Moraxella nasovis: LU293_06395
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Entry
LU293_06395 CDS
T08442
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mns
Moraxella nasovis
Pathway
mns03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mns00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LU293_06395 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mns03021
]
LU293_06395 (rpoB)
03400 DNA repair and recombination proteins [BR:
mns03400
]
LU293_06395 (rpoB)
Enzymes [BR:
mns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LU293_06395 (rpoB)
Transcription machinery [BR:
mns03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LU293_06395 (rpoB)
DNA repair and recombination proteins [BR:
mns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LU293_06395 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
UNU72738
LinkDB
All DBs
Position
1293818..1297909
Genome browser
AA seq
1363 aa
AA seq
DB search
MAYSYTEKKRIRKSFSKLPDVMDVPYLLAIQVDSYEQFLQEHKQPKARANVGLQAAFSSI
FPITSHSGHAELQFVEYQLGEPEFDERECIMRGSTFAAPLRVKIRLVVKDKDNKATIKDV
REQRVYMGEIPLMTDNGTFIINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKVLYNARII
PYRGSWLDFEFDVKDLVYARIDRRRKLLATIILRAIGMDDQEILDTFFDSIEVFKGADSF
EVELVPERLQGEMAQFDIVSPDGKVLVEQGKRINARRIKEIVASGMTKLAVPDEYLYEHI
LAEDILYHDEVIARANTLIDHELLVKLADKNIESFKILFTNDIDHGAYIADTLRADTVKT
REEALIEIYKVMRPGEPPTLDTAEKLFESMFFSQERYDLSNVGRMKFNRRLGREFVETDD
IDVQREQGVLSKQDIIDVVKELFEIRNGRGEVDDIDHLGNRRIRSVGEMTENQFRIGLAR
VERAVKERLTTAETDSVSPQDLINSKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRV
SALGPGGLTRERAGFEVRDVHNTHYGRVCPIETPEGPNIGLINSLAVFAKTNNFGFLETP
YRRVIDGKVTDDIEYMSAIEEVGAVIAQADSPMNDQGELTEEMVMVRYQGESVRMGVDKV
THMDVSPRQVVSVAASLIPFLEHDDANRALMGANMQRQAVPTLRSDKPLVGTGMERHVAR
DSGVCVVAKRGGVIEEVDASRIIVRVDESEVVAGEAGIDIYNLIKYTRSNQNTCINQRAI
VNAGDKIARGDILADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILLSERVVQEDRFTT
IHIQELTCVARDTKLGPEEITGDIPNVGEAALANLDEAGIVYIGAEVDAGDILVGKVTPK
GESQLTPEEKLLRAIFGEKAADVKDTSLRVPSSTKGTVIDVQVFTRDGLEKDSRAKAIEQ
AMLDDYRKDLREGLNIFEAAARDRIISLLVGKKVSGGAGFKAGTVLTAEQMQDIALDSLL
DIQPAEEEVSELLGQIADYLAEKRKEIDNKFADKKRKLTQGDDLAHGVQKIVKVYLAVKR
RIQPGDKMAGRHGNKGVVSRIMPVEDMPYDENGNPVDVVLNPLGVPSRMNIGQILETHLG
MAARGLGDKINTMLRAQAAVTELREFLDKIYNQVGGEQVDLDSLSDDDVITLANNLRQGV
PMGTAVFDGAKETQIKALLELAGLDKSGQQTLYDGRTGKQFDRPVTVGYMYMLKLNHLVD
DKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGATYTLQEMLTVKSDDVEG
RTRMYKNIVDGEQYMNPGMPESFNVLTKEIRSLGINIDLKEKK
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcttatactgaaaaaaaacgtattcgtaaaagtttttccaaattaccagac
gtcatggacgtgccatatttattggcaatccaagtagattcttacgagcagtttttacaa
gaacataaacaacctaaagctcgcgctaatgtcggtttgcaagcagcattctcgtctata
ttcccaatcaccagtcattctgggcatgctgaacttcaatttgttgagtatcagcttggt
gagcctgaatttgatgaacgtgaatgtattatgcgtggctcaacattcgctgcaccactt
cgtgtaaaaattcgtttagtggttaaagataaagataataaagcaactattaaggatgtg
cgtgagcaaagagtatatatgggtgaaatcccattaatgacagacaacggtacgtttatt
attaacggtactgagcgtgtcattgtatctcagctacatcgttcacctggtgtgttcttt
gaccatgacaaaggcaagtcgcattcaagtggtaaagtgctgtataacgctcgcattatc
ccatatcgtggttcatggcttgattttgagtttgacgtaaaagacttggtatatgcacgt
attgaccgtcgccgtaagttacttgcaaccattattttacgtgccatcggcatggatgac
caagagattttagatactttctttgatagtattgaagtgtttaaaggtgcagattctttt
gaagtagagcttgtgcctgagcgtttacaaggtgagatggctcaatttgacatcgtatcg
cctgatggtaaagtattggttgagcaaggcaagcgtattaatgctcgccgcattaaagaa
atcgtcgcatctggtatgacgaaacttgcagtgcctgatgagtatttatatgaacatatt
ctggcagaagatattttataccacgatgaagtgattgctcgtgccaatacgttaattgac
catgagcttttggtaaaactagcagataaaaacatcgaaagctttaaaattttgttcacc
aatgacattgatcatggtgcctacattgcagatactttgcgtgccgacaccgttaaaaca
cgtgaagaagctttgattgaaatttataaagtcatgcgtccaggtgagccgccaacgctt
gatacggcagaaaagctatttgagagcatgttctttagccaagagcgttatgatttatca
aatgtcggtcgtatgaagtttaatcgccgcttaggtcgtgagttcgttgagacagatgat
attgatgtacagcgtgagcagggtgttttatctaagcaagacatcatcgatgtggtaaaa
gagttgtttgagattcgtaacggtcgtggtgaagttgacgatattgaccatttgggtaac
cgtcgtatccgttcggtgggcgagatgaccgagaaccagttccgtattggtctagctcgt
gtagagcgtgcagtaaaagagcgtctaacgacagctgaaacagacagtgtatctccacaa
gatctgattaactcaaaacctgtggcagcagcaatcaaagaattctttggttcaagccag
ctttcacagtttatggatcagaacaatccactgtcagaaattacgcataaacgtcgtgtt
tctgcacttggccctggtggtttgactcgtgagcgtgcaggctttgaggtgcgagatgta
cataacacccactatggtcgcgtgtgtccgattgagacaccagaaggtccaaacattggt
ttgattaactcattggcagtatttgctaaaaccaataattttggcttcttagaaacgcca
tatcgccgcgtgattgatggcaaggtaactgacgatatcgaatatatgtcagccattgag
gaagtaggtgcggtaatcgctcaggcagattccccgatgaatgatcaaggtgagctgaca
gaagagatggtgatggtgcgttaccaaggcgaatcggtgcgtatgggtgtggataaagtc
acccatatggacgtatcaccacgtcaagttgtgtctgtggcagcaagcttaattccattt
ttggaacatgacgatgctaaccgtgctttgatgggtgcaaacatgcaacgacaagctgtg
ccgacgttacgcagtgataagccgcttgttggtacaggtatggaacgccacgttgctaga
gatagcggggtgtgtgtggtcgccaagcgtggtggtgttattgaagaagttgacgccagt
cgtatcatcgtgcgtgttgatgaaagtgaagtcgttgcaggtgaggcgggtattgatatt
tataaccttatcaaatatacacgttcaaaccaaaatacttgtattaaccaacgtgctatc
gtgaatgctggtgataaaattgctcgtggcgatatcttggcagacggcccatctactgac
ttgggtgaattggcacttggtcaaaatatgcgtgtggcgtttatgccgtggaatggttat
aactttgaagactctattttgctatctgaacgtgtggtgcaagaagaccgctttaccacc
attcacattcaagagctaacttgtgtggctcgtgataccaagcttggacctgaggaaatc
acaggcgatattccaaacgtcggtgaggctgcccttgctaacctggatgaagcaggtatc
gtttatatcggtgcagaagtagacgcaggggatattttggtgggtaaagttaccccaaaa
ggcgaaagccaattaactccagaagaaaagctgcttcgtgccatctttggtgaaaaagct
gctgatgtaaaagatacgtcacttcgtgtgccttcatctacaaagggtacagttattgac
gtgcaggtctttacccgtgatgggcttgaaaaagatagccgtgccaaagctatcgagcaa
gcaatgctagatgactaccgtaaagacttaagagagggtttaaatatctttgaagcggct
gcacgtgaccgtattatcagcttgctggttggtaagaaggtaagtggcggtgctggcttt
aaggcaggtactgtgctgacagcagaacagatgcaagatattgcacttgattcattgctt
gacattcagcctgcagaagaagaagtgtcagagctactaggtcagattgctgattacttg
gctgaaaagcgtaaagagattgacaacaagtttgctgataagaaacgcaagcttactcaa
ggcgatgacttggcacatggcgttcaaaaaatcgtcaaagtatatttggcggtgaaacgt
cgtatccagccaggtgataagatggcaggtcgccatggtaacaaaggtgtggtatcacgc
attatgccagttgaggatatgccttatgacgaaaatggcaacccagttgatgtggtgcta
aacccgctaggtgtaccatctcgtatgaatattggtcagattctagagacgcaccttggt
atggcagctcgagggctgggcgataagattaataccatgctccgtgcacaagcagcagtg
actgaattgcgtgaattcttggataagatttacaaccaagtaggcggtgagcaagttgat
ttagacagcttgagtgatgacgatgtaatcacacttgcaaataacttgcgtcaaggcgta
ccaatgggtacagctgtatttgacggtgccaaagaaacccaaatcaaagcattgcttgaa
ttggcagggcttgataaatcaggtcagcagacgttatatgatggacgcacaggtaagcag
ttcgatcgccctgttactgtcggctatatgtatatgcttaaattaaaccacctagttgat
gataagatgcacgctcgttcaacagggtcatacagccttgtcacccagcaaccacttggc
ggtaaagcacagtttggtggtcagcgttttggcgagatggaagtgtgggcattagaagct
tacggtgcaacttataccttgcaagaaatgctgacggtgaagtcggatgatgtggaaggt
cgtactcgtatgtataagaacatcgtggacggtgagcagtatatgaatcctggtatgcca
gaatcgtttaatgtactaaccaaagaaattcgctcgctgggtattaacatcgatttaaaa
gaaaaaaaataa
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