcacggtactgggcattgaggctgtgcggaaggctctggagcga
gaactgtaccatgtcatctcctttgatggttcttatgtcaattatcggcatttggcgctc
ctgtgtgacactatgacatgccgtggccacttgatggccatcactcgtcatggggtcaac
cgccaggacactggaccgctcatgaaatgctcctttgaggaaacggtggatgtccttatg
gaagcagcagcacatggggagagtgacccgatgaagggagtctctgagaatattatgctg
ggccagctcgctccagctggtactggctgttttgacctcctgcttgatgctgagaagtgc
aaatacggcatggaaatccccaccaatatccctggcctgggggctgctggacctaccggc
atgttctttggctctgcacccagtccgatgggaggaatatctcctgcaatgacaccctgg
aaccagggtgcaactcccgcctatggtgcctggtccccgagtgttgggagcgggatgacc
ccaggagcggccggcttctctcccagtgctgcatctgatgccagtggcttcagcccaggt
tactcccctgcatggtctcccacaccaggctctccgggctcccctggaccctcaagccca
tacatcccctcaccaggtggtgctatgtctcccagctactcaccgacatcaccagcctat
gagccacgctcccctgggggctatacaccccagagcccctcctactcccctacttcacct
tcctactccccaacctctccatcttactctccaaccagtcccaactacagccctacctct
cctagctactcgcccacctcccctagctactcgccaacctctccttcctactcccccacc
tctccaagctattccccaacctctcctagctactccccaacctctccaagctattctcca
acatcacctagctattctccaacttctcccagctactcaccgacatctcctagctactcc
ccaacttctcccagctactcaccaacttcaccaagctattctcccacctcccccagctac
tcaccgacatctcccagctactcaccaacttctccaagctactcaccaacttctccaagc
tactcacccaccagccctaactattctccaactagtcccaactataccccgacatcaccc
agctacagcccaacctcacccagttactcacctacaagtcccaactatacacccaccagc
cctaattacagcccaacctctccaagctattccccaacctcacccagttattcccccacc
tcaccaagctactccccctccagcccacgatatacaccacagtctccaacctacacacca
agctcaccaagctacagtcccagctcaccaagctacagccccacttcacccaagtacacc
ccaactagtccttcctacagtcccagctcaccagagtacaccccagcttctcccaaatac
tcacctacaagccctaaatattcacccacttctcccaagtattctcctaccagccccact
tactcacctaccaccccaaaatattctccaacctccccgacatactcaccaacctctcca
gtctataccccgacctctcccaagtactccccaaccagccctacctactcgcccacttct
cccaagtactcgcccaccagtcccacctactcacccacctctcccaagggctccacctac
tctcccacttctcctggctactcacccactagccccacctacagcctcaccagcccagcc
atcagcccagatgacagcgatgaggagaactga

KEGG   Mus musculus (house mouse): 20021
Entry
20021             CDS       T01002                                 
Symbol
Polr2c, 33kDa, RPB3, Rpo2-3, mRBP31
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide C
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    20021 (Polr2c)
  09124 Replication and repair
   03420 Nucleotide excision repair
    20021 (Polr2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    20021 (Polr2c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    20021 (Polr2c)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    20021 (Polr2c)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     20021 (Polr2c)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      20021 (Polr2c)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 20021
NCBI-ProteinID: NP_033116
MGI: 109299
Ensembl: ENSMUSG00000031783
UniProt: P97760
LinkDB
Position
8:95584078..95590870
AA seq 275 aa
MPYANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagccaacagtgcggatcacggaactcaccgaagagaacgtcaag
ttcattatcgagaacacggacctggcggtggccaattccattcggagggtcttcatcgca
gaggtgcccataatagccatcgactgggttcagattgacgccaactcctcggtccttcat
gatgaattcatcgcgcacaggcttggtttaatccccctcactagtgatgacattgtggac
aagctgcagtactcccgggactgcacatgtgaagagttctgccctgagtgttctgtggag
ttcactctcgatgtgaggtgcaatgaagaccagacgcgccatgtcacctcccgagatctc
atctccaacagcccccgggttattccggtgacatctcggaaccgggataacgaccctaat
gactatgtggagcaggatgacatccttattgtcaagctgaggaaggggcaggagctgaga
cttcgagcctatgccaagaagggctttggcaaggaacatgccaagtggaaccctactgcg
ggggtagcttttgaatacgatccagacaacgcacttaggcatacagtgtatcccaagcct
gaggaatggcccaagagtgagtattccgagctggatgaggatgagtcgcaggctccctac
gaccccaacggcaagccagagaggttttactacaatgtggagtcgtgtggctcactgcgc
cctgaaaccattgtcctctcagccctgtcggggctaaagaagaagctgagtgatttacag
actcagttaagccatgagatccagagtgacgtgctcaccataaactag

KEGG   Mus musculus (house mouse): 20022
Entry
20022             CDS       T01002                                 
Symbol
Polr2j, 14.5kDa, Polr2i, Rpb11a, Rpo2-4
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide J
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    20022 (Polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    20022 (Polr2j)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    20022 (Polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    20022 (Polr2j)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    20022 (Polr2j)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     20022 (Polr2j)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      20022 (Polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 20022
NCBI-ProteinID: NP_035423
MGI: 109582
Ensembl: ENSMUSG00000039771
UniProt: Q6PI63 Q3TYI2
LinkDB
Position
5:136145545..136151801
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgctcctccggccttcgagtcgttcttgctcttcgagggcgagaagaaaatcacc
attaacaaggacactaaggttcccaacgcctgcttgttcaccatcaacaaagaagaccac
actctggggaacatcattaaatcgcagctgttgaaggacccgcaggtgctgtttgctggc
tacaaagtccctcaccccttggagcacaagatcatcattcgtgtgcagaccaccccagac
tacagtccccaggaggctttcaccaacgccatcacagacctcatcagcgagctctccctt
ctggaggagcgattccgggtggccatcaaggacaagcaagaaggaattgagtag

KEGG   Mus musculus (house mouse): 231329
Entry
231329            CDS       T01002                                 
Symbol
Polr2b, Pol2rb, Rpb140, Rpb2
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide B
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    231329 (Polr2b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    231329 (Polr2b)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    231329 (Polr2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    231329 (Polr2b)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    231329 (Polr2b)
Enzymes [BR:mmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     231329 (Polr2b)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     231329 (Polr2b)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      231329 (Polr2b)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF5817
Other DBs
NCBI-GeneID: 231329
NCBI-ProteinID: NP_722493
MGI: 2388280
Ensembl: ENSMUSG00000029250
UniProt: Q8CFI7
LinkDB
Position
5:77458331..77497175
AA seq 1174 aa
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYEKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtatgacgccgacgaggacatgcaatatgatgaagacgacgatgagatcactccggat
ctgtggcaggaagcatgctggatcgtgatcagttcttactttgatgagaaaggcttggtc
agacaacagctggattcctttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgcaccaccgattgacctacaggccgaagctcagcacgccagtggagaagttgaagag
ccgccaagatatttactgaagtttgaacaaatttacctctccaaacctactcattgggaa
agagatggtgccccttcgccaatgatgccaaatgaagccaggttaagaaatctcacgtat
tctgctccgctttacgttgacataacaaagacagtcattaaagaaggtgaagaacagctg
cagactcagcaccagaaaacgttcatagggaaaattccaattatgctgcgctccacctac
tgcctgttaaatggcttaacagatcgtgacctgtgtgagctgaatgagtgtcctttggat
cccggtggctattttattatcaatggatcagaaaaggttctgatagctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaagtatgcctatacaggagaa
tgtcgctcatgcctggagaattcttcccgacccaccagtactatatgggttagcatgctg
gccagaggaggacagggtgcaaagaagagtgctattggccagcgcatcgtggcaacgtta
ccatacatcaagcaagaagttcctatcatcattgtgttcagagcactaggctttgtgtct
gatagagatattttagaacacatcatttatgacttcgaggatccagagatgatggaaatg
gttaaaccatctctcgatgaagcgtttgtcatccaagagcagaatgttgccttaaacttc
atcggttcaagaggggcaaagcctggtgttactaaggagaaaagaattaaatatgcaaaa
gaagtcttacagaaagaaatgctccctcacgttggtgtcagtgatttctgtgagaccaaa
aaggcctatttcttggggtatatggttcataggttgcttctagcagccctaggcagaaga
gaactagacgacagagatcactatggcaacaagagattggatcttgctgggcctctgctt
gcattcttattcagaggcatgtttaagaatttgctgaaagaagtacgaatctatgcgcag
aagtttattgatcgcgggaaggattttaacttagagctggcaatcaagacaaggatcata
tctgatgggctaaaatactctttagccactgggaactggggtgaccagaagaaagctcat
caagccagagctggagtatcccaggtattgaaccgcctgacgtttgcatctactctttct
cacctgcgtcgtctaaactctcctattggcagagatggcaagctagcgaagcccagacag
ttgcataataccttgtggggaatggtgtgtcctgctgaaactccagagggccatgctgta
gggcttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccctctcca
attttggaatttttagaagaatggagcatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatccataaagacccc
gaacaactcatgaacacgctaaggaagttacggcggcagatggacatcattgtatccgaa
gtttctatgatcagagatattcgagagcgggagattcggatctatacagatgcaggccgt
atttgtagaccccttctgattgtggaaaagcagaagctgcttttgaagaagagacacatt
gaccagttgaaagagagagaatataacaactacagttggcaggatctggtagccagtggg
gtagtagagtatattgataccctggaagaggagaccgtgatgcttgcaatgactccagat
gatttgcaggagaaggaagtagcttattgttctacctacacccactgtgagattcaccca
tcaatgattcttggagtctgtgcatctattattccttttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggcaagcaggctatgggagtttatatcaccaacttc
catgtgcggatggacaccttggcccatgttctctactatcctcagaaaccccttgtgact
acacggtctatggaatatctacgattcagagagctgccagcaggaatcaactcaattgtg
gccattgcatcctacacgggctataatcaagaagactctgttatcatgaatcgttcagct
gtggatcgaggctttttcaggtctgttttctaccgatcatacaaagaacaagagtctaaa
aagggatttgatcaagaagaagtgtttgagaagcctacacgtgagacatgccagggaatg
aggcatgccatctatgaaaagttggacgatgacggtttgatagctccgggggtccgagtc
tccggagatgacgttattatcggcaagacagtcaccttacccgagaacgaggatgagctg
gagagcaccaacaggcgctacaccaagagggactgcagcactttcctcagaactagtgag
acgggcatcgtggaccaggtcatggtcactctcaaccaggaaggatataaattttgtaaa
ataagggtgcgctctgttagaattccgcagattggagacaaatttgctagccgacatggt
cagaagggaacttgtggtattcagtatagacaagaggacatgccgttcacttgcgaaggc
ataactcctgacatcatcataaacccccacgccatcccctcccggatgacaattggtcac
ttgatcgaatgtctccaagggaaggtctctgccaacaagggtgaaattggtgacgctact
ccatttaatgatgctgtcaatgtgcagaagatttctaatcttttgtctgactatggctac
catctcagagggaacgaggtgctctacaatggattcactggacgaaaaatcacatcacag
atttttattggccccacttactaccagcgtttgaagcatatggtggatgacaaaattcat
tctcgtgctaggggacccattcagattcttaacagacagcccatggagggcagatctcgt
gatggtggcctgcgcttcggagaaatggaacgagactgtcaaattgcccacggtgcagca
cagtttctaagagaaagactgtttgaagcatcagatccgtatcaggttcatgtctgtaat
ctttgtggaataatggcaattgctaacacgaggactcatacatatgagtgcaggggatgc
cgcaataaaacccagatttccttggtgcgaatgccgtacgcgtgcaagctgttgttccag
gagctcatgtccatgagcatcgcaccacgaatgatgagtgtttag

KEGG   Mus musculus (house mouse): 245841
Entry
245841            CDS       T01002                                 
Symbol
Polr2h
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide H
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu04623  Cytosolic DNA-sensing pathway
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    245841 (Polr2h)
  09124 Replication and repair
   03420 Nucleotide excision repair
    245841 (Polr2h)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    245841 (Polr2h)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    245841 (Polr2h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    245841 (Polr2h)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    245841 (Polr2h)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     245841 (Polr2h)
  RNA polymerase III system
   RNA polymerase III
     245841 (Polr2h)
  RNA polymerase I system
   RNA polymerase I
     245841 (Polr2h)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      245841 (Polr2h)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 245841
NCBI-ProteinID: NP_663607
MGI: 2384309
Ensembl: ENSMUSG00000021018
UniProt: Q923G2
LinkDB
Position
16:20536552..20541015
AA seq 150 aa
MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcgggcatcctgttcgaggatattttcgatgtgaaagacatcgacccagaaggcaag
aaatttgaccgagtatcccggctgcactgtgagagtgaatctttcaagatggacctcatc
ttagatgtaaacattcagatttaccctgtggacttaggtgacaagttccggttggttata
gctagtactttgtatgaagatggtaccttggatgatggtgaatacaaccccacagatgac
aggccttccagggctgaccagtttgagtatgtcatgtatgggaaagtgtacaggatcgaa
ggggatgagacctccactgaagcagccacacgcctctctgcgtacgtgtcctatgggggc
ctgctcatgaggcttcagggtgatgccaacaacctgcatggatttgaggtggactccaga
gtttatctgctgatgaagaagctggccttctga

KEGG   Mus musculus (house mouse): 28015
Entry
28015             CDS       T01002                                 
Symbol
Polr2m, D9Wsu138e, Grinl1a, mKIAA4185
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide M
  KO
K21987  DNA-directed RNA polymerase II subunit GRINL1A
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    28015 (Polr2m)
  09124 Replication and repair
   03420 Nucleotide excision repair
    28015 (Polr2m)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    28015 (Polr2m)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     28015 (Polr2m)
SSDB
Motif
Pfam: GCOM2 TRIP13_N
Other DBs
NCBI-GeneID: 28015
NCBI-ProteinID: NP_848717
MGI: 107282
Ensembl: ENSMUSG00000032199
UniProt: Q6P6I6
LinkDB
Position
9:complement(71385719..71393265)
AA seq 366 aa
MFSLPRGFEPPAPEDLGRQSSAELRERLRRQERLLRNEKFICKLPDKGKKISDTVAKLKA
AISEREEVRGRSELFHPVSVDCKLRQKATTRADTDVDKAQSSDLMLDTSSLDPDCSSIDI
KSSKSTSETQGPTHLTHRGNEETLEAGYTVNSSPAAHIRARAPSSEVKEHLPQHSVSSQE
EEISSSIDSLFITKLQKITIADQSEPSEENTSTENFPELQSETPKKPHYMKVLEMRARNP
VPPPHKFKTNVLPTQQSDSPSHCQRGQSPASSEEQRRRARQHLDDITAARLLPLHHLPAQ
LLSIEESLALQREQKQNYEEMQAKLAAQKLAERLNIKMQSYNPEGESSGRYREVRDEADA
QSSDEC
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgttctcgctgccccgcggcttcgagcccccagctcccgaggacttggggcggcagagt
tcggcggagctgcgggagaggttgaggcgccaggagagacttttgcgcaacgaaaaattc
atttgcaaattgcccgacaaaggtaaaaagatctcagacacagttgccaaactgaaagct
gccatttcagaacgtgaagaggttagagggagaagtgaactgtttcatcctgttagtgta
gactgtaagctaaggcaaaaagcaaccacaagagctgacaccgatgtagacaaggcccag
agttctgacctgatgcttgatacttcatcattagatcctgactgttcctcaatagacatt
aagtcatctaaatcaacctcagaaacacagggacctacacatctcactcacagaggcaat
gaagagactttggaggctggctacacagtaaacagcagcccagctgcccacatccgagcc
cgggcgccctcatccgaagttaaggagcatctcccccagcactctgtttcaagtcaagag
gaagagatctccagcagcatcgacagtctcttcatcactaaattgcaaaaaatcacaatt
gcagaccagagtgaaccctcagaagaaaacaccagcactgagaactttccagaactgcag
agtgagactcctaagaagcctcattacatgaaagtgctagaaatgcgagccagaaaccca
gtgccccctcctcataagtttaagaccaatgtgttacccacacaacagagtgactcacca
agtcattgtcagaggggccagtctcctgcttcctcagaagagcagcgacgaagggctagg
cagcatcttgatgatatcacagcagcgcgcctccttccgctccaccacctgcctgcacag
ctgctttccatagaagagtcgctggccctgcagagggagcagaagcagaattatgaggag
atgcaggcaaagctcgcagcacagaaactggccgagagactgaatattaaaatgcagagc
tacaatccagaaggggagtcttcagggagataccgagaagtgagggacgaagctgatgcc
cagtcctcggatgagtgctga

KEGG   Mus musculus (house mouse): 66420
Entry
66420             CDS       T01002                                 
Symbol
Polr2e, 2410021N14Rik, 25kDa, RPB5, XAP4
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide E
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu04623  Cytosolic DNA-sensing pathway
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    66420 (Polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    66420 (Polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    66420 (Polr2e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    66420 (Polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    66420 (Polr2e)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    66420 (Polr2e)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     66420 (Polr2e)
  RNA polymerase III system
   RNA polymerase III
     66420 (Polr2e)
  RNA polymerase I system
   RNA polymerase I
     66420 (Polr2e)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      66420 (Polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 DUF7890
Other DBs
NCBI-GeneID: 66420
NCBI-ProteinID: NP_079830
MGI: 1913670
Ensembl: ENSMUSG00000004667
UniProt: Q80UW8 Q3V214
LinkDB
Position
10:complement(79871787..79875493)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctgtggaagatccgcaagacgatcatgcagctg
tgtcatgaccgtggctacctggtgacccaggatgaactggaccagacacttgaggaattc
aaggcgcagtttggggacaagcccagcgaaggacggccaaggcgcacagacctcacggtg
ctggtggcccacaacgatgaccccacagaccagatgtttgtgttcttcccagaggagccc
aaggtgggcatcaagaccatcaaggtatactgccagcgcatgcaggaggaaaacatcaca
cgggcgctgattgtggtgcagcagggcatgacgccctccgccaagcagtccctggtggac
atggccccgaagtatgtgctggaacagtttctacagcaggagctgctcatcaatatcaca
gagcacgagctagtccctgagcacgtggtcatgacaaaggaggaggtgactgaactgctg
gctcgatacaagcttcgtgagagccagctacccagaatccaggccggggacccagtggca
cggtactttgggatcaagcgagggcaggtcgtgaagatcatccgccccagtgagacggct
ggccgctacatcacctaccgcctggtgcagtag

KEGG   Mus musculus (house mouse): 66491
Entry
66491             CDS       T01002                                 
Symbol
Polr2l, 2510029B14Rik
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide L
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu04623  Cytosolic DNA-sensing pathway
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    66491 (Polr2l)
  09124 Replication and repair
   03420 Nucleotide excision repair
    66491 (Polr2l)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    66491 (Polr2l)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    66491 (Polr2l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    66491 (Polr2l)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    66491 (Polr2l)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     66491 (Polr2l)
  RNA polymerase III system
   RNA polymerase III
     66491 (Polr2l)
  RNA polymerase I system
   RNA polymerase I
     66491 (Polr2l)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      66491 (Polr2l)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 66491
NCBI-ProteinID: NP_079869
MGI: 1913741
Ensembl: ENSMUSG00000038489
UniProt: P62876
LinkDB
Position
7:complement(141051773..141055066)
AA seq 67 aa
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL
NYAPLEK
NT seq 204 nt   +upstreamnt  +downstreamnt
atgatcatcccggtgcgctgcttcacctgcgggaagatcgtcggcaacaaatgggaagcc
tacctgggtctgctgcaggccgagtacacggagggggatgccctggacgctctgggccta
aagcgctactgctgccgccgcatgctgctagcacacgtggacctgattgagaagctgctg
aactatgcacccctagagaagtga

KEGG   Mus musculus (house mouse): 67710
Entry
67710             CDS       T01002                                 
Symbol
Polr2g, 2410046K11Rik, A230108L04Rik, RBP7, Rpo2-7l
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide G
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03020  RNA polymerase
mmu03420  Nucleotide excision repair
mmu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    67710 (Polr2g)
  09124 Replication and repair
   03420 Nucleotide excision repair
    67710 (Polr2g)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    67710 (Polr2g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmu03021]
    67710 (Polr2g)
   03019 Messenger RNA biogenesis [BR:mmu03019]
    67710 (Polr2g)
   03400 DNA repair and recombination proteins [BR:mmu03400]
    67710 (Polr2g)
Transcription machinery [BR:mmu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     67710 (Polr2g)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     67710 (Polr2g)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      67710 (Polr2g)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 67710
NCBI-ProteinID: NP_080605
MGI: 1914960
Ensembl: ENSMUSG00000071662
UniProt: P62488
LinkDB
Position
19:complement(8770493..8775921)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcacatttccctggagcacgagatcctcctgcacccacgatacttcggtcca
aacttgctcaacacggtgaagcagaagctgtttaccgaggtggaggggacctgcactggg
aaatatggctttgtaattgctgtcaccaccatcgacaatattggtgctggtgtgatccag
ccaggccgaggttttgttctttatccagtgaaatacaaagctattgttttccggcccttt
aaaggtgaagtggtggatgctgtggtcactcaggtcaacaaggttggacttttcacagaa
attgggcctatgtcttgcttcatctctcgacattccatcccttcagagatggagtttgat
ccaaattcaaaccccccttgctataagaccatggacgaggacattgtgattcagcaggac
gatgagatacgcttgaagattgtaggcacgcgtgtagacaagaatgacatttttgccatt
ggctctctgatggacgactacttggggctcgtgagctga

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