Mustela nigripes (black-footed ferret): 132008067
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Entry
132008067 CDS
T09425
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132008067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132008067
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
132008067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_17
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
ARM_TT21_2nd
TPR_6
TPR_15
SNAP
BTAD
PknG_TPR
TPR_5
TPR_20
DUF7017
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
132008067
NCBI-ProteinID:
XP_059242442
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MILEESARFDILAATSLAARLPKERGSLTDEGQQYCCRLMEMDSRSGPGFIGLGIKALQD
KKYEDAVSNLTEGLKESPLCTAGWYHLAEVQVKMHRPKEAVLSCNQALKNIDNLGVSGGS
LHQKNLCLRLKAEALIKLSDYESSVEAICTLDQVSDANNVPGLLVLKSLAYLNKGSLDEA
SKIMEDLLSSYPDLAEVHALEALIHFTKKDYPQAEKCFQRALEKDAEVAEYHYQLGLTYW
FMNEETRKDKTKTLTHFLKAARLDPYMGRVFRYLGHYYRDVVGDKNRARGCYRKAFELDD
TDAESGAAAVDLSVELEEMETALAILTAVTQRASAGTAKWAWLRRGLYYLKAGQHSQAVA
DLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQIL
GKYKEAVAQYQLIIKKKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTW
ALQHQADVSCLWKLVGDACTSLYAVSPSKVNVTVLGVLLGQKEGKQVLKKNELLHLGGRC
YGRALKLMSTSNTWCDLGINYYRQAQHLAETGSNTNDPKELLEKSLHCLKKAVRLDSKNH
LYWNALGVVSCHNGIRNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANENIEQAHEAFK
MAQSLDPSYLMCWIGQALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQNKS
NRDTELYRYNIVQMNAIPAAQVVLSKYIERVQNYAPAFTMLGYLNEHLQLKKEATEAYQR
AMLLLQTAEDQDTYNVTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKG
LYKESSKAYERALSVVESERDKAHILTALAITEYKQGKMDVAKTLLFKCSILKEPTTESL
QALCALGLTMQDATLSKAALNELLKHIKEKDSDYPKCLLISAIYALQGRSVAVQRQASKA
VHSNPADPALWSLLSRVVAQYTNRSAKGGAIAGNVAHILDSNHGKKALLYTAVNQLAMGS
SSAETEKNIALKTIQKAAFLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLALLS
AVSASIKDKEFLKDYNQSLEKWCLSQAVTGLMDTGRTSEAETLCTKNLKSNPDQPAVILL
LRQVQCKLLLESQNPLPDAVLEELQKTVMSNSTSVPAWQVLAIMSNVMSVLTYVFQ
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgattctggaagaatccgcccgatttgacatcctggctgctacgtctctagcagcacgg
ttgcccaaggagagaggcagtcttactgatgaaggacagcagtactgttgcagattaatg
gaaatggattccagaagtggtccaggcttcattggtttaggcattaaagcattacaagac
aaaaagtatgaagatgctgttagtaacctaacagaagggttaaaggaaagccctctttgc
acggctggatggtatcatctggcagaagtccaagttaaaatgcatagacctaaggaagct
gttctttcatgcaatcaagctctgaagaacatagataatcttggtgtgtccggtggcagt
cttcatcagaagaatctttgtctccgtttgaaagcagaggctttgattaaactctcagat
tatgaatcttcagtggaagcaatttgtactcttgatcaggtttctgatgcaaataatgtc
ccaggacttttggttcttaaaagcttggcctatctgaacaaaggttcattagatgaagct
tctaagattatggaagaccttctctcttcttaccctgacctagctgaagttcatgccctg
gaagctttgattcattttaccaaaaaggactatccacaagcagagaaatgttttcagagg
gctcttgagaaagatgctgaagttgctgaatatcattaccaacttgggttaacatattgg
ttcatgaatgaagaaacaagaaaagataaaacaaagactcttacccactttctaaaggct
gccagactggatccatacatgggcagagttttccgctatttaggtcattactacagagat
gtggtaggagataaaaacagagcccgtggctgttataggaaagcttttgaattagatgat
actgatgctgaatctggggctgcggcagttgacttaagtgtggagcttgaagagatggaa
actgccttagctatcctaacagcagtaactcaaagggcaagtgctggaacagcaaaatgg
gcctggcttaggcgaggactatactatttgaaagctggtcagcattctcaggctgtggct
gatttacaggcagcattaagggcagacccaaaggacttcaattgttgggagtcattagga
gaggcatacttaagcagaggtggctatacgacagccttgaaatccttcacaaaagccagt
gagctgaacccagaatccacatacagtgtgtttaaggttgcagcaatacagcaaatccta
ggcaaatataaggaggcggtagctcaataccagctgatcattaaaaagaaagaagattat
gtgccagctttgaaaggtttgggcgaatgccatctcatgatggcaaaagcagctctcgtc
gattatcttgatgggaaagctgtagactacatcgaaaaagcactggaatattttacttgg
gctctgcaacatcaagctgatgtctcttgcctttggaagctagttggagatgcttgtacg
agtctgtatgctgtctcaccatctaaagtgaatgttactgttttaggagtccttttaggt
cagaaagaaggcaaacaagtattaaagaagaatgagctcctccatcttggtggaaggtgt
tatggtcgtgcgttaaaactgatgtctacatctaatacatggtgtgaccttggaattaat
tattatcgccaagcacagcatctagcagaaacaggcagcaatacaaatgatcctaaagag
ttgttggagaagtctttacattgtctgaaaaaggcagtgagacttgacagtaaaaatcac
ttatattggaatgctcttggagtggtttcatgtcacaatggtattagaaattacgccctt
gctcaacactgtttcatcaagtctatccagtcggaacaaattaatgctgttgcatggacc
aacttgggagtgttataccttgcaaatgaaaacattgagcaagctcatgaagctttcaaa
atggctcaatctcttgatccatcttatttaatgtgctggattggacaagctcttattgca
gagacagttggaagttatgacactatggatcttttcaggcacactacagaactcagtatg
catactgagggagcaataggttatgcgtactgggtctgtacgacactgcaaaacaaaagc
aacagagatacagagctgtaccggtacaacattgttcagatgaatgctattccagcagca
caagttgttttgagtaaatacatagaaagagttcagaattatgctccagctttcacaatg
ttgggttacttaaatgaacatctacaactgaaaaaggaagccacagaggcataccagagg
gcaatgttattgttacagactgcggaagaccaagatacttacaatgttacagtaagaaat
tatggaagattgttatgttccattggtgaatatgataaagctatccaggcttttaaatca
acaccccttgaagagttagaagacatcataggttttgcattggctttatttatgaaaggt
ctatataaagaaagcagcaaagcctatgagagagccttgtctgttgttgaatcagagcgg
gacaaagcccatatcttgacagctctggcaatcacggagtataaacaaggaaaaatggac
gtagccaagacattgctatttaaatgctccatcttaaaggaaccaaccacagaaagcctt
caagccctttgtgctcttggattgacaatgcaggatgctacactttcaaaagcggcactt
aatgaattgctgaagcacatcaaagagaaagacagtgattatccaaagtgccttctcatt
tcagcgatttatgcactgcaaggccgcagtgtggcagtgcagagacaagcgtctaaagct
gttcacagtaaccccgctgatccagctctttggtctctgttgtcccgagtagttgctcag
tatactaaccgaagtgcaaagggaggtgctatagcaggaaatgtggctcatattttggac
tcaaatcatggaaagaaggcattactgtacactgcagtaaatcaattagctatgggaagc
agttcagcagaaactgaaaaaaatattgcactaaagaccattcagaaagcagcttttctt
tctccaggggatcctgctgtctgggctgggctgatggcagcctgtcatgctgatgataaa
ctggctttagtgaacaatactcagccaaagagaatggatctgtacttggcgctgttatct
gctgtttccgcttcaattaaagacaaagaattccttaaggattataaccaatctctggaa
aagtggtgtctctcccaggctgtcactggtctaatggacacaggaagaacatctgaagct
gaaaccctctgcacgaagaatttaaaaagtaaccctgatcagccagctgttatcttactt
ttgagacaagttcagtgtaaactactcctggagtcacaaaaccctctcccagatgccgtc
cttgaagagttgcaaaaaacagtcatgtccaactcaacttctgttccagcatggcaggtt
ttggctatcatgagtaatgttatgtccgtccttacctatgtctttcagtga
DBGET
integrated database retrieval system
