Mus musculus (house mouse): 83995
Help
Entry
83995 CDS
T01002
Symbol
Mmp1a, MMP-1a, Mcol-A, Mcola
Name
(RefSeq) matrix metallopeptidase 1a (interstitial collagenase)
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03320
PPAR signaling pathway
mmu04657
IL-17 signaling pathway
mmu04926
Relaxin signaling pathway
mmu05171
Coronavirus disease - COVID-19
mmu05200
Pathways in cancer
mmu05219
Bladder cancer
mmu05323
Rheumatoid arthritis
mmu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
83995 (Mmp1a)
09152 Endocrine system
03320 PPAR signaling pathway
83995 (Mmp1a)
04926 Relaxin signaling pathway
83995 (Mmp1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
83995 (Mmp1a)
09162 Cancer: specific types
05219 Bladder cancer
83995 (Mmp1a)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
83995 (Mmp1a)
09163 Immune disease
05323 Rheumatoid arthritis
83995 (Mmp1a)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
83995 (Mmp1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
83995 (Mmp1a)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
83995 (Mmp1a)
Peptidases and inhibitors [BR:
mmu01002
]
Metallo peptidases
Family M10
83995 (Mmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Metallopep
DUF4953
Reprolysin_3
Reprolysin_4
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
83995
NCBI-ProteinID:
NP_114395
MGI:
1933846
Ensembl:
ENSMUSG00000043089
UniProt:
Q9EPL5
LinkDB
All DBs
Position
9:7464141..7476870
Genome browser
AA seq
464 aa
AA seq
DB search
MPSLPLLLLLWAASSYSFPVFHNGDRQNVETVWKYLENYYNLGKNMQAKNVNGKEMMAEK
LRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTP
YLPKAVVEDAIARAFRVWSDVTPLTFQRVFEEEGDIVLSFHRGDHGDNNPFDGPNYKLAH
TFQPGPGLGGDVHYDLDETWTNSSENFNLFYVTAHELGHSLGLTHSSDIGALMFPSYTWY
TEDFVLNQDDINRIQDLYGPSPNPIQPTGATTPHPCNGDLTFDAITTFRGEVFFFKGRFY
IRVNRFMPEPELNLIGILWPNLPVKLDAAYEASMIDQVRYFKGSKVWAVQEQSVLRGFPR
DIHSFFGFPSNVTHIDAAVCEEETGKTYFFVDHMYWRYDENTQSMDPGYPRLTAEDFPGI
DDKVDDVFQKGENFYFFHQSVQHRFNLQIRRVDDSRDSSTWFNC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctagccttcctttgctgttgcttctctgggctgctagctcatacagtttccctgtg
tttcacaacggagaccggcaaaatgtggagacagtctggaaatacctggaaaactactac
aacttgggcaaaaacatgcaagctaaaaacgtgaatggcaaggagatgatggctgaaaag
ctgaggcaaatgcagcagttatttgggctgaaagtgactggaaattcagatcctgaaacc
ctgagagctatgaagaagcccaggtgtggggtgcctgatgtggccccatatgccattact
cacaacaatcctcgttggaccaaaacacatctgacatacagcattttaaactacacacca
tatttgccaaaagcagttgtggaagatgccatcgcgagagcctttagagtctggagtgat
gtgacaccacttacgttccaaagagtctttgaggaggaaggcgatattgtgctctccttc
cacagaggagaccatggtgacaacaacccatttgatggacctaactataagcttgctcac
actttccagccaggcccaggtttggggggtgatgttcattatgaccttgatgagacgtgg
accaacagcagtgaaaatttcaacttgttctatgttacggctcatgaactgggtcactcc
cttgggctcactcattctagtgatataggagcactaatgttccccagttacacgtggtac
actgaagactttgtgctaaaccaggatgatattaatcgcatccaggacttatatggacct
tccccaaatcccatccagccaacaggtgcaacaacaccacatccatgtaatggtgatcta
acctttgatgctataactacatttaggggagaggtgtttttcttcaaaggcaggttctac
attcgggtaaatagattcatgccagaacctgagctcaatttaataggtattctctggcca
aatcttccagttaaacttgacgctgcttatgaagctagtatgatagatcaagtccgctat
ttcaaaggcagcaaagtatgggctgttcaagagcagagtgtactgagaggattccccaga
gacatccacagtttctttggcttccctagcaatgtgacacacattgatgctgctgtttgt
gaggaagagactggaaaaacatacttctttgttgaccacatgtactggaggtatgatgaa
aatacacagtctatggatccaggttatcccagattaacagcagaagacttccctggaatt
gatgataaagttgatgatgttttccaaaaaggagaaaatttctatttctttcaccaatca
gttcaacacagatttaacctccaaataagaagagttgatgattcccgtgattctagtaca
tggttcaactgctaa
Mus musculus (house mouse): 83996
Help
Entry
83996 CDS
T01002
Symbol
Mmp1b, MMP-1b, Mcol-B, Mcolb
Name
(RefSeq) matrix metallopeptidase 1b (interstitial collagenase)
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03320
PPAR signaling pathway
mmu04657
IL-17 signaling pathway
mmu04926
Relaxin signaling pathway
mmu05171
Coronavirus disease - COVID-19
mmu05200
Pathways in cancer
mmu05219
Bladder cancer
mmu05323
Rheumatoid arthritis
mmu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
83996 (Mmp1b)
09152 Endocrine system
03320 PPAR signaling pathway
83996 (Mmp1b)
04926 Relaxin signaling pathway
83996 (Mmp1b)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
83996 (Mmp1b)
09162 Cancer: specific types
05219 Bladder cancer
83996 (Mmp1b)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
83996 (Mmp1b)
09163 Immune disease
05323 Rheumatoid arthritis
83996 (Mmp1b)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
83996 (Mmp1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
83996 (Mmp1b)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
83996 (Mmp1b)
Peptidases and inhibitors [BR:
mmu01002
]
Metallo peptidases
Family M10
83996 (Mmp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Metallopep
Reprolysin_5
DUF4953
Peptidase_M54
Reprolysin_4
Reprolysin_3
Reprolysin_2
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
83996
NCBI-ProteinID:
NP_114396
MGI:
1933847
Ensembl:
ENSMUSG00000041620
UniProt:
G5E8A9
LinkDB
All DBs
Position
9:complement(7367670..7388026)
Genome browser
AA seq
463 aa
AA seq
DB search
MSSLPLLLLLWAASSYSFPVIQDGLQKNVKTVWKYLENYYNLGKNMQAKNVNGKEVMAEK
LRQMQQLFGLKVTGNSDPETLRAMKKPRCGVPDVAPYAITHNNPRWTKTHLTYSILNYTP
YLSKAVVEDAIARAFRVWSDVTPLTFQRVFEEEGDIVLSFHRGDHGDLYTFDGSKYHFAH
AFLPGLGLGGNVHYDLDQKWTDNNEDFNLFYVTAHELGHSLGLSHSNDEEALMFPSYTWS
NKDFVLNQDDINRIQALYGPSPNPIQLTDATLDPCNSGLTFDAIITYRGEVIFFKDRFYI
RVISFLPEPLIDVIDLIWPNLPGKFDAAYEVSGVDELRFFKGSKVWAVQEQNVLEGFPMD
IQSFFGFPSNVTNIDAAVCEEETGKTYFFVDHMYWRYDENTRSMDPGYPRLIAEDFPGID
YKVDDVIQKEDNFYFFHQSIQYRFNLKTRRIDDSSDINTWFNC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccttcctttgctgttgcttctctgggctgccagctcatacagtttccctgtg
attcaggatggactccagaaaaatgtgaagacagtctggaaatacctggaaaactactac
aacttgggcaaaaacatgcaagctaaaaacgtgaatggcaaggaggtgatggctgaaaag
ctgaggcaaatgcagcagttatttgggctgaaagtaactggaaattcagatcctgaaacc
ctgagagctatgaagaagcccaggtgtggggtgcctgatgtggccccatatgccattact
cacaacaatcctcgttggaccaaaacacatctgacttacagcattttaaactacacacca
tatttgtcaaaagcagttgtggaagatgccatcgcgagagcctttagagtctggagtgat
gtgacaccacttacgttccaaagagtctttgaggaggaaggcgatattgtgctctccttc
cacagaggagaccatggtgacctctacacatttgatggatctaaatatcactttgctcat
gcttttctgccaggcctaggtttggggggcaatgttcattatgatcttgatcagaagtgg
accgacaacaatgaggatttcaacttgttctatgttacggctcatgaactgggtcactcc
cttggactctcccattctaatgatgaagaggcactaatgttccccagctacacatggagc
aataaagactttgtgctaaaccaggatgatattaatcgcatccaggccttatatggacct
tccccaaatcccatccagttaacagatgcaacactggatccatgtaatagtggtctaacc
tttgatgctataattacatatcggggggaggtgatattctttaaagacaggttctacatt
cgggtaattagcttcctgccagaacctttgatcgatgtgatagaccttatctggccaaat
ctgccaggtaaatttgatgcagcttatgaagttagtggggtagatgaactccgctttttc
aaaggcagcaaagtatgggctgttcaggaacagaatgtactggaaggatttcccatggac
atccagagtttctttggcttccctagcaatgtgacaaacattgatgctgctgtttgtgaa
gaagagactggaaaaacatacttctttgttgaccacatgtactggagatatgatgaaaat
acacggtccatggatccaggttaccccagattaatagcagaagactttcctggaatcgac
tataaagttgatgatgttatccagaaagaggataatttctatttctttcaccaatcaatt
caatacagatttaacctcaaaacaagaagaattgatgattccagtgatattaatacttgg
ttcaactgctaa
DBGET
integrated database retrieval system