Mustela nigripes (black-footed ferret): 132010492
Help
Entry
132010492 CDS
T09425
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04151
PI3K-Akt signaling pathway
mnp04510
Focal adhesion
mnp04512
ECM-receptor interaction
mnp04518
Integrin signaling
mnp04820
Cytoskeleton in muscle cells
mnp04974
Protein digestion and absorption
mnp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132010492
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132010492
04518 Integrin signaling
132010492
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132010492
09142 Cell motility
04820 Cytoskeleton in muscle cells
132010492
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132010492
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132010492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnp04147
]
132010492
00536 Glycosaminoglycan binding proteins [BR:
mnp00536
]
132010492
Exosome [BR:
mnp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132010492
Glycosaminoglycan binding proteins [BR:
mnp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132010492
Hyaluronan
Extracellular matrix or blood plasma proteins
132010492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
DJ-1_PfpI
SRPRB
Motif
Other DBs
NCBI-GeneID:
132010492
NCBI-ProteinID:
XP_059244310
LinkDB
All DBs
Position
2:87328391..87419339
Genome browser
AA seq
2276 aa
AA seq
DB search
METWKAFWEFIFLAASFGFIKSQRIVCREASVGDVVFLVDANINPQHTRSMRDFLYIMVN
SFNVSKESIRVGLAQYGDQLHSEFLLSSYPRKSDVLKQIQSFQFRPGGHRLGLALQVLLD
EHFQTTAGSRATQDVPQVAMVISSSPAEDRVREAAEALKRAGVHIFTVGVKDAVLAELKE
IASSPEEKFSSFVPKFSDLGSHAQKLRQQLCNTLAKAVPPADDSFPACREAALADIVFLV
DSSTSIGPQNFQKVKNFLYSVVLGLDITSDQVRVGLAQYNDNIYPAFQLNQYPLKSVVLE
QIQNLSYCTGDTNTGSALEFIRICYLTEAAGSRAKDRVPXIVILVTDGESNDEVQEAANK
LKEDGVVVYVVGVNVQDIQELEKKASEPFEKYLFNIENFNTLQDFSGSILQTLCSTVEGK
IKEFSQVYADVVFLADTSQGTSWATFQWMQNFISRVVDLLDVGRNKYQIGLAQYGGQGHT
EFLLNTYQTRDEMTAHIRDHFLPRGGSRRTGKALRYLHQTFFQEAAGSRFLQGVPQYAVV
MTSGRSEDEFWDAAQKLREKGVKVMSVGVQDFDRRELEGMATPPLVYEMEGQDGVRQLMQ
DVGVVIQGTRQPGFGIASEKEPVVACPTTISTDLVFLIEEFSWDRQSNFQQIVNFLKTTV
SSLNVHPDGVRIGLVFYSEKPRLEFSLDAFQNPAQILEYLDKLTYRRRSGRTQTGAALEF
LRNQVFIEEKGGRSKHGVQQMAVVITEGFSQDELSKPASLLRKAGVIIYGVGTHLASESK
DLETIASYPPWKHIILLESFLQLSVVGNKIKNQLCPETVDRSVSLSGMGQDPQEDCVHME
RADIYFLVDGSSSINHDNFLEMKMFMKEAIKRFQIGPDRVRFGVVQYSDEIDIHFILNQY
SSVSGLKAAIDDIQQKKGGTMTGEALSSMAQVFANTTRSNVPWYLIIITNGKSEDPVAEP
AEALRRDGVTIYAIGVKNANVMELKEIAKDKMIFTPEFDSLKAIQKDVVQDICSSETCKN
RQADIIFLIDGSESISPENFEKMKGFVKRMVNQADISVDEIQIGLLQFSSAPREEFRLDR
YSSKVDIHRAISNVQQMNDGTRTGKALNFTLPFFDSSKGGRPNVQQYLIVITDGVAQDDV
VMPAKALRDRNIIIFAIGVGEAKSAQLLQITDDPQKVYYEENFESLQNLEKEILLKVCLP
QGCNIDLSIGIDISTPTRQVQQKLQGLLPELMQQLALLFNISCSDAGGLDLMFRYLVPGS
NGQLIFDSGFKKYSNDIIQTFLIHQTSTSNRMDADFLQSLGDHAIHPSSAKVKILLVFTD
GLDDSFQKLKITSELLRSKGLSGLLFIGLEGVHKLEELQELEFGRGFLYNQPLSITLQSL
PSILLKQLDSIVERRCCNICIKCYGEDGYQGDSGNPGNKGRPGADGLPGHPGEEGGHGER
GPQGLPGPRGEEGCPGVRGPKGARGFSGEKGSPGDEGVDGFVGEQGNRGAPGSSGEKGNR
GNRGVRGEPGEQGYQGELGYPGSQGLRGRQGIPGNSGQRGLPGAEGIPGPPGPIGSKGKA
GPTGRKGEVGDVGATGPRGPQGLRGQPGLLGPDGYGHPGRKGKKGEPGFPGSPGAQGEDG
DSGHRGEKGAKGIRGRRGNAGFPGLIGTPGDQGPPGPVGIKGPKGLADMMPCDIIAVIQE
NCPCSTGISKCPAFPSEVVFALDMSNDVSQSDFERMRNILLSLLEKMEISDSNCPMGARV
AIVSYNAKTDYLVRFSDHKGKPTLLQAVRAIPLQGSSGSRNLGEAMRFVARHVFKRVRSG
LLVRKVAVFFQAGWSHDQDAFSTATLELSALDITSAIITFTEAHNLPYDLLMDGTNRFQL
FVWETERHQDVEHMAHCTLCYDKCRPDPECEQSVPGPLTADMDMAFVVDSSYGVGADVYR
TALSLVDAVLNDLEVAAQPSMSPRGARAALVMHTTPDFWPGAGNPPVLEGFHLTSYGQKI
RMRKYIREASRRTLQGPPALGHALEWTLEKVLLAAPLPRPVRVLFAIVASETSSWDQEKL
RTLSLKAKCKGITLFVLALGPGVSTQELAELEGVASLPTEQHLLRLEGISDQEVAYAQGF
MRAFLNILKNGINQYPSPELIGKCGGPNRGDTLLKPFRSIRRLPKPQFGRSGFADDLEPL
EGTDVLLKENRKATMKSVTWQVALDSHEKNGYGAERNGQERSTRQKQTGKEGNSGTTYDP
CSMDPMAGECQDYTLKWYYDKEKQSCQQFWYGSCGGNANRFETQGECEVRCVPTLP
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggagacttggaaggcattttgggagttcatctttcttgcagctagttttggcttcatc
aagtcacagagaattgtctgcagggaggcgtccgtgggagatgtcgtgtttctagtggac
gccaacatcaacccccaacatacccgcagcatgcgggacttcttgtacatcatggtaaac
agcttcaatgtcagcaaagagtccatccgcgtggggctggctcaatacggcgaccagctc
cactccgaattcctactttcctcttacccccgcaaaagcgatgtgttgaaacaaattcag
agctttcaatttaggcctgggggccacaggttgggcctggccctgcaggtccttctagat
gagcacttccagacaacagcagggagtcgggcaacccaggatgtgcctcaggtggccatg
gtgatcagcagcagccccgctgaggaccgtgtgcgggaagccgccgaggccctgaagagg
gccggcgtccatatttttaccgttggtgtcaaagatgcagttttggcggagctcaaggag
attgcgagcagtccggaggagaagttctcttcttttgttcccaaattctctgatctgggc
agtcacgctcagaagctgcggcaacagctgtgcaatactttggcaaaggcagttccacct
gctgatgacagctttccagcttgcagagaggcagccctagcagacattgtcttcctagta
gacagctcaaccagcattggaccccagaacttccagaaagtgaagaacttcctttattct
gtggttttggggcttgacatcaccagtgaccaggtccgagtgggacttgctcagtataat
gacaacatatacccagcctttcagctgaaccagtaccctctgaagagtgtggtcctggag
cagatccagaatctttcctactgtacaggagacacaaacacaggaagtgccctggagttt
atcaggatatgctatttgacggaggcagctggcagccgggccaaggacagggttccttag
atagttatcctggtgacagatggggagtcaaatgatgaagtccaggaggcagccaacaaa
ttaaaagaagatggagtggttgtgtatgtggtaggggtcaatgttcaggatatccaggaa
ttggaaaaaaaagctagtgagccatttgagaagtatctcttcaacattgaaaactttaac
acccttcaggatttctcaggaagcattcttcagactctgtgctccacagtggagggtaag
ataaaagaattctcccaggtatatgcagatgtggtctttcttgccgacacctcacagggc
acatcatgggccactttccagtggatgcagaatttcatctccagagtggttgacctcctg
gatgttggcaggaacaagtaccagattgggctggctcagtatggtggtcaaggtcatact
gaatttttgctcaatacctaccagacccgggatgagatgactgctcacatccgtgaccac
tttttaccccgaggtggctccagaaggacaggcaaagccctgcgataccttcatcagacc
ttcttccaggaggcagcgggaagccggtttctccagggtgttccccagtatgcagtggtc
atgacctcaggcagatctgaggatgagttctgggatgctgcacagaaattgagggagaaa
ggcgtgaaagtcatgtctgtgggtgtccaggacttcgacaggagagaactggaggggatg
gcaaccccaccccttgtatatgagatggaaggacaagatggagtcagacagttgatgcag
gatgtgggtgtggtgatccaagggaccaggcagcctgggtttgggattgcatctgagaag
gagcctgtagtagcatgtccgacaactatctccactgatttggtctttctcattgaggaa
ttcagttgggacaggcaatcaaatttccaacaaatcgtcaacttcttaaagaccactgtc
agctctctaaacgttcatccagatggtgtgagaattggcttggtcttttacagtgagaaa
ccacgacttgagttttccttagatgcatttcagaacccagcccaaatcttggagtatttg
gacaaattaacctaccggagaagaagtggaaggacccagactggagctgctttggagttc
ctaaggaatcaggttttcattgaggaaaagggcgggcggtccaagcacggtgtgcagcag
atggcggtggtcatcacagaaggcttctcccaagatgagttgtccaagccagcttcactc
ctccgtaaggcaggggttatcatctatggggtgggcacccaccttgcctcagagagtaag
gacctggagactatagcgtcatatcctccttggaagcatatcatcttgctggaatctttt
ctgcaactctctgttgtgggaaacaagattaagaaccagctctgccctgagactgtggac
agaagcgtttccctttctgggatgggccaggatccacaagaagactgtgtacacatggag
agggccgatatttacttcctcgtcgatggctctagcagcatcaaccatgacaattttctt
gaaatgaaaatgttcatgaaggaagccataaagaggttccaaattgggcctgacagagta
cggtttggagttgttcagtactcggatgaaattgatattcatttcatcctcaaccagtat
tccagtgtgtcagggctgaaggcagccattgatgacatccagcagaagaaagggggcacc
atgactggtgaggccttgagcagcatggctcaggtctttgcgaataccactcgcagcaat
gtgccttggtacctcatcatcatcacaaacggtaaatctgaggacccagtggctgagcct
gcagaggcattgaggagagatggagtcaccatttatgctattggagtaaaaaatgctaat
gttatggagctcaaggagatagctaaagacaagatgattttcacgcctgagtttgattcc
ttgaaggccatccaaaaagatgtggtacaagacatctgctcctcagagacctgtaagaat
aggcaagctgatattatcttcctgatagatggttcggaatccatctccccggaaaacttt
gaaaagatgaagggattcgtgaagaggatggtgaaccaagctgatattagtgttgatgaa
attcagattggccttttgcagttcagctcagccccccgagaagaatttaggcttgaccga
tactcctcaaaggtggacatccacagagccatctcaaatgttcagcagatgaatgatggc
acccgcactgggaaagccctgaatttcactctgcctttttttgacagttcaaaaggaggg
agacccaatgttcaacagtatttgattgtgatcactgatggggttgcccaggatgatgta
gtcatgccagccaaggctctcagggacaggaacatcattatttttgctattggggtggga
gaagccaaaagtgctcagcttttgcaaattactgatgacccacagaaagtatactatgaa
gagaattttgagtccctgcagaacttggagaaggaaattcttcttaaggtctgccttcca
caaggatgcaacatagatttgtccataggaattgatatttccactcccacaaggcaagtt
cagcagaagcttcaagggttactgccagagttgatgcaacagttggccttgcttttcaac
atcagctgtagtgatgctggtggccttgacttgatgttccgctacttggtccctggctca
aatggccagcttatctttgactcaggctttaaaaagtatagtaatgatattattcagaca
ttcttaattcatcagacttccacaagcaacagaatggatgcggattttttgcagtccctt
ggagatcatgctatccatccctcttctgctaaagtgaagatccttttagtgtttacagat
ggactggatgatagtttccagaaactgaagataacatctgagcttctccgcagcaaagga
ctctctgggctcctcttcattggcctggaaggtgtgcataaattagaagagctccaggag
ctagaatttggcagaggattcctatataaccaacccctgagcatcacactgcaatccctc
ccaagcatcttactgaagcaacttgactcaattgtggaaagaagatgctgcaacatatgt
ataaagtgttatggagaagatgggtaccagggcgatagtgggaaccccgggaacaaggga
aggccaggtgctgatggattacctggtcatcctggtgaagaaggtggacatggagaaaga
ggcccccaaggccttcctggaccccgaggtgaggaaggttgcccaggtgtgagaggacct
aagggagcaagaggattttcaggagagaagggaagccctggtgatgaaggtgttgacggc
tttgttggagaacagggtaatcgtggagccccagggtcatctggagaaaaaggaaatagg
ggaaatcggggtgtgcgtggagaacctggtgaacagggttaccaaggagagcttggatac
ccaggctcacagggactgagaggaagacaaggaataccaggaaattctggacaaagagga
ttacccggtgctgaggggattcctgggcctcccgggccaattggttccaaaggaaaagct
ggaccaacaggaaggaagggggaagttggtgatgtaggagccacaggcccccggggtcca
caaggactaagaggacaacctggtcttttaggtccagatggatatggacatccaggaaga
aaagggaaaaagggtgaacctggatttcctggctctcctggtgcacaaggggaagatggt
gactcaggccaccgaggagagaagggagcaaagggaatcagagggcggaggggtaatgct
ggctttcctggacttattggaactccaggtgaccaaggccctccaggaccagtgggcatc
aagggtcccaaaggtttggcagatatgatgccttgtgacatcattgctgtcatacaagag
aactgcccttgttcgacaggtatttccaaatgcccagcgttccctagcgaagtggtcttt
gccttggacatgtcaaacgacgtctcccagtcggattttgagaggatgagaaacattcta
ttgtctctgttggagaagatggaaataagtgacagtaactgcccaatgggtgcccgagtg
gccatcgtttcgtacaatgccaaaactgactacctggttcgcttctcagaccacaagggg
aagcccacactcctgcaggcggtcagggcgatccctctgcaagggtcttctggcagcagg
aaccttggggaggccatgaggtttgtggccagacatgtattcaaacgtgtgcgctccggt
cttctcgtgaggaaagtggctgtgttctttcaggcaggctggtctcatgaccaagatgct
ttcagcaccgccactctggagctcagcgcactggacatcacctctgcgatcatcaccttc
acagaggcgcacaacctcccgtatgacctgctgatggatggaaccaacagatttcagctg
ttcgtctgggagaccgagaggcaccaggacgtggagcacatggcccactgtactctctgc
tatgacaagtgcagaccagacccagagtgtgaacagagcgtgccaggacccctcacagcg
gacatggacatggcattcgtggtagacagctcctatggcgttggtgctgatgtgtaccgc
actgccctgagtctagtggatgctgtgctcaatgacctggaggtggcggcacagcccagc
atgtccccccgtggggcacgtgctgccctggtgatgcacacgactccagacttctggcca
ggtgcagggaacccccctgtgctggagggcttccacttaacctcctacggccaaaagata
cggatgcggaagtacatccgggaggcttcccggcgcactctgcagggacctcctgccctg
ggacatgccctggagtggacgctggagaaggtgctcctggcagcccctctgcccaggccg
gtgcgggtcctcttcgccatcgtggccagcgagaccagcagctgggaccaggaaaagcta
agaactctgtccctgaaggccaagtgcaagggcatcactctgtttgtgctggctttgggc
ccgggcgtgagtacccaagagctggccgagctggagggtgtggccagcctccccactgag
cagcacctgctgcgtctggagggaatctcagaccaggaagtagcttatgcccaaggattc
atgagggccttcctgaacattctaaaaaatgggataaaccaatacccatcccctgagctc
attggaaaatgtggaggcccgaaccgaggggacactctgctgaaaccatttagatctatc
aggaggttgcccaagccccagtttggcagatctggctttgcagatgatctggaaccactt
gaagggacagatgttttgttaaaggagaatagaaaagccacaatgaaatctgtaacttgg
caagtagcacttgatagtcatgaaaagaatggatatggtgctgaaagaaatggacaagaa
agatctacaagacaaaagcaaaccggaaaagaaggaaattcaggcactacctatgatcct
tgttccatggacccaatggcaggggagtgccaggattacaccctgaaatggtactacgac
aaggagaagcagtcctgccaacagttctggtacggcagctgcgggggcaacgctaaccgg
ttcgaaacccagggagagtgtgaggtgcggtgtgtcccaacactcccctag
DBGET
integrated database retrieval system
