Mustela nigripes (black-footed ferret): 132011083
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Entry
132011083 CDS
T09425
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132011083 (DDX39A)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132011083 (DDX39A)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132011083 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132011083
NCBI-ProteinID:
XP_059245215
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Position
2:complement(10022881..10031083)
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AA seq
427 aa
AA seq
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MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVSGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEILKKNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaggatgtggaaaatgagcttctggattatgaggaagatgaagagccccag
gctcctccggagagcactcctgctccccccaagaaagacgtcaagggttcctatgtttcc
atccacagctctggcttccgggactttctgctgaagccagagctcctgagggccatagtg
gactgtggcttcgagcatccatccgaggtccagcacgagtgtattccgcaagccatcctg
ggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcggtcttcgtgttg
gccaccctgcagcagattgagccagtcagcggacaggtttcagtcctggtcatgtgccac
acgcgggagctcgccttccagatcagcaaagagtatgaacgcttctccaagtacatgccc
agtgtcaaggtgtctgtgttcttcgggggcctttccatcaagaaggatgaagaaatactg
aagaagaactgtccccatgtcgtagtggggacaccaggccgaatcctggcactagtgcgg
aacaggagcctgaacctgaagaacgtgaaacacttcgtgctggacgagtgtgacaagatg
ctggagcaactggacatgcggcgggacgtgcaggagatcttccggctgacgcctcacgag
aagcagtgcatgatgttcagcgccaccctgagcaaggagatcaggcctgtctgcaggaag
ttcatgcaagaccccatggaggtgtttgtggatgatgagaccaagctcacgctacacgga
ctgcagcagtactatgtcaagctcaaggacagtgagaagaaccgcaagctctttgatctc
ttggatgtgttggagtttaaccaggtggtgatcttcgtgaagtcagtgcagcgctgcatg
gccctggcccagctccttgtggaacagaacttcccggccatcgctatccacaggggcatg
gcccaggaggagcgtctgtcgcgctatcagcagttcaaagacttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatcgtcttcaac
tacgacatgcccgaggactcagacacctacctccaccgagtggcccgtgcaggtcgcttt
gggaccaaaggtctggctatcacttttgtatctgatgagaatgatgccaaaatcctcaat
gacgttcaggacaggtttgaggtgaacgtggccgaacttcctgaagaaatcgacatctcc
acatatattgagcagagccggtaa
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