Mus musculus (house mouse): 227699
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Entry
227699 CDS
T01002
Symbol
Nup188
Name
(RefSeq) nucleoporin 188
KO
K14311
nuclear pore complex protein Nup188
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
227699 (Nup188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
227699 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
227699 (Nup188)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
227699 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
227699
NCBI-ProteinID:
NP_938046
MGI:
2446190
Ensembl:
ENSMUSG00000052533
UniProt:
Q6ZQH8
LinkDB
All DBs
Position
2:30176419..30234278
Genome browser
AA seq
1759 aa
AA seq
DB search
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKYWQRLLEGLSYYKPPSPSSAER
VKANKDVASPLKELGLRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LTLKIADYYYEERTCILRCVLHLLTYFQDERHPYRAEYADCVDKLEKELVLKYRQQFEEL
YRTEAPTWETHGNLMTERQVSRWLVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTSRHLVGGTMDPFVDRIGYFSALILVEGMDIESLHKYALDDRRELHQFAQDG
LICQDMDRAMLTLGDIPHHAPVLLAWALLRHTLSPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFALTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELHKH
KPHDVLSHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVNVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSNMTQMISAEGMNA
GGYGSLLMNSEQPQGEYGVTIAFLRLVTTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVRELIGCLILELIHAILNLCQETELHSSHTPSLPSLCICSLAYTEAGQTVISI
MGIGVDTIDMVMAAQPRSDGPEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHRHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSNGSKEFSLGVWSCLH
VVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSVLETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVYMADTEGSSCTSLLEYQMLVSAWRILLIIAASHADVMHLTDMAVRRQLFLDVLDGT
KALLLVAASVNCLRLGSMMCTLLLILLRQWKRELGAVEKILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKELRVGDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASDSAAE
DKDSMETDDCPRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTGQT
PSTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVKTV
QSLACLEEADHTVGFILQLSHFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGLPSAVTPRAQRPSTTTTTTTTTTALATPAGCSSKQPTADTEASEQRALHTV
QYGLLKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTL
LATVNVALNMLGELDKKKESLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYL
RDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKATSLSKASP
ESQEPLIQLVQAFVRHVQR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgctggtgggccgtgtgtgaggagcagtagagaactctggacaattcta
cttgggaggtcagctcttagagaattgaatcagattgaggcggaactgaataaatattgg
cagcggttgttagaagggctttcttactacaaacctcccagtccaagttcagctgaaaga
gtgaaagctaataaagacgtagcgtcacctctgaaggagctgggcctaagagtcagcaag
ttcttgggtcttgatgaagagcagagtgtgcagttactgcagtgttaccttcaggaggat
tacaggggtactcgggactcactaaagacagtcctgcaagatgagaggcagagccaggcc
ttaaccctgaagattgcagattattattatgaagaaagaacctgcattcttcgttgtgtc
ttacaccttctgacatatttccaagatgaacgccatccatacagggcggaatatgctgac
tgtgttgacaaactggagaaggaactagttttaaagtaccggcagcagtttgaggagctg
tatagaacagaagcaccaacctgggagacgcatggcaacctcatgactgagcgtcaggtg
tcgcggtggttggttcagtgcctccgggaacagtccatgctgttagaaattattttcctt
tattatgcatacttcgagatggcaccaagtgacctattggtactaaccaagatgttcaag
gagcaagggtttggtagtaggcagaccagcaggcaccttgtgggtggaaccatggatcct
tttgtagatcgcattgggtacttcagtgccctcatcctggtggaagggatggacatcgag
tccctgcacaagtacgccttggatgacaggcgagagctgcaccagtttgctcaggatggc
ctcatctgccaggacatggaccgagcgatgttgaccttgggagacattccgcaccacgcc
cctgtgcttttagcctgggctctcctccgtcacacactgagcccagaagagaccagcagt
gtggtcaggaagatagggggcacggccatccagctgaatgtgtttcagtacttgactcga
ctgcttcggtcacttgccagtggaggaaatgattgcaccacgagcaccgcctgcatgtgt
gtctatggtcttctctcctttgccctcacctcactggagctgcacacactgggcaaccag
caggatgtcattgacacagcatgtgaagtcctggcagacccttcccttccagagctgttc
tggggaacagagccaacctctggtctcgggatcattctggacagtgtgtgtgggatgttt
ccccatctcctttccccacttctgcaattgctccgagccctcgtgtcagggaagtccact
gccaaaaaagtgtacagcttcctggataaaatgtctttctacaacgaactccataagcac
aagccccatgatgtgctctctcatgaagatggaactctgtggcggaggcaaacacccaaa
ctcctgtaccctctagggggtcagaccaaccttcgcattcctcagggcactgtgggccaa
gtcatgctggatgacagggcttaccttgtccgctgggagtactcttacagcagctggacc
ctcttcacctgcgagattgaaatgctgctccacgttgtctccacagcagatgtgatccag
cattgccagcgggtcaagcccatcattgatttggttcataaggtcatcagcacagacttg
tccatagcagactgcctgctgcccatcacatcccgcatctacatgctgttgcagcggctg
acgacggtgatctcccctcctgtaaacgtcattgcttcttgtgtcaactgcttaactgtc
ttggctgctcgaaacccagcaaaggtctggactgatcttcgtcacacaggttttttgcca
ttcgtggcccaccctgtctccaacatgactcagatgattagtgcggagggaatgaatgct
ggagggtatggcagccttctgatgaacagtgagcagccccagggcgaatatggggtcacc
attgcctttctgcgcctggtcaccacgcttgtcaaggggcagcttggtagtacccagagc
caaggcctggtgccttgtgtgatgttcgtgttgaaggagatgcttcccagctaccacaaa
tggcgctacaactctcatggcgtgcgagagctgataggttgcctaattctggagctgatt
catgcaatactgaacctgtgccaagagacagagctgcatagcagccacacacccagcctg
ccttccctctgcatctgcagcctggcttataccgaagctggacagaccgtcattagcatc
atgggaattggtgtagacaccatagacatggtgatggctgctcagccccgcagtgatggg
ccagaaggccaaggccagggccaactgctgatcaagacagtgaagctggcgttctctgtc
accaacaatgttattcggctgaaacctccttctaatgtggtttcacccctggaacaggct
ctcacacaacatggtgcccacgggaacaacctcattgctgtcctagccaagtacatctac
cacagacatgacccagccttgccacgtctggccatccagctgctgaaacgcttggccacg
gtggccccaatgtcagtgtatgcttgcctgggcagtgatgcagcggccatccgtgatgcc
ttcctgacccgccttcagagcaagattgaggacatgcgcatcaaagtcatgatcctggag
ttcctgacagtggcggtagagacacagccaggtctcatcgagctgtttctgaatctggag
gtgaaggatggcagcaatggctccaaggaattcagccttggtgtgtggagctgtctccat
gtggtgctggagctgattgattcccagcagcaagatcgatactggtgcccacctctgttg
catcgtgcagctattgccttccttcatgccctgtggcaagaccgtagggacagtgcaatg
cttgtcctcagaaccaaacccaagttttgggagaatttaacaagtccgctgtttggaact
ctctctcctccttcagagacatctgagcccagtgtcctggaaacctgtgccctgatcatg
aagataatatgtttggagatatactatgtagttaagggctcgttagaccagtcattaaaa
gatacactcaagaagttctccagtgagaaacgctttgcctactggtcagggtacgtcaag
tctttggcagtttacatggctgacacagagggcagcagttgcacgtccctgctagagtat
cagatgctggtctccgcctggaggatacttctcatcattgctgccagtcacgcagacgtc
atgcacttgactgacatggcagtgcggcgccagctgtttcttgatgtgcttgatgggacc
aaagcattactccttgtggcagcatctgtgaactgcctccggctgggctccatgatgtgc
accctgctgcttatcctcctacgccagtggaagagagagctgggtgctgtggagaaaatc
cttgggcccttgacagagatcctggaaggggtgcttcaggcagaccagcagctcatggaa
aagaccaaggccaaggtgttctctgcattcatcacagtgttacagatgaaggagctgcga
gtcggtgatatcccccagtactcccagctggtgctgaacgtctgtgagactctccaagaa
gaggtgattgcactctttgatcagacccgccacagcctggcatccgacagcgctgccgag
gacaaggacagcatggagacagatgactgccctcggccccggcacaaggaccagcgtgat
ggggtgtgtgtcctgggactgcatctggctaaggagctctgtgaggtggatgaggatggg
gactcatggttgcaggtgacccgaaggctccccattctgcccacgctgctcaccacgctg
gaggtgagcctccgcatgaagcagaacctgcattttactgaggctgcgctgcacctgctc
ctcaccctggctcgaacccagcaaggagccacagcagtggctggagctggcatcacccag
agcatctgtttgcccctcttgagtgtataccagcttagcagcaatggcacaggacagaca
cctagcacctctcgaaagtccctggatgccccatcctggccaggagtctaccgcctgtcc
atgtccttaatggagcgattgctcaagactctacgctacaatttcctgacggaggctcta
gactttgtgggtgtccatcaagaacggaccttgcagtgtctcaatgccgtgaagacagtg
cagagtctagcctgcctggaggaagcagatcacaccgtgggcttcatcctacaactgtcc
cacttcaggaaggagtggcacttccatctgcctcagctcatgcgtgatgttcaggtgaac
ctgggttacttgtgccaggcctgtacctccctcctgcacagccgcaagatgctgcagcac
tacctacagaacaaaaatggtgatggcctcccttcagctgtcactccccgagctcagcgg
ccatccaccaccaccaccaccaccaccaccaccaccgctctggctaccccagctggctgc
tcctccaagcagcctactgctgacactgaggcctcagaacagcgagccttacacacagtc
cagtatgggcttctcaagattctcagcaggaccctggcagccctgcgccacttcactccg
gatgtctgccagatcctgttggaccagtccctggatcttgctgagtacaacttcctcttt
gccctaagttttaccactcccacctttgactctgaagtggctccctccttcggaaccctc
ttggccacagtgaacgtggccctcaacatgcttggagagctggacaagaaaaaggaatcc
ctcacccaggctgtgggactcagcacacaagcagaagggacccgaacattaaagtccctc
ctgatgttcaccatggagaactgcttctacctgctcatctcccaagcagtacgctacctc
agggacccggctgtgcacccccgggacaagcagcggatgaagcaggagctgagctcggag
ctgagcacgttgctttccagcctctcacgatacttcagaaggggggcccccagctcccct
gctgctggagtcctgccctcaccacagggcaaggccacctctctctccaaagccagccca
gaatctcaggagcctctgatccaacttgtgcaagcctttgtccggcacgtgcagagatag
DBGET
integrated database retrieval system