KEGG   Mus musculus (house mouse): 386612
Entry
386612            CDS       T01002                                 
Symbol
Thoc6, F830014G06Rik, Wdr58
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    386612 (Thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    386612 (Thoc6)
   03041 Spliceosome [BR:mmu03041]
    386612 (Thoc6)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     386612 (Thoc6)
Spliceosome [BR:mmu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    386612 (Thoc6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 NBCH_WD40 WDR54 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP Phage_zn_bind_6
Other DBs
NCBI-GeneID: 386612
NCBI-ProteinID: NP_001008425
MGI: 2677480
Ensembl: ENSMUSG00000041319
UniProt: Q5U4D9
LinkDB
Position
17:complement(23887592..23892891)
AA seq 341 aa
MEHAAPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVVFHAHDGPVYSMVSTDRHLLSAGDGEVKGWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTASGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcatgccgcaccgctcgcggtgcctctgggtcaggctgaggtatttcaggccctg
cagcgactgcacatgaccatcttttcccagagtgtctccccctgcgggaagtttctggca
gctggcaacaattacgggcagattgccatcttcagtttgtctgctgccttaagttcagag
gccaaagaagaaagcaaaaaaccggtggtggtcttccacgcccatgacgggcctgtctac
agcatggtctccacagatcgacacctactcagtgctggcgatggagaggtcaagggttgg
ctttgggcagaaattctcaagaagggctgtaaggaactgtggcgtcgccagcctccatac
aggaccagtctggaagtacccgaaatcaatgccttgctgcttgtccccaaggagaattcg
ctcatcctggctgggggagattgtcagctgcacagtatggatctggaaactggggccttc
acacgggccctccggggccacacagactacatccattgcctggcactgagggagcgcagc
cctgaggtattgtctggcggtgaggatggagctgtacggctttgggatctccgtatagcc
aaagaggtccagaccatcgaagtctacaagcatgaggagtgctcgaggccccataatggg
cgctggattggctgcttggccactgactcagactggatggtctgtggagggggcccagcc
ctcaccctctggcacctcaggtcttccacacccactaccgtctttcctattcgagcacca
cagaagcacgtcaccttctaccaggatctgatcctgtctgctggccagggctgttgtgtc
aatcactggcaactgagcggggagcttaaggcccaggtgcctggctcctccccagggctg
ctcagcctgagcctcaaccagcagccagcagccccagagtgcaaggtcctgactgcatcg
ggcaacagctgtcgagtagatgtctttaccaacctgggctaccgagccttctctttgtcc
ttttga

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