Massilia sp. NR 4-1: ACZ75_17210
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Entry
ACZ75_17210 CDS
T04026
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mnr
Massilia sp. NR 4-1
Pathway
mnr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACZ75_17210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnr03021
]
ACZ75_17210
03400 DNA repair and recombination proteins [BR:
mnr03400
]
ACZ75_17210
Enzymes [BR:
mnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACZ75_17210
Transcription machinery [BR:
mnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACZ75_17210
DNA repair and recombination proteins [BR:
mnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACZ75_17210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
ApbA_C
PYNP_C
Motif
Other DBs
NCBI-ProteinID:
AKU22937
UniProt:
A0A0K1K0P8
LinkDB
All DBs
Position
complement(4133683..4137909)
Genome browser
AA seq
1408 aa
AA seq
DB search
MKALLDLFKQVQQNETFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVTDPGMTPLKKCQIMSEDDYAAKYEEYGDDFTAFM
GAEGIRELLRSIDIHRDAEALRVELKESKSEAKIKKYAKRLKVLEAFQRSGIKPEWMIME
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPEIITRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKAAKKLVEIQEPVVWDILEEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSIEAQMEA
RTLMLASNNILFPSNGEPSIVPSQDIVLGLYYATREAINAKGEGMMFPDVSEVIRAYDNK
EVELATRITVRIVENPKDPVSGEFVRTLTRYETTVGRAILSEILPKGLPFSVLNRPLKKK
EISRLINTSFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPLVKKTLISTAES
EVKQIEQQYASGLVTAGERYNKVVDIWGKTSDEVGKAMMDQLKVEDVTRRDGTQTTQESF
NAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTSNGTLMKAMVEGGEVIEALRDRI
LGRVAGNDVVNPETQETLYEAGTLLDEDMVEEIERLGIDEVKVRTPLTCDTRYGLCAKCY
GRDLGRGLLVNSGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGTIR
FTATMRYVTNGKGAQIVISRSGEVLITDDHGRERERHKVPYGATLIVKDGMTVKAGAPLA
TWDPLTRPIITEYAGTVRFENVEEGVTVARQVDEVTGLATLVVIDAKRRGSLTKTVRPQV
KLLNDDGHEVKIAGTEHAVAIGFQVGALIMVKDGQQVSVGEVLARIPTESQKTRDITGGL
PRVAELFEARSPKDAGMLAEVTGTVAFGKETKGKQRLEITDMDGNKHEFLITKDKQVLVH
DGQVVNKGEMIVDGPADPQDILRLLGIEALARYIVDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVQITNAGDSDYIVGEQVERSELLEENDKLAAQNKLPATYENVLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKRDGLRGLKENVIVGRLIPGGTGLAFHRARREKEVWEAEE
RKALLDAERAAIVAELPAEEVPHHSDEA
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccctgctcgatctattcaagcaagtacagcaaaacgagacgtttgacgcgatc
aaaatcggtctcgcttcgcctgaaaaaatccgttcctggtcctacggcgaagtcaaaaag
ccggaaaccatcaactaccgtaccttcaagcctgagcgcgacggcctgttctgcgccaag
atctttggcccgatcaaggattacgagtgcctgtgcggcaagtacaagcgcctcaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagttaccctggccaaggtgcgccgcgag
cgcatgggccacatcgagctggcctcgccgaccgcccacatctggttcctgaaatcgctg
ccgtcgcgtctgggcatggtgctcgacatgaccctgcgcgatatcgaacgcgtgctgtat
ttcgaagcatacgtcgtgaccgatcccggcatgaccccgctgaaaaaatgccagatcatg
tcggaagacgattacgccgccaagtatgaagaatacggcgacgacttcaccgccttcatg
ggcgccgaaggcatccgcgaactgctgcgctcgatcgacatccaccgcgatgccgaagcg
ctgcgcgtggagctgaaggaatcgaagtcggaagcgaagatcaagaaatacgccaagcgc
ctgaaagtgctggaagcgttccagcgttccggcatcaagcctgagtggatgatcatggaa
gtgctgccggtgctgccgccggagctgcgtccgctggtgccgctggacggcggccgcttc
gcgacctccgatctgaacgatctgtaccgccgcgtcatcaaccgtaacaaccgtctgaaa
cgcctgatggagctgcgcgcgccagagatcatcacgcgcaacgaaaagcgcatgctgcag
gaagccgtcgactcgctgctcgacaacggccgccgcggcaaggccatgaccggcgccaac
aagcgtccgctcaaatcgctggctgaaatgatcaagggtaagggcggccgcttccgtcag
aacttgctgggtaagcgcgtcgactactcgggccgttcggtcatcgtggtgggtccgcag
ctgaaactgcaccagtgcggtctgccgaagctgatggcgctggaactgttcaagcccttc
atcttcaacaagctcgaactgatgggtctggcaacgaccatcaaggcggcgaagaaactc
gtcgagattcaagagccggtggtgtgggacatcctggaagaagtgatccgcgaacacccg
atcatgctgaaccgtgcgccgaccctgcaccgtctgggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcacccgctggtctgcgcggcgttcaacgccgac
ttcgacggcgaccagatggctgtccacgtgccgctgtcgatcgaagcgcagatggaagcg
cgtaccctgatgttggcctcgaacaacatcctgttcccatcgaacggcgaaccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaggcgatcaacgcc
aagggcgaaggcatgatgttcccggacgtgtccgaggtcatccgcgcctacgataacaag
gaagtggaactggcgacccgcatcaccgtgcgtatcgtcgagaacccgaaagatccagtc
tccggcgaattcgtgcgcaccctgacgcgctacgaaaccaccgtgggccgcgccatcctg
tccgaaattctgccgaagggtctgccgttctcggtgctgaaccgtccgctgaagaagaag
gaaatctcgcgtctgatcaacacctccttccgcaagtgcggtctgcgcgccaccgtggtg
ttcgccgaccagctgatgcagtcgggcttccgcctggcgacccgcgccggtatctcgatt
tgcgtcgacgatatgctggtgccgctggtgaagaagaccctgatctcgaccgccgaatcg
gaagtcaaacagatcgagcagcagtacgcctcgggtctggtgaccgccggcgagcgttac
aacaaggtcgtcgacatctggggcaagacctcggacgaagtgggcaaggccatgatggac
cagctcaaggtggaagacgtgacccgccgcgacggcacccagaccacccaggaatcgttc
aacgcgatttacatgatggccgactcgggcgcccgtggttcggccgcccagatccgccag
ctggccggtatgcgcggtctgatggccaagccggacggctcgatcattgaaacgccgatc
accgcgaacttccgcgaaggtctgaacgttctgcagtacttcatttcgacccacggcgcg
cgtaaaggtctggccgacaccgcgctgaaaaccgcgaactccggttacctgacccgccgt
ctggtggacgtgacccaggatctggtggtgatcgaggacgattgcggcacttccaacggc
acgctgatgaaggcgatggtcgaaggcggtgaagtgatcgaagccctgcgcgaccgtatt
ctgggccgcgtggcaggcaacgacgtggtcaatcctgaaacccaggaaaccctgtacgaa
gccggcaccctgctggacgaagacatggtcgaagagatcgagcgtctgggcatcgacgaa
gtcaaagtgcgcaccccgctgacctgcgacacccgctatggcctgtgcgccaagtgctac
ggccgcgacctgggccgcggcctgctggtcaactccggcgaagcggtcggtgtggtggca
gcgcagtcgatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggt
gcggcatcgcgtgcagcagtggcatcgagcgtggaagccaagtcgaacggcaccatccgc
ttcaccgcgaccatgcgttacgtcaccaacggcaagggcgcgcagatcgtcatttcccgt
tccggcgaagtgctgatcaccgacgaccatggccgtgagcgcgagcgccacaaagtgccg
tacggcgcgaccctgatcgtcaaggatggcatgaccgtgaaagccggcgccccgctggcg
acctgggatccgctgacccgtccgatcattaccgagtacgccggtacggtgcgcttcgag
aacgtcgaagaaggcgtgaccgtggcccgtcaggtggacgaggtgaccggtctggccacc
ctggtggtgatcgatgcgaaacgccgtggttcgctgaccaagaccgtgcgtccgcaggtg
aaactgctgaacgacgacggccacgaagtgaagatcgccggcaccgaacacgccgtggcg
atcggcttccaggtcggcgcgctgatcatggtgaaagacggccagcaagtgtccgtgggt
gaggttctggcgcgtatcccgaccgaatcgcagaaaacccgtgacattaccggtggtctg
ccacgcgtggccgagctgttcgaagcccgttccccgaaagacgccggcatgctggcggaa
gtcaccggtacggtggccttcggtaaggaaaccaagggcaagcagcgtctggaaatcacc
gacatggacggcaacaagcacgagttcctgatcaccaaggacaagcaagtgctggtgcac
gacggccaggtggtgaacaagggcgagatgatcgtggacggcccggccgatccgcaagac
atcctgcgcctgctgggcatcgaagcgctggcccgctacatcgtcgacgaagtgcaggac
gtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaagtgatcgtgcgccag
atgctgcgccgcgtgcagatcaccaatgccggcgacagcgactacatcgttggcgagcag
gtggaacgttcggagctgctggaagagaacgacaagctggcagcgcagaacaaactgccg
gccacctacgaaaacgtgctgctgggtattaccaaggcatcgctgtcgaccgactccttc
atctcggccgcatcgttccaggaaaccacccgcgtgctgaccgaagcggcgatcatgggc
aagcgcgatggtctgcgcggcctgaaagaaaacgtgatcgtgggccgtctgatcccaggc
ggtaccggtctggccttccaccgcgcccgccgcgagaaggaagtctgggaagccgaagaa
cgcaaagcgctgctggatgcagagcgcgctgcgatcgtggccgaactgccagcggaagaa
gtgccgcaccacagcgacgaagcgtaa
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