KEGG   Microcebus murinus (gray mouse lemur): 105858049
Entry
105858049         CDS       T07238                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14004  protein transport protein SEC13
Organism
mmur  Microcebus murinus (gray mouse lemur)
Pathway
mmur03013  Nucleocytoplasmic transport
mmur04141  Protein processing in endoplasmic reticulum
mmur04150  mTOR signaling pathway
mmur05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mmur00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105858049
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105858049
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    105858049
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105858049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmur03019]
    105858049
   04131 Membrane trafficking [BR:mmur04131]
    105858049
Messenger RNA biogenesis [BR:mmur03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105858049
Membrane trafficking [BR:mmur04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    105858049
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    105858049
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    105858049
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR3_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st EIF3I Beta-prop_EML_2
Other DBs
NCBI-GeneID: 105858049
NCBI-ProteinID: XP_020140845
LinkDB
Position
19
AA seq 136 aa
IAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRV
SWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNIP
NLHNSLNGSSAGRKQS
NT seq 411 nt   +upstreamnt  +downstreamnt
attgcatttgctccaaatttgggaagatctttccatattctagcaatagcaaccaaagat
gtgagaatttttacattaaagcctgtgaggaaagaacttacttcctctggtgggccaaca
aaatttgaaatccatatcgtggctcaatttgataatcataattcccaggtctggcgagtg
agttggaatataacaggaacagtgctagcatcttcaggagatgatggctgtgtacgattg
tggaaagctaattatatggacaattggaagtgtactggtattttgaaaggtaatgggagc
ccagtcaatgggagttctcagcagggaaactcaaatccttccctaggttcaaatattcca
aaccttcataattcattaaatggatcttctgctggcagaaagcagagctga

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