Microcebus murinus (gray mouse lemur): 105883681
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Entry
105883681 CDS
T07238
Symbol
COL9A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur04151
PI3K-Akt signaling pathway
mmur04510
Focal adhesion
mmur04512
ECM-receptor interaction
mmur04820
Cytoskeleton in muscle cells
mmur04974
Protein digestion and absorption
mmur05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105883681 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105883681 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105883681 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105883681 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105883681 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
105883681 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmur00535
]
105883681 (COL9A1)
Proteoglycans [BR:
mmur00535
]
Extracellular matrix (ECM) proteoglycans
Others
105883681 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
105883681
NCBI-ProteinID:
XP_012642479
Ensembl:
ENSMICG00000003102
UniProt:
A0A8C5XRN4
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Position
6:complement(46483650..46551478)
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AA seq
684 aa
AA seq
DB search
MTWTARNRGALGLLLSGLCLCAAQRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPGP
QGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGPRGFPGRGIPGPP
GPPGTAGLPGELGRVGTVGDPGRRGPPGPPGPPGPSGAIGFHDGDPLCPNSCPPGRSGYP
GLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEK
GARGLDGEPGPQGLPGVAGDQGRRGPLGEAGPKGDRGAQGSRGIPGPPGPKGDTGLPGVD
GRDGIPGMPGTKGQPGKHGPPGDAGLQGLPGVPGIPGAKGVAGAKGTTGAPGKPGQLGNS
GKPGQQGPPGEVGPRGPRGLPGNRGEIGPAGAPGLPGKLGPVGSPGLPGLPGPPGLPGMK
GDRGVVGEPGPKGEQGPSGEEGEAGRRGELGDIGLPGPKGSVGNPGEPGLRGPEGIRGLP
GVEGPRGPPGPRGVQGEQGATGLPGVEGPPGRAPTDQHIKQVCIRVMQEHFAEMAASLKR
PDSGVSGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGMKGPPGALGLRGPKGDLGEKGER
GPPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPAGPPGFCEP
ASCTVQLVSEPLAKGPIREGLSAA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacctggacggcgcgcaaccgcggggccctcgggctgctgctgtcggggctctgcttg
tgtgcggctcaaagaggtccccctggcgagcagggtccccctgggcctccagggcccccc
ggggttccgggcattgatggcattgatggtgaccgaggcccaaagggtcccccaggtccc
cagggtcccgcgggagagccgggaaagccaggcgctccgggcaagcccggcacacccgga
gctgacggattaacaggacctgatggatcccctggctccgttggaccaaggggacaaaaa
ggagaacctggtgtacctggacctcgtggatttccaggtcgtggtattcctggaccccct
gggcctcctgggacagcaggactccctggagagcttggccgtgtaggaactgttggtgac
cctgggagaagaggaccacctgggccccccggccccccaggacccagtggagcaattggc
tttcatgatggagatccactgtgtcccaattcctgtccaccaggccgctcaggatatcca
ggcctaccaggaatgaggggtcataaaggggctaaaggagaaattggtgaaccaggaaga
caaggacacaagggtgaagaaggtgaccagggagaactgggagaagttggagctcaagga
cctccaggagctcaaggtttgagaggcatcaccggcatagttggggacaaaggagaaaaa
ggtgctcggggcttagatggagaacctgggcctcagggtcttcctggtgtagctggtgat
caaggacggcgaggacctctgggagaagcaggtcccaagggagacagaggggctcaaggt
tctagaggaattcctggtccccctgggcccaaaggggacacgggcttgccaggtgtggac
ggccgtgacgggatccctggaatgcctggaacaaagggtcaaccagggaaacatgggcct
cctggtgatgcaggattgcaaggattaccaggtgtgcctggaattcccggtgcaaagggt
gttgccggtgcaaagggtactacaggtgctccagggaagcctggtcagttgggaaattca
ggcaaaccgggccaacaggggcctccaggagaggtgggaccccgaggaccccggggactg
cctggcaatcggggagaaataggacccgcaggagccccaggcctaccaggtaaactgggt
cctgttgggagccctggcctcccaggcttgcctgggccccctggacttccaggaatgaaa
ggtgacaggggtgtagttggtgaacctggtccaaagggtgaacagggaccctctggtgaa
gaaggtgaagcaggaagaaggggtgaacttggagatataggattacctggcccaaaggga
tctgtgggtaatcctggggaacctggcttgagaggacctgaaggaattcgggggcttcct
ggagtggaaggaccaagaggaccgcctggaccccgaggagtgcagggagaacaaggtgcc
accggcctgcctggtgtcgagggccctccgggtagagcaccaacagatcagcacattaag
caggtttgcataagagtcatgcaagagcattttgctgagatggctgctagtctcaagcgt
cctgactctggtgtctctggcctccctgggcggcccggtccccctgggccccccggcccc
cctggagagaatggcttcccaggtcagatgggaattcgtgggcttccaggcatgaaaggt
ccccctggagctcttggtttgagaggaccaaaaggtgacttgggagaaaagggggagcgt
ggccctccaggaagaggtcctaaaggtttgcctggagctacaggtcttccaggtgaccca
ggccctgccagctatgggagaaatggccgggacggtgagcgaggccccccaggggtggca
ggaattcctggtgtgcctgggccccccggacctgctggccctcccggtttctgtgagcca
gcctcctgcaccgtgcagctggtcagcgagcctttagcaaagggcccgatccgtgaaggg
cttagtgctgcataa
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