Merops nubicus (carmine bee-eater): 103778730
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Entry
103778730 CDS
T08417
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103778730 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnb03019
]
103778730 (CNOT1)
Messenger RNA biogenesis [BR:
mnb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103778730 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103778730 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
103778730
NCBI-ProteinID:
XP_008944581
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCMTELE
QHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaaccggcacggg
cccgaggcagacaggcatttactacgctgcctattctcgcacgtggatttcagtggcgat
ggtaaaagcagcggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaacccaacttcatctcgacgctgtcctacgccattgacaatcccttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctggctttactgaactctttcagctcggat
ctacgaggttttgctgcccagtttatcaaacagaaactcccagatcttctgcgctcttac
attgacgcggacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtcggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggaacgttgccct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaacaatgatggagagttctctggcagatttcatgcaa
gaagttggctacggcttttgtgcaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgtgcgggaggtcacggctgcccaggttgccagggttctagggatgatggctcggact
cattcgggattgacggatggcattccattacaatctatttcggctcctggcagtgggatt
tggagtgatggcaaagataaaagtgatggaacacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagaactgaatccaagccttgacttcaaagtagtaacttatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgttgtgtttggc
atccaaagagggctgggcatggaagtttttccagttaatgccatatacagaccttggaag
cacgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
ttcgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggatttgattgaatctctgttacgattg
gcagaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttactgcagatcaacacatcctggcacaccttgcgccat
gaactcatctccacgctcatgcccattttccttggcaaccatcccaactcggccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagctcatcatgcat
gcaatggcagaatggtacatgagaggggagcagtacgaccaggcaaaattgtcacgtatc
cttgatgtggctcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggaacccttcatccaggcctgtatgactttccta
aagagaagatgtccatctatccttggtggccttgctccagaaaaagatcagcccaaaagt
gctcagcttcctccggaaactttggcgacgatgttggcgtgtctgcaagcttgtgctggg
agtgtttctcaggagctgtcggagacgatcctgaccatggtggccaactgcagtaacgtc
atgaacaaggcgaggcagccgccccccggggtcatgccgaagggacgcccgcccagcgcc
agcagcttggatgccatctcgcccgtgcagatcgactcgcttgcagggatggcatctctg
agcttgggtggctcagctgctcctcatacccagagcatgcaaggctttcctccaaacctg
ggctctgcattcagtactcctcagtcaccagcaaaagccttcccccctctttccacccaa
aaccagacaacaggtttcagtggcatcggagggctctcttcacagctcccagtaggtggt
ctcactacgggtagcctgacaggcataggaactggagccctgggccttcctgcagtgaac
aacgaccctttcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaaccagcacttt
agcaaagaaatagatgacgaggccaacagctacttccagcggatttacaaccaccctccg
catcccaccatgtctgtggatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaatacaga
ttctttccccagtacccagataaagagctgcacattacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccacaccatttacaggagtacatagaatacggacaacaatccagagat
cctcctgtgaagatgcagggttcaatcaccaccccaggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccgaccaactggagtc
agcttcaagaaagatgtgccgccttccattaatactaccaacattgatacgctgttagta
gcaacagatcaaactgagagaattgtggaacctccagagaatgtccaggaaaaaatcgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagagttgaaggaa
acagtgaaagaagagttcatgccttgggtatcgcagtatcttgtgatgaagcgagtcagt
attgagcccaactttcacagcttgtattcaaacttccttgacacgcttaagaatccggag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttaaagaacctgggtcactggctggga
atgattacactggctaaaaataaacccatcttgcacacggatttggatgtgaaatcgctg
ctactggaagcatatgttaagggacagcaggagctgctttacgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccatggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgcctgaagaacctggatgaacagctgtctgctccaaag
aaggatgtgaagcagccagaagagctaccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttaccat
gacatcaacgtctattctttaggagggttggctccacacataaccttaaatccaacaatc
cctctgttccaagcccacccgcagctgaagcagtgcgtgcggcaggcgatcgagcgggcg
gtgcaggagctggtccacccggtggtggaccggtccatcaagatcgccatgaccacctgc
gagcagatcgtcaggaaggacttcgccctggactcggaggagtcgcggatgcgcgtggcc
gcccaccacatgatgcggaacctgacggccggcatggccatgatcacctgcagggagcct
ctgctcatgagcatcgccaccaacctgaagaacagcttcgccactgcgctgagggcagcc
tccccccagcagagggacatgatggagcaggcagctgcccagctcgcacaggataactgt
gagctggcgtgctgcttcatccagaagacagctgtggaaaaggcaggacctgagatggat
aagagactcgcaactgaatttgagctcaggaagcacgcgagacaggagggccgtcggtac
tgcgatcctgtcgtgttaacctaccaggctgagcggatgccagaacagatcaggttaaag
gttggaggtgtggaccctaagcagctggctgtttatgaagagtttgcacgcaacgtccct
ggcttcttgcctaccaatgacttaactcagcccacaggattcttggctcagcctatgaag
caagcttgggctacagatgatgtagcccaaatatatgacaaatgtatgacagaactggag
cagcacctgcagtccattccacacactctggccatgaaccctcaagcccaagcgttgcgc
agcctcttggaggctgtggtggtggctcgtaactcccgcgatgctattgctgcacttgga
ctattgcagaaggctgtagaaggtttgctggatgccaccagcggggcagatgctgacctc
ctgcttcgctaccgggagtgtcatctgctcgtgctgaaggctctgcaggacggccgtgcc
tatgggtccccgtggtgcaacaaacaaatcactaggtgcttgattgaatgcagagatgag
tacaagtacaatgtggaagccgtggagctgctaatccgcaatcaccttgttaacatgcag
cagtatgacctgcacttggctcagtcaatggagaatggcttgaactacatggctgtggca
tttgccatgcagctggtaaagatcctgctggtggatgagagaagcgtggcccacgtaacg
gaggcagatctgttccacaccatcgagacactcatgaggattaatgcccattccagagga
aacgcccctgaaggattaccccagttaatggaagtggtccgatccaactacgaagcaatg
attgaccgtgctcacggagggcccaatttcatgatgcattcaggcatttctcaagcctct
gagtatgatgatcctccaggtctgagggagaaggcagaatacctgctgagggagtgggtg
aacctctaccattcagccgcagcgggccgtgacagtaccaaagcattctcggcgtttgtt
ggacagatgcaccagcaaggaatcctgaaaacagacgacctgatcacccgctttttccgc
ctgtgcaccgaaatgtgtgttgagatcagctaccgtgcgcaggctgagcagcagcacaac
cctgctgccaaccccacgatgatccgggccaagtgctaccacaatctggatgcctttgtg
cgactcattgcactgctagtgaagcactctggggaggcaaccaacacggtcacaaagatc
aacctcctgaacaaggttcttggtattgtggtgggagttcttctgcaagaccacgatgtt
cggcagagtgagttccagcagctcccttaccatcgcatcttcatcatgttgctgttggaa
ttaaatgcccccgagcatgtgctggagaccatcaacttccagacactcacagctttctgt
aacacatttcacatcctgaggcctaccaaagctccaggttttgtttatgcctggctggaa
ctgatctcccatcggatatttattgcaagaatgctggcacatacaccacagcagaagggt
tggcctatgtacgcccagctattgattgatctgttcaagtacttggctcctttccttaga
aacgtggaactcaccaaacctatgcaaattctttacaagggcactctgcgtgtgttgctg
gtcttgttgcatgatttcccagaatttctttgtgactaccactacgggttctgtgatgtg
atcccacctaactgtattcagctacggaatctgatcctgagtgccttcccacggaacatg
aggcttccagaccctttcacccccaacctaaaggtggacatgctaagtgagatcaatatt
gctccacggatactcaccaatttcacaggagtgatgccacctcagttcaagaaagacttg
gattcctatctcaaaacccggtctccagtcaccttcctgtctgacttgcgcagcaaccta
caagtatcaaatgaacctggcaaccgctacaacatccagttgatcaatgccctggtgctc
tacgtggggactcaagctattgcacacattcacaacaaaggcagcacaccttccatgagc
accatcacccactcggcccacatggacatcttccagaatttggcagtagatctggacact
gaaggccggtacctcttcctgaacgcgattgccaaccagctgcggtaccccaacagccac
acccactacttcagctgcaccatgctctacctgttcgcagaggccaacaccgaggccatc
caggagcagatcaccagggttctcttggaacgactgattgtaaataggcctcatccctgg
ggtctcctcattaccttcatcgagctgataaaaaatccagcctttaagttctggaaccac
gaatttgttcactgcgccccagaaattgagaagttgttccagtctgttgcacagtgctgc
atggggcagaagcaggcccagcaggtcatggaagggactggtgccagttag
DBGET
integrated database retrieval system
