Mus musculus (house mouse): 50505
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Entry
50505 CDS
T01002
Symbol
Ercc4, Xpf
Name
(RefSeq) excision repair cross-complementing rodent repair deficiency, complementation group 4
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03420
Nucleotide excision repair
mmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
50505 (Ercc4)
03460 Fanconi anemia pathway
50505 (Ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmu03032
]
50505 (Ercc4)
03400 DNA repair and recombination proteins [BR:
mmu03400
]
50505 (Ercc4)
DNA replication proteins [BR:
mmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
50505 (Ercc4)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
50505 (Ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
50505
NCBI-ProteinID:
NP_056584
MGI:
1354163
Ensembl:
ENSMUSG00000022545
UniProt:
Q9QZD4
Q3UEU6
LinkDB
All DBs
Position
16:12927600..12969873
Genome browser
AA seq
917 aa
AA seq
DB search
MEPGLSGERRSMAPLLEYERQQVLELLDSDGLVVCARGLGTDRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEIASNSRYEVYTQGGIIFATSRILVVDFLT
GRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENALGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKVFGQNSGWLFLDASTSMFVNARARVYRVPDVKLNKKAKTSEK
TSSPEVQETKKELVLESNPKWEALTDVLKEIEAENKESEALGGPGRVLICASDDRTCCQL
RDYLSAGAETFLLRLYRKTFEKDGKAEEVWVNVRKGDGPKRTTKSDKRPKAAPNKERASA
KRGAPLKRKKQELTLTQVLGSAEEPPEDKALEEDLCRQTSSSPEGCGVEIKRESFDLNVS
SDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRP
GKPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLARG
SAALDAPTDTRKAGGQEQNGTQSSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILT
PELCVERKSVSDLIGSLHSGRLYSQCLAMSRYYRRPVLLIEFDPSKPFSLAPRGAFFQEM
SSSDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEELKQNKPQPDAATAMAITADSETLP
ESDRYNPGPQDFVLKMPGVNAKNCRSLMNQVKNIAELATLSLERLTTILGHSGNAKQLHD
FLHTAYADLVSKGRVRK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggcctgtcgggcgaacggcggagtatggcgccgctgttggagtacgagagg
cagcaggtgctggaactgctcgacagcgacgggctggtggtgtgtgcccgcggactcggc
accgaccggctcctctaccatttcctgcggcttcactgccacccggcctgcctggtgctg
gtgctcaacacgcagccggccgaggaggaatattttatcaatcagttgaagatagaagga
gttgaacatctccctcgacgagtgacaaatgaaatcgcaagtaacagtcgctatgaagtc
tacacgcagggtggtattatatttgcaacaagccgaatactcgtggttgatttcttgaca
ggtagaataccttcagatttaataactggcatcctcgtgtacagggcacacagaatcatt
gagtcctgccaggaagccttcatcctgcgcctcttccgccagaaaaacaagcgcgggttc
atcaaagctttcaccgacaacgctgttgcctttgacactggcttttgtcacgtggaaaga
gtgatgcggaacctttttgtgaggaagctctacctgtggccaaggttccatgtagcagtc
aactcattcttggaacaacacaagcctgaagttgtagagattcacgtgtccatgactccc
gccatgcttgccattcagacggccatactagacatcttaaatgcatgtctgaaagaactg
aaatgtcacaacccgtcacttgaagtagaagatttgtcactagaaaacgctcttgggaag
ccattcgacaagacaatccgccattacttggaccctttgtggcatcagcttggagccaag
actaaatccttggtgcaggatttaaagatactaagaaccttactgcagtatctctctcag
tatgattgtgttacatttctgaatcttctggaatctctgagagcaacagagaaggtgttt
ggtcagaattcaggttggcttttcctggatgctagcacctccatgtttgtgaatgctcgt
gcccgagtttaccgagttccagatgtcaaactgaacaaaaaggccaaaacatcagaaaag
acgtcgagtccagaagttcaagaaacaaaaaaagaactggttctagagagcaatccaaag
tgggaggcgctgactgacgtcctgaaagaaatcgaagcagaaaataaggagagcgaagcc
cttggtggcccaggccgggtgctgatctgtgcaagcgatgaccgcacgtgctgccagctg
agagactacctgtccgccggagcagaaaccttcctgctgcgactttataggaaaactttt
gagaaggatggcaaagctgaagaagtgtgggtaaatgttagaaagggggacggcccgaag
agaactacaaaatctgacaaaagaccaaaagccgctccaaacaaggagcgtgcttccgcc
aaaaggggggcccctctcaaaaggaagaagcaagagctgactctgacgcaagttttgggg
tccgctgaggagccgccggaggacaaggctttggaggaagacctgtgcagacagaccagt
agtagcccagaaggctgcggggtagagattaagcgtgaatcatttgatttaaatgtgtcg
tctgatgcggcctatggcatcctgaaagagcccctgaccatcatccatccgcttctaggg
tgcagcgacccctatgccctgacgcgggtactgcacgaggtggagcccagatacgtggtt
ctgtatgatgcagagctcacctttgttcgccaactggagatctacagggctagcaggcct
gggaaacctctgagggtttactttcttatatacggaggctccacggaagagcagcgctac
ctgactgctctgcggaaagaaaaggaagcctttgaaaagctcataagagaaaaagctagc
atggttgtccccgaagaacgggaaggcagagatgagaccaacctggacctagcaagaggc
tcagcagccctggatgctcccacggacactcggaaagccggtggccaggagcagaatggc
acccagtccagcatcgtggtggacatgcgtgagtttcggagcgagctcccatctctgatc
catcggcggggtattgacatagagccagtgactctggaggtgggtgattacatcctgaca
cctgagctgtgtgtggagcgcaaaagtgtgagcgacctcattggctcgctgcacagtggc
cgcctgtacagccagtgcctagccatgtctcgctactaccggaggcctgtgctgctcatt
gagtttgacccgagcaagcccttctccctggcgccacgaggtgccttcttccaggagatg
agcagcagcgatgtgagctccaagcttacgctcctcaccttgcacttcccgcgtttgcgg
ctgctctggtgcccctcaccccacgccacagccgagctgtttgaggagctgaagcagaac
aagccacagcctgatgcggccacagccatggccatcaccgcagactcagagacactgcct
gagtcggacagatataaccccggcccccaagactttgtgctgaagatgcctggggtcaac
gccaagaactgtcgctccctgatgaaccaagtgaagaacatcgcagagctggccaccctg
tccctggaacgactcacaaccatcctggggcactcgggaaatgccaagcagctgcacgac
ttcctgcacactgcctatgcagacttggtgtccaaaggcagagtgagaaagtga
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integrated database retrieval system
