Microcebus murinus (gray mouse lemur): 105872697
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Entry
105872697 CDS
T07238
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04151
PI3K-Akt signaling pathway
mmur04510
Focal adhesion
mmur04512
ECM-receptor interaction
mmur04518
Integrin signaling
mmur04820
Cytoskeleton in muscle cells
mmur04974
Protein digestion and absorption
mmur05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105872697
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105872697
04518 Integrin signaling
105872697
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105872697
09142 Cell motility
04820 Cytoskeleton in muscle cells
105872697
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105872697
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
105872697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmur04147
]
105872697
00536 Glycosaminoglycan binding proteins [BR:
mmur00536
]
105872697
Exosome [BR:
mmur04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105872697
Glycosaminoglycan binding proteins [BR:
mmur00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105872697
Hyaluronan
Extracellular matrix or blood plasma proteins
105872697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
105872697
NCBI-ProteinID:
XP_012622376
Ensembl:
ENSMICG00000049371
LinkDB
All DBs
Position
1:complement(7822079..7964726)
Genome browser
AA seq
2273 aa
AA seq
DB search
MKMLLILFLIIVCSHVSVNKDPGPEYADVVFLVDSSDHLGTKSFPFVKAFVTKMINSLPI
EAGKYRVALAQYSDQLHSEFQLSTFKSRNPMLNHLKKNFGFMGGSLRIGHALQEAHRTFF
SAPTNGRDKKQFPPILVVLASAESEDDVEEASKALRKDGVKIISVGMHKASEENLKSMAT
SQFHFNLRTVRDLSTFSQNMTQIIKDVTKYEEAGVDDAIVEVCQGPSVADVAFLFDMSAN
GSQENFDYLKEFLEESVSALDIKENCMRVGLVAYSNETKVINSLSGGVNKSEVLQNIQNL
SPQAGKAYTGAAIRKIKKEVFRAQNGSRKNQGVPQIAVLVTHRPSEDNVTKAALNLRREG
VTIFTLGIEGASDAQLEKIASHPAEQYVSKLKTFSDLAAHNQTFLKKLRNQITHTVSVFS
ERTEALKSGCVDTEEADIYLLIDGSGTTQPTDFQEMKTFLSEVVGMFNIGPHKVRVGAVQ
YADSWDLEFEINKYSNKHDLGRAIENIRQMGGNTNTGAALNFTLSLLQKAKKQRKTKVPR
HLVVLTNGMSEDSVLEPADRLREEHIRVYAIGIREANQTQLREIAGEEKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLENFSKMKTFMKNLVSKSQIGADRV
QIGVVQFSDINKEEFQLNKFTTESDISDAIDRMAHIGETTLTGSALTFVSQYFSPSKGAR
PNVRKFLILITDGEAQDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKDFMTGLVKKA
DVGKNQVRFGALKYADDPEVLFYLDDFDTKWEVISVLQKDQPMGGNTYTAEALAFSDHMF
TEARGSRLHKGVPQVLIVITDGESHDANKLNATAKALRDKGILVLAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIDKVDLVFLMDGSNSIHPNDFKKM
KEFLASIVQDFDVSLNRVRIGAAQFSHIYQPEFPLGTFTGEKEISLQIENIQQIFGYTHI
GAALQQVGHYFQPDKGSRINTGTPQVLLVLTDGQSQDEVAQAAEALRHKGIDIYSVGIGN
VDDQQLIQITGTADKKLTVDNFDELKKVKKRIVRHICTSGGESNCFVDVVVGFDVSTQQK
GQVLLEGQSWMGAYLQEILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSE
NILSSLKGVTVKGPSLLNANLLSSLWDTFQNKSAARGKVVLLFSDGLDDDIEKLEQKSDE
LRKKGLNALITVALDGSVDPSDSSDLLYIEFGKGFEYRTQLTIGMRDLGSRLSKQLVNVA
ERTCCCLFCKCIGGDGSIGDSGPPGKKGSPGFKGSEGYLGEEGIAGDRGAPGPVGEQGTK
GCRGAKGPKGSRGLSGQEGEVGEIGIDGLNGEQGDIGFPGRKGEKGDEGSQGSPGKRGTP
GDRGAKGLQGDPGVPGFDNSIEGPKGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGQRGQ
TGPQGNTGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGALGSKGPQGPPGPGGEAGNQGH
LGIQGNKGEPGDLGEKGAIGFAGPRGLPGNDGSPGYGTVGSKGAKGQEGFPGESGPKGEI
GDPGDPGETGPKGARGKMVSAGLPGEQGSPGEPGPPGRKGVKGARGSASFSTCELIQYVR
DHSPGGHGKPECPVHPTELVFALDQSRDVTEEAFARMKGMMASLLRGVRVRESSCPVGAR
VAVLSYDAQARHLVRFSDAYGKGRLLREIDAIPYERSSAGREIGKAMRFISRNVFKRTLP
GPRARRVATFFSGGQSPDAQAVAAAAMEFSALDIVPVVVAFGSAPAVRRAFAIDDTGTFQ
VIVVPSGPEADYTPALERLQRCTFCYDICKPDASCDQARPPPVLSYMDAAFILDGSRNVG
SADFEDIRGFLGALLDNFEITPEPETSVTGDRVALLSHAPPNFLPNTQKSPVRAEFNLTT
YRSKRLMKRHVEESVQQLNGDAFVGHALQWTLDNIFLSAPNLRSNKVIFVISAGETSHLD
EETLKKESLRAKCQGYALFVFSLGPTWNDKELEDLASHPLDHHLVQLGRIHKPDHRYGVK
FMKSFINSVRRAINKYPPIHFKTKCNRLSSTDPRQPPRQSRSFVPGSHKAALKEDTLREA
KFFQDKKYLSRIARSGRDAIQNFTRNTSHTFKNGKKVITPKQHGKGSAGTISP
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctactgattttgttcctcataatagtttgttcccatgtttctgtgaataaa
gatcctggccctgagtacgcagatgtggtgtttctggtggacagctctgatcacctggga
actaagtccttcccgtttgtaaaagccttcgtcaccaaaatgatcaacagtctccccata
gaggccggcaaataccgcgtggccctggcccagtacagcgaccaactccacagcgaattc
cagctgagcaccttcaagagcaggaaccccatgttgaaccacctcaagaagaatttcggg
ttcatgggcgggtccctgaggataggacacgctctccaggaggctcacaggactttcttc
tctgcacccacaaatggcagggacaagaagcagtttcccccgattttggtggtcctggct
tcggccgagtctgaggatgacgtggaagaggcttcaaaggccctgcggaaagacggggtg
aagatcatctctgtggggatgcacaaggcctccgaggaaaacctgaagtccatggccacg
tcccagtttcatttcaaccttcggaccgtcagagacctcagcacgttttcccagaacatg
acgcagatcatcaaggatgtgacaaagtacgaggaagcaggagttgatgatgccattgta
gaagtttgccaaggcccttctgtggccgatgtcgcgttcctgttcgatatgtctgccaat
ggaagccaggagaactttgactaccttaaagaattcctggaagaaagtgtctctgccctc
gacataaaggaaaattgcatgagggtgggcctcgtggcctatagcaacgagacgaaggtg
ataaattcactgagcgggggtgtaaataagtcggaggttctccagaacatacagaacctc
tctccccaggccgggaaggcctacaccggagctgccatcagaaagatcaagaaggaagtc
ttcagagcgcagaatggcagccggaagaatcaaggggtgcctcagattgcagtgctggtg
acccacagaccttcggaagacaacgtgacgaaggcagcccttaacctccggcgcgagggc
gtgaccatcttcaccttgggcatcgagggcgctagtgacgcccagctggaaaagatagca
tcccacccggctgagcagtatgtctccaaactgaagaccttctctgacctggctgctcac
aaccagacctttctgaagaagctgcggaaccaaataacacacacggtctctgtcttttca
gaacggacggaagcactcaaatctggttgtgtggacactgaggaagccgacatctacctg
ctcattgatggctcaggcaccacccagcccacagatttccaagaaatgaagaccttcctg
tccgaggtggtaggcatgttcaacattggtccccacaaggtgagggtcggggccgttcag
tacgccgacagctgggacttggaatttgagatcaataaatactcaaacaagcatgatttg
ggaagggccattgagaacatcaggcagatgggggggaataccaacacgggtgcagcgctg
aatttcacactgagcctcttgcaaaaagctaagaagcagcgaaagaccaaagtgccacgt
caccttgtcgtgctgacgaacggcatgtctgaggatagcgtcttggagcctgcggacaga
ctgagagaagagcacatccgtgtctacgccatcggcatcagggaggctaaccaaacacag
ctgagagaaatcgcaggcgaggaaaaaagagtgtactatgtgcatgacttcgatgctttg
aaagacataagaaaccaagtcgttcaagaaatctgtgctgaggaagcctgcaaagagatg
aaagctgacatcatgttcctggtggacagttctggcagtataggacttgaaaacttcagt
aaaatgaaaacatttatgaaaaacctggtgagcaaatctcagattggggcagatcgggta
caaattggtgtagtccaattcagcgacatcaacaaggaggagtttcagctcaacaaattc
acaactgaaagtgacatttcagatgcaatagaccgaatggctcacattggagaaaccacc
ttgaccggtagtgccctgacctttgtgtctcagtacttcagccccagcaagggggcccgg
cccaatgtcaggaagtttctcatcctcatcacggatggtgaagctcaggacatagtaaag
gacccagcggtagctcttcggcaagaaggcataattatctactctgtgggagtgtttggc
tccaatgtcactcagcttgaggagatcagcgggaggcctgagatggttttttacgttgag
aattttgacattctgcagcacattgaagatgatctcgtttttggaatatgcagtccccgt
gaagaatgcaagcggattgaagttttggatgtcgtgtttgtgatcgacagctctggcagc
attgactacgatgagtataatatcatgaaggactttatgactggcttagtgaaaaaagcc
gatgttggcaagaatcaggtccggtttggggctctgaagtatgccgatgacccagaggtg
ctgttttatctggacgactttgacacaaaatgggaggtgatttcagtgctccagaaggac
cagcccatggggggcaacacttacactgctgaggcgctagccttctcagaccacatgttc
accgaagcccggggcagccgcctgcacaagggggtcccccaagtcctcatcgtgatcact
gatggggaatctcatgatgccaataagctcaatgccacagcaaaggccttgcgggacaaa
ggcattcttgtcctggccgtggggattgctggcgccaatcccgtggagctgttagccatg
gcagggtcaagtgacaagtacttcttcgtggagacttttggaggcctgaaggggatattc
tcagatgtgtcagccagtgtctgtaactcttcaaaagtagattgtgaaattgataaagta
gatcttgttttcctcatggatggttcaaatagcattcatccaaatgacttcaagaagatg
aaggaatttttagcatctatcgttcaagactttgatgtcagcctcaacagagtgcgtata
ggagcagcccagtttagccatatctatcagccggagtttccgctgggaactttcacaggc
gaaaaggagatatcacttcagattgaaaacatccagcagatctttggatatacacatatc
ggcgcagcactccagcaggtgggacattacttccagccagacaagggcagcaggataaac
acaggtaccccccaggtgttgctggtccttactgatggccagtcccaagacgaggtggcc
caggctgccgaagccctgagacacaaaggcatcgacatctattccgtgggcatcgggaat
gtggacgaccagcagctcattcagatcaccgggactgcggataaaaaactgacagttgat
aactttgatgaactgaaaaaggtcaaaaaaaggattgttcgccacatctgtacctcgggg
ggcgagagcaattgctttgtggatgttgtggtgggatttgatgtctcaactcagcagaaa
gggcaggtgttgctcgaaggccagtcttggatgggagcctaccttcaagaaatcttacgt
gccatcagctccctcaatggggtgagctgtgaggtgggcacagagactcaggtcagtgtg
gcttttcaagtgacaaatgccatggaaaagtattctcccaagtttgagatctacagtgaa
aacatactgagcagcttgaaaggtgtaacagttaaaggaccatctcttctcaatgcaaac
ctcttgagttctctatgggatacatttcagaataaatcggctgctcgaggaaaggtggtc
cttttattttcagatggattggacgatgacattgaaaaacttgaacaaaaatctgatgaa
cttagaaagaaaggcctgaatgccctcatcactgttgctctggacggatctgtcgacccc
agtgactccagtgatcttctctacattgaatttgggaaaggatttgagtacaggacacag
cttactatcggcatgagggatcttgggagccggctgtcaaagcagctggtcaatgttgct
gaaaggacatgctgctgtttgttctgcaagtgcattggaggagatggctcaatcggagat
tctggaccaccagggaaaaagggatccccaggttttaaaggcagcgaaggttacctggga
gaggagggcattgctggagacagaggagcccctggacccgtgggagagcaaggtactaag
ggatgccgtggagccaaaggtcctaagggaagcaggggactaagtggacaggagggagaa
gttggggaaattggaattgatggattaaatggagaacagggtgacattggttttcctgga
agaaaaggagaaaagggtgatgagggatcccagggaagcccaggaaagagagggactcct
ggtgaccgtggagcaaagggcctgcaaggagatcctggagtccccggatttgataatagc
atagaaggacccaagggcttgaagggagaacgtggaagacaaggtagaagaggctggcca
ggccctcccggaacaccaggctccagaagaaagacagctgctcatggccaaaggggacaa
acaggtccacagggaaacacaggcattccaggcccagatggacttgaaggctcactggga
cttaagggccctcagggcccaagaggagaggctggtgtgaaaggagaaaaaggagcccta
ggaagtaaaggcccccaggggcccccaggacccggaggagaagcagggaatcaaggccat
ttgggaatccaaggaaataaaggagaacctggagatctgggagaaaaaggagctattggc
tttgctggtcctcgaggcttgccgggtaatgatggcagtccaggctatggtacagttgga
agtaagggagcaaaagggcaagaaggattccctggagaaagtggacctaagggtgagatt
ggggaccctggtgacccaggagagactggacccaagggagctagaggcaaaatggtgtct
gctgggcttccaggagagcaaggatcccctggggagccaggacctcctggacgcaagggt
gtgaaaggtgccagaggatcggcctcattttctacatgtgagcttattcagtatgtgcga
gatcacagtcctggtggacacggaaaacccgaatgcccggtgcatccgaccgagttggtg
ttcgcgctagaccagtcccgggacgtcacggaggaggcattcgcgcggatgaaggggatg
atggcctcgctgctgaggggcgtcagagtccgggagagcagctgcccggtgggggcgcgc
gtggccgtcctctcctacgacgcccaggccaggcacctggtccgcttctcggacgcctac
ggcaagggccggctcctgcgggagatcgacgcgatcccgtacgagaggtcctcggccggc
cgcgagatcggcaaagccatgaggtttatttccaggaacgtcttcaagcggacgctcccg
gggccgcgcgcgaggagggtcgccaccttcttcagcggcggccagtcccccgacgcgcag
gccgtggccgcggccgccatggagttcagcgcgctggacatcgtgcccgtggtggtggcc
ttcggcagcgcgcccgccgtccggcgcgccttcgcgattgacgacactggcacgtttcaa
gtaatagtggttccctctgggcccgaggccgactacacaccagcgttagagagactccag
cggtgcactttctgctacgatatatgcaagccggatgcttcttgtgatcaagccaggcca
ccccctgtgctgtcttacatggatgctgctttcattctggatggctcccggaatgtagga
agtgctgactttgaagacataagaggcttcctgggagcactgttagataattttgaaatc
accccagagcctgaaacctctgtcactggagaccgggtggccctattgagccatgctccc
cccaacttcctacccaacactcagaagagtcctgtcagagcagagttcaaccttactacc
taccgcagtaagcgcctcatgaagaggcacgtagaagaatcggttcagcaactaaatgga
gatgcttttgttggccatgccttacagtggactctggacaatatctttttaagtgcaccc
aatctgagaagtaacaaagtcatatttgtgatatctgctggggaaaccagtcacttggat
gaggaaactttaaagaaagaatctttgagggctaaatgtcagggatatgccctatttgtg
ttttcccttggccctacttggaatgataaggaactggaagatctggccagccaccctttg
gatcaccacttggtccagcttggccgaattcataaacctgaccacagatatggtgtgaag
tttatgaagtcttttataaactcagtcaggcgtgcaatcaacaagtacccaccaatacac
ttcaaaacaaagtgcaacagactcagctctacagatccaaggcagcctccgcgacagtct
cgaagctttgttcctggatcacataaagctgccctcaaagaagatacgttacgggaggca
aaattctttcaagataaaaagtatctttcaagaatagcaagaagtggcagagatgctatt
caaaattttaccagaaacacatcccatacttttaaaaatggaaaaaaggtaataactccc
aaacaacatggtaaaggaagtgctggaacaatttcgccttaa
DBGET
integrated database retrieval system