Mus musculus (house mouse): 319955
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Entry
319955 CDS
T01002
Symbol
Ercc6, 4732403I04, C130058G22Rik, CSB
Name
(RefSeq) excision repair cross-complementing rodent repair deficiency, complementation group 6
KO
K10841
DNA excision repair protein ERCC-6
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
319955 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
319955 (Ercc6)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
319955 (Ercc6)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
319955 (Ercc6)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
319955 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Ig_Rha78A_N
Motif
Other DBs
NCBI-GeneID:
319955
NCBI-ProteinID:
NP_001074690
MGI:
1100494
Ensembl:
ENSMUSG00000054051
UniProt:
F8VPZ5
LinkDB
All DBs
Position
14:32235248..32302947
Genome browser
AA seq
1481 aa
AA seq
DB search
MFHEEVPNSTHPQEQDCLPSQHANAYKDMPVGQENGGVSEAGECLSSTSCEYGPSTSAEA
CVLAATRRGPTLLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAMHEA
SCVAQLADAEKEYQSVLDDLMSCTTSLRQINKIIEQLSPQAASNRDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAGVQVELDHASLEEDDAEPGPSCLGSMLMPAQETAWEEL
IRTGQMTPFGTPAPQKQEKKPRKIMLNEASGFEKYLAEQAQLSFERKKQAATKRTAKKAI
VISESSRAAIETKADQRSQVLSQTDKRLKKHSRKLQRRALQFQGKVGLPSGKKPLEPEVR
PEAEGDTEGEESGSSPTDGEEEEEQEEEEGVASLSSDDVSYELKPLRKRQKYQKKVPVQE
IDDDFFPSSEEEDEAMEGRGGGRKVARRQDDGDEDYYKQRLRRWNRLRLQDKEKRLKLED
DSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIA
FLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYT
HKKERLIRDIVYCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQ
FRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
KTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKA
VYRILNGENQIFSGLVALRKICNHPDLFSGGPKNASGPPEDELEEEQFGHWRRSGKMIVV
ESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNED
TSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLT
AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQGTETSAIFAG
TGSSIQTPKCQLKKRTSTVLGTDPKCKKPPVSDTPANAATLIGEKPKAAGATGRSVTSGE
SGPFKGDHDTNGNRASSVAFGEETDAGSTLEHLSVMSGDGKHSDSPTVDHTSRPPVEAST
SEKQGSSYAGARCQAQTEPVPMSEQMEGQFSKYKSKRKHDASEEETTEKRPQPKQKAKNS
KHCRDAKFEGTRVPHLVKKRRYRQQTSEQEGGAKDRSSDDYVLEKLFKKSVGVHSVVRHD
AIIDGSSPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGISGAPTGVKN
RFGQKRDSSLPVQHPSSLTEKTQNNMKKEGKAHTPEHFSGKEDGASVSGAPSSSSLLARM
RARNHMILPERLESDSEHLAEAAAVPPCGTEHDDLLVDMRNFIAFQAQVDGQASTQEILQ
EFESKLSVAQSCVFRELLRNLCNFHRTPGGEGIWKLKPEYC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgttccacgaggaagttcccaactccactcaccctcaggagcaagactgtttaccaagt
cagcatgccaatgcttacaaagacatgccagttgggcaggagaatggtggggtctcagag
gccggggagtgcctctcctctacttcctgtgagtatgggccatccacatctgctgaagct
tgtgtgttggcagccacaaggcgtgggccgaccctgctacacattgatcggcatcagatc
cctgcagttgagcccagtgctcaggccctggagctgcagggcctgggtgtggacgtctat
gaccaggctgtcctggaacaaggcgtgcttcagcaggtggacagtgcgatgcatgaggcc
agctgtgtggcccagcttgctgatgcggagaaggagtatcagtcagtcctggatgacctc
atgtcatgtacaacatccctgaggcaaatcaataaaattatagagcaacttagccctcaa
gctgccagcaacagagacatcaacaggaaactagattccgtgaagcgacagaagtataac
aaggaacaacagctaaagaagataactgcaaaacagaaacgtctccaggccattctcgga
ggggctggggtccaagtggaactggatcatgccagcctagaggaggacgatgcagagcca
gggccatcatgtcttggcagtatgctcatgcctgcccaggagaccgcctgggaggagctt
atccgcactggccagatgacaccgtttggtaccccagcccctcagaaacaggagaaaaag
cccagaaaaataatgctgaatgaagcatcaggctttgaaaaatatttggcagagcaagca
caactttcgtttgaaaggaagaaacaagctgctactaaaagaacagctaaaaaagctata
gtcatatccgagtcaagccgagcagcaattgaaaccaaggcagaccagagaagccaagtg
ctctctcagacagacaagcgcctgaagaagcacagcaggaaactccagaggagggcgctg
cagttccagggcaaagtgggattgccgagcgggaagaaacctttggagcctgaggtgagg
ccagaggccgagggagacactgagggtgaggagtctgggtcctctcccaccgatggggag
gaggaggaagaacaagaggaggaggaaggggtagccagcctgtcttctgatgacgttagc
tatgagctgaagcctcttcggaagaggcagaaataccagaagaaagtcccagttcaggag
atcgacgatgacttctttccaagttctgaggaggaagatgaagctatggaaggaagagga
ggaggccgaaaggtagccaggcgccaagacgatggagatgaggattattataagcagcgg
ttaaggaggtggaacaggctgaggctgcaggacaaagagaaacgcctgaagcttgaagat
gattctgaggagagcgatgccgaatttgacgaaggtttcaaagtgccgggttttctgttc
aaaaagctctttaagtatcagcagacaggtgttaggtggctgtgggaattgcactgccag
caggcaggaggaattctgggagacgaaatgggattgggcaagaccatccagataattgcc
ttcttggcaggtctgagctacagcaagatcaggactcgcggttcaaattacaggttcgag
ggactaggccccactataattgtctgcccaacgacagtgatgcatcagtgggtgaaggaa
ttccacacgtggtggcctccattcagagtggcagttctgcatgaaacaggttcctacacc
cacaaaaaggagaggctgattcgagatattgtttattgtcatggagttttgataacttca
tattcatacatccgactgatgcaagatgacattagcagacatgactggcactacgtcatc
ttagatgaaggacacaaaattcgaaatccaaatgctgcagtcacccttgcttgcaaacag
ttccggacacctcatcggattatcttgtctggctcaccgatgcagaataacctccgagag
ctgtggtcactcttcgacttcatcttcccaggaaagctgggcacattgcctgtgtttatg
gagcagttctctgtccccatcaccatgggaggctattccaatgcttccccagtacaggtt
aaaactgcttataagtgtgcatgtgtcttaagagacacgataaacccgtacttactgcgg
agaatgaaatcagatgtcaagatgagcctttcgttgccagataaaaatgagcaggtctta
ttttgccgtctaactgatgagcagcataaagtctaccagaatttcattgattctaaagca
gtctacaggattctcaatggagaaaatcagattttctctggacttgtagcgctgaggaag
atctgcaaccaccctgacctcttttctggcggccccaagaacgccagtggtcctccagag
gatgagctggaagaagagcagtttggacactggagacgctctgggaaaatgattgttgtt
gagtctttgctgaaaatatggcacaggcagggtcagcgggtgctgctgttttcccagtcc
aggcagatgctacacatactggaagtgttcctgagagcccataagtattcctatctcaag
atggatgggaccaccaccatagcgtcaagacagccgctgattacaaaatacaatgaggac
acgtccatctttgtctttcttctgaccacacgggtgggtggcttaggagtgaacctgacc
ggtgccaacagagtcatcatctacgacccagactggaatccaagcaccgacacacaggcc
cgggagcgagcatggaggataggtcagaagaagcaggtgactgtctacaggcttctgacg
gctggcaccattgaggaaaagatctaccaccgacaaatcttcaagcaatttttgacaaac
agagtgctaaaagacccaaaacaaaggcgctttttcaaatccaacgatctctatgagctg
ttcactctgaccagtcctgacgcctcccagggcactgagacaagtgctatttttgcagga
acgggctccagtattcagacacccaaatgccagttaaaaaaaaggacttccacagtcctg
ggaacagatcccaaatgcaagaagccccctgtttctgacacacctgcaaatgctgccacc
ctgattggagaaaaacctaaggcggcgggagctacaggaagaagtgtcacttctggagaa
agtggtcctttcaaaggcgaccatgacacaaatgggaacagagctagcagtgttgctttt
ggagaagagacagatgcagggtccacactggagcatctctcagtgatgagtggagatggg
aagcattcagattctccaacagttgaccacacatccaggccaccagtggaggcaagcacc
agtgagaagcagggttcttcctatgcaggggcgcgctgccaggctcagacagaacctgtt
cccatgagtgaacaaatggaaggtcagttttctaagtacaaatccaaaaggaagcatgat
gcatctgaggaagagaccacagagaaacgtccacagcccaagcaaaaggccaagaactcc
aagcattgcagagatgctaagtttgagggaactcgagtcccgcacctggtgaagaaaaga
cggtaccgccagcaaaccagtgagcaggagggcggagccaaggaccggagcagcgatgat
tatgtgttggaaaagcttttcaaaaaatcagtgggcgtgcacagcgtcgtgaggcatgat
gccatcatagatgggtccagtccagattatgtgctggtggaagcagaagccaaccgagtg
gctcaggacgccttgaaagctctgaggctctctcgtcagcaatgcctgggggcagcatct
ggtgttcccacctggactggccacagggggatttctggtgcaccaacaggagtaaagaat
aggttcggtcagaaaagggactccagcctccctgtgcagcatccttcatcactaacagaa
aagactcagaacaacatgaaaaaggagggaaaagctcacacccctgagcacttcagtggc
aaagaagatggagcatctgtgtctggagcgcccagttcctcctccctcttggccagaatg
cgagcaagaaaccacatgattttgccggagcgcttagagagtgacagtgaacatcttgct
gaggctgctgccgtgcctccctgcggcaccgaacacgacgaccttctggtggacatgagg
aacttcattgctttccaggcccaggtggatggccaggccagcactcaggaaatcctgcag
gagtttgagtccaagctgtccgtggcacagtcctgtgtcttccgagaactgctgagaaat
ctgtgcaatttccatagaactcctggtggggaagggatttggaagctgaagccagaatac
tgctaa
DBGET
integrated database retrieval system
