Mus musculus (house mouse): 22330
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Entry
22330 CDS
T01002
Symbol
Vcl, 9430097D22
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04510
Focal adhesion
mmu04520
Adherens junction
mmu04670
Leukocyte transendothelial migration
mmu04810
Regulation of actin cytoskeleton
mmu04820
Cytoskeleton in muscle cells
mmu05100
Bacterial invasion of epithelial cells
mmu05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
22330 (Vcl)
04520 Adherens junction
22330 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
22330 (Vcl)
04810 Regulation of actin cytoskeleton
22330 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
22330 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
22330 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
22330 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmu04812
]
22330 (Vcl)
04147 Exosome [BR:
mmu04147
]
22330 (Vcl)
Cytoskeleton proteins [BR:
mmu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
22330 (Vcl)
Exosome [BR:
mmu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
22330 (Vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
VMAP-M0
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
22330
NCBI-ProteinID:
NP_033528
MGI:
98927
Ensembl:
ENSMUSG00000021823
UniProt:
Q64727
Structure
PDB
LinkDB
All DBs
Position
14:20979436..21083744
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacgcgtacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtagccgccgtgcaggcggccgtcagcaacctcgtccgggttggaaaagag
actgttcagaccactgaggatcagattctgaagagagatatgccaccagcctttattaag
gttgaaaatgcttgcaccaagcttgttcaggcagcccagatgcttcagtcagacccatac
tcggttcctgcgcgggattacctcattgacggctctaggggaatcctttctggcacatct
gacctactgcttaccttcgatgaggctgaggttcgtaaaattattagggtttgcaaagga
attttggaatatcttacagtggcagaggtagtggaaactatggaagacttggtcacttac
acaaagaatcttgggccaggaatgactaagatggccaaaatgattgatgagagacagcag
gagttgactcaccaggaacaccgtgtgatgttggtgaactcaatgaacactgtcaaagag
ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa
attaacgagatcattcgtgtgttacaactcacttcctgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagcgctggcgtccatagactccaaattgaaccaggcc
aaaggttggctccgtgaccccaatgcctccccaggggatgctggagagcaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgacctccgagcc
agaggacaaggagcttccccagtggccatgcagaaggcccagcaagtgtctcaggggctc
gacgtgcttaccgccaaagtggagaatgcagctcggaagctggaagccatgacgaactca
aagcagagcattgcaaagaagattgatgctgcccagaattggctggcggatccaaatggt
ggacctgagggagaagaacagattcgaggggctttggctgaagctcggaagattgcagaa
ttatgtgatgatcctaaggagagagatgacatcctccgctcccttggagagatagctgct
ctgacctctaaactaggagacttgcgaagacaggggaaaggagactcgccagaggctcga
gccttggctaaacaagtggcgacggcactacagaacctgcagaccaaaaccaacagggcc
gtggccaacagcagacctgccaaagcagctgtccacctcgagggcaagattgaacaggcg
cagcggtggattgataaccccacagtagatgaccgtggagtcggtcaggctgccatccgt
ggacttgtggctgaggggcatcggctggccaatgtcatgatgggaccttatcgccaagat
cttcttgccaaatgtgaccgtgtagaccagctaacagctcagctggctgacctggctgcc
cgaggggagggggagagtcctcaggcgagagcacttgcatcccagcttcaggactcctta
aaggatcttaaagcccagatgcaggaagctatgactcaagaggtatccgatgttttcagc
gatactacaactcctatcaagctgttggcagtagccgccactgctcctcctgatgcaccc
aatagggaagaggtatttgatgaaagggcagccaattttgaaaaccattcaggaaggctt
ggagccacagcagagaaggcggctgctgttggtactgccaataaatcgacagtggaaggc
attcaggcatctgtgaagacagcccgagaactcactccccaggtcatctccgctgctcgg
atcttactgaggaaccctggtaaccaggctgcttatgaacattttgagaccatgaagaac
cagtggattgataatgttgaaaaaatgacagggctggtggacgaggctattgataccaag
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggccaatattcagcctcagatgctggtcgctggagcaaccagtattgctcgtcgggcc
aaccggattctgctggttgctaagagggaggtagagaactctgaggacccgaagttccga
gaggctgtgaaagctgcctctgatgaactgagcaaaacaatctcccccatggtgatggat
gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctccaccagaccttgaacagctacgactaactgatgagctggctcct
cctaagccacctctgcctgagggtgaagtccctccacccaggcccccaccaccagaagag
aaggatgaagagttccctgagcagaaagctggtgaggtgattaaccagccaatgatgatg
gccgccaggcagctccacgatgaagctcggaaatggtctagcaagggcaatgacatcatt
gcagcagccaagcgcatggctctgctgatggcagagatgtctcggctggtaagagggggc
agtggtaccaagcgggcacttattcagtgtgccaaggatatcgccaaggcctctgatgag
gtgacgaggttggccaaggaggttgccaagcagtgcacagataagcggattagaaccaat
ctcttacaggtatgcgagcgaatcccaactataagcacccagctcaaaatcctatccaca
gtgaaggccactatgctgggccggaccaacatcagtgatgaggagtctgagcaggccaca
gagatgctggttcataatgcccagaacctcatgcagtctgtgaaggagactgtgcgagag
gctgaagctgcttcaatcaaaatccgaacagatgctggctttactctgcgctgggtcaga
aagactccctggtaccagtag
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integrated database retrieval system
