Mus musculus (house mouse): 218343
Help
Entry
218343 CDS
T01002
Symbol
Skic3, Ski3, Ttc37
Name
(RefSeq) SKI3 subunit of superkiller complex
KO
K12600
superkiller protein 3
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
218343 (Skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
218343 (Skic3)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
218343 (Skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_12
ARM_TT21_C
TPR_9
ANAPC3
TPR_15
ARM_TT21_2nd
TPR-S
Sel1
Fis1_TPR_C
SNAP
BTAD
TPR_30
YceG_bac
TPR_20
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
218343
NCBI-ProteinID:
NP_001074821
MGI:
2679923
Ensembl:
ENSMUSG00000033991
UniProt:
F8VPK0
LinkDB
All DBs
Position
13:76246837..76338437
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPEQLLAWQGLASLYEKCNQVNAKDDLPGVYQKLLDLYESADRQKWCDVCK
KLVALYHQEKKHLEVARTWHRLIKTRQEDGADRQELYELWRKLSQLLAENIEDQNNETQQ
MLLTAFENALDLADNIPSEDHQVLYRNFIQCLSKFPHETTKLKKACEEMIAIYPTVQYPL
EVICLYLIDSGSLTSEGHQYCCKLVEMNSKSGPGLIGLGIIALQDKKYEDAVRHLTEGLK
ESPVCIAGWCHLAEAQVKMHRPKEAILSCNQALKTIDNFGASGGNLHQKNLCLRLKAEAL
LKLSDGASSEEAVRTLDQVSDVDNTPGLLVLQGLACLNTGAVDKATKIMEDLVTSYPDLA
EAHALEGRVHFTKKDYVQAEVSFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDAHMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDNDAESGAAAVDLSLE
LEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFMKASELNPDSTYSVFKVAAIQQILGRYSEAIAQYQLIIK
MKEDYVPALKGLGECHLLLGKVALVDFLDGKAVDYVEQALGYFTRALQHRADVSCLWKLV
GDACTCLHPVSPSKVHVHVLGALLGQKEGQEVLKKEELLSLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQHLAETGSSMSDLTELLEKSLHCLKKAVRLDSNNHLHWNALGVVACYRGV
GNYALAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAERVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILEMN
AIPAAQGVLCKYVERIQNSASAFTMLGYLNEHLQLKKEAAEAYQRATTLLHSAEDQNTYN
VAVRNWGRLLCSIGDYDRAIQAFKSTPLVELEDIIGFALALFMKGLYKESGSAYERALAV
CKSEQDKAHILTAMAIVEYKQGKMDAAKSFLFKCSILKEPTAESLQALCALGLAMRDATL
SKAALNELLKHIKRRNDYHSCLLMSAIYALQGHSVAVQRQVAKAVHSNPADPALWSLLSR
IVAQYTQRSAKGGAVAGNVAHILDLNHGKKALLYTAVNQLAMGSSTAEDKSNTALKTIQK
AAFLSPDDPAVWAGLMAACHADDKLALLNNTQPKRVDLYLALRSAVAASLKDKEILQNYN
QSLEKWSFSQVVTGLIDTGKTSEAESLCTQSLKSNPDQPAVILLLRQVQCMSLLESQKPL
PDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGNWSGKLS
SLLKLALLALEVCMANVSGDHWSSLVQEATSEALKVCFSPLAVFLQALLQFNRKMGARET
RRLLERIVYQTGYPSSIVSAARWYLLRHLYAKDDPELIDVLVRNAETHGDKRILELNRKL
SAQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaagtgaagactgctctaaaaagtgcaagagatgcaatcagaaacaaa
gagtacaaagaagctttgaaacattgcaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgaactagaacagcctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaacagctgctcgcctggcaggggcta
gcaagtttgtatgagaagtgcaatcaagtaaatgctaaggatgacttacctggtgtttac
caaaagctgttggatctctatgaaagtgctgacagacagaagtggtgtgacgtgtgtaag
aaactcgtggctctctatcaccaggaaaagaaacacctagaggtggctcggacatggcat
agattgataaagacacggcaggaagatggagcagacagacaagagctttatgagctgtgg
agaaaattgagtcagttgctggctgagaatatagaagatcagaataatgagacccagcag
atgcttttaactgcatttgagaatgcattggacttagcagataacattcccagtgaagat
caccaagtactttacaggaatttcattcagtgtttatctaaatttcctcatgagacgact
aagttgaagaaggcctgtgaagaaatgatagctatctatcctaccgtacagtacccacta
gaagtgatctgtttgtacttaattgactcagggagcctgaccagtgagggacaccagtat
tgttgcaagctagtggaaatgaattcaaaaagtggtccaggccttattggcttaggcatt
atagctttacaagacaagaagtatgaagatgctgttcgtcatctaacagaaggcttgaag
gaaagccctgtctgcatagctgggtggtgtcatctagccgaagcccaagtcaaaatgcac
agacctaaggaagctattctttcttgcaatcaagctctgaagaccatagataactttggt
gcatcaggtggcaaccttcatcagaagaatctttgtcttcgtctgaaagcagaggctttg
cttaaactctcagatggtgcatcttcggaggaggcagttcgtacccttgatcaggtttct
gacgtagataataccccaggactgctggttctccaaggcctcgcctgtctgaacacaggc
gctgtggacaaggctacaaagatcatggaagaccttgtaacctcttaccctgatctagct
gaggctcacgctcttgagggtcgggttcactttactaagaaggactacgtgcaggcagaa
gtgagtttccaaagagcacttgagaaagatgctgaagttgctgaatatcattaccagctt
ggactgacatactggttcatgggtgaagaaacaagaaaagacaaaacaaaggctcttacc
cactttctaaaggctgcgagactggatgcacacatgggtaaagttttctgctacttaggc
cattattaccgagatgtggctggagatagaaacagagcccgagggtgttacaggaaagct
tttgaattagatgacaatgatgctgagtctggagctgctgcagttgacctgagcctggag
cttgaagacacggaaactgcgttagctatcttgacagcagtaactcagaaggcaagtgct
ggagcagctaagtgggcgtggctgaggagaggactgtaccatttgaaagctggtcaacac
tctcaagcagtggctgacttacaggcagcattaagggcagacccaaaggactgcaattgc
tgggagtccttaggagaggcgtacttaagcagaggtggctacacaacagccttgaagtcg
tttatgaaagccagtgagctcaacccagactccacatacagtgtgtttaaggtggcggcg
atacagcaaatcctaggcaggtactcagaggccattgcacagtaccagctgatcattaaa
atgaaagaagattatgtgcctgccttaaaaggtttgggtgagtgccacctgttgctgggg
aaggtggccttagtggattttctggatggaaaagctgtggactatgtggaacaagcgctg
ggatatttcacccgggccctgcagcatcgagctgatgtgtcttgcctttggaagctcgtg
ggagatgcctgtacctgtctgcatcctgtttctccatctaaagtgcatgttcatgtctta
ggagcccttctcggccaaaaagaaggacaagaagtcttaaagaaagaggaactcctgagt
cttggaggaaggtgttatggtcgtgcattaaaattgatgtctacatctaatacatggtgt
gatcttggaattaattactaccgtcaagtacaacatctagctgaaacaggcagcagcatg
agtgatcttactgagttactggagaaatctttgcattgtctgaaaaaggcagtgaggctg
gacagtaataaccacttacattggaacgctcttggtgtggttgcatgctaccgtggagtt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccaggcagaacaaattaat
gctgctgcgtggaccaacttaggagtgttatacctcgcgactgaaaacatcgagcaagcc
catgaagcattcaaaatggctcagtcccttgatccatcttatttattgtgctggattgga
caggctcttattgcagaaagagttggaagttatgataccatggatctcttcaggcacact
acagagctcagtatgcatactgaaggagcaataggttatgcatattgggtttgtactaca
ttacaagacaagagcaacagagaaacagagctgtaccagtacaacatccttgagatgaat
gctatccctgcggcacagggcgttctctgtaaatatgtagaaagaattcagaattccgct
tcagctttcacaatgttgggttatttaaacgagcatctgcagctgaaaaaggaagccgcc
gaggcgtaccagagggcaactacactgttacattctgctgaagaccaaaatacttataat
gttgcagtaagaaactggggtagactgttatgctccattggtgactatgacagagctatc
caggcctttaagtcgacgccacttgtggagctggaggacatcattgggtttgcactggca
ttgtttatgaagggcctgtataaagagagcggctcagcctatgagagagccttggcagtt
tgtaaatcagagcaagacaaagctcacatcttgacagctatggcaatagtggaatataaa
caagggaaaatggatgcagccaagtcatttctcttcaaatgctctattttaaaggaacca
actgcagaaagtcttcaagcactgtgtgctctagggttggcaatgcgcgatgccacactg
tcaaaagcagcactgaatgagttgctgaagcatatcaaacgcagaaacgattatcacagc
tgccttctgatgtcagcaatttatgcactgcagggccacagtgtggcagtacaaagacaa
gtggccaaggctgtgcacagtaaccctgctgaccctgctctttggtctttgctatctcga
attgttgctcagtacacacagcggagcgcaaagggaggtgctgtagctggcaatgtggct
catattctggatttgaatcatggaaagaaggcattattgtatactgcagtgaaccagttg
gccatgggaagcagtacagcagaagataaaagcaatactgctctaaagaccattcagaag
gcagccttcctttctccagatgaccctgctgtctgggctgggctgatggcagcctgccat
gcagatgataaactggctttactcaataacactcagccaaagagggtagatttgtacttg
gcattgcggtctgctgttgctgcttcacttaaggacaaagaaattttgcaaaattacaac
cagtcgcttgaaaagtggtctttctcacaagttgtcactggtctgattgacacaggaaaa
acatctgaagctgaatctctgtgcacacagagtttgaaaagtaaccctgaccagccagct
gttatcttactgttgagacaagttcagtgtatgtcactcctggagtcacagaagcccctc
ccagatgctgtactggaagaactgcaaaaaacagtcatgtccaactcaacctctgtcccg
gcatggcagtggttggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgttacagaaagagtctccaagtggcatcccaacagggcaactggagtgggaagctctcg
agtctgttgaagctagcccttcttgcattggaagtgtgcatggctaatgtttcaggtgat
cactggtcatccttggttcaagaagccacaagtgaggccttgaaggtttgctttagcccg
ctggctgtcttcttgcaagcattgttacagttcaaccgtaagatgggagcaagagagaca
cggcggcttttggagagaatcgtgtaccagactggataccccagctcaattgtatcagcc
gctcggtggtacctcttaagacacctctatgcgaaagatgaccctgaactcattgatgtg
ttggtgaggaatgcagagactcatggtgataaaagaattttggaactgaatcggaagctg
tcagcccagtga
DBGET
integrated database retrieval system
