Morus notabilis: 21404621
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Entry
21404621 CDS
T07292
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21404621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21404621
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
21404621
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
21404621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
DUF6457
BRCC36_C
Motif
Other DBs
NCBI-GeneID:
21404621
NCBI-ProteinID:
XP_024032955
LinkDB
All DBs
Position
Unknown
AA seq
2404 aa
AA seq
DB search
MLKFSSTTANQIRLLLQSLTEANADSVLHDLSQFIEFGTEGSIFVLKACLDHLNRHETES
KNAPLEKVVASIFRYLLERPNFSTVFCESLRNSEISEGILDNFSNVLHLSVPEKICIGLA
LSDSENSDIRICGKNFCVAQIEELCANPVNLNSEQILSIVMFLQQSEGLAKLVDAFMQML
SLVQLKDVSTFVLTPLLSDEQRDAQFLRNMDLLHGSEENDFDAILAEMEKEMSMGDIMKE
LGYGCTVDASQCKEILSLFLPLTEVTISKILGTIACTHADLEDNQNTLSTFSMALGCNTS
SDLPLLNSWNIDVLIDTIQQLAPNTNWVKVIENLDHEGFYIPNQEAFSFFMSVYKRVCQE
PFPLHAICGSVWKNTEGQLSFLKYAVTSPPEVFSFTHSVRQLAYIDSLHGHKLQVGPANH
AWLCLDLLDVLCQLAERGHASTVRSMVQYPLQHCPEVLLLGMAHINTAYNLLQHEVSVTV
FPMILKNGLDSDMTLHLWHVNTYLVLRGFVEAHKSDLDVITKILDICQEKKILSSVLDLA
PSSFSIKLAALASRKELVDLEKWLVSNLSTYKDVFFEECLKFLKEIQFGGSHDFSARPFQ
HSGAISNLYADATTTFLKVLKAHVGLITSSQLSEELERLRVTIVDSNPRLQNGGTTESST
DGYAEDIEAEANSYFHQMFSAQLTIDAMVQMLARFKESSVKRENLIFECMIANLFEEYRF
FPKYPERQLKIAAILFGSVIKNQLVTHLTLGIALRAVLDALRKPADSKMFVFGTKALEQF
VDRMIEWPQYCNHILQISHLRNTHSELVAFIEQALARISSTHSESEGGNQASAAYHHGPT
QVTSGNVDLNGPGAIHSGQQLSSPVQLQERHESSYDDRHRASVTSSNDIKPLLSSVGQAS
GVSVGEASGTQKLQSAVTAPPMLSSSPGFVRPSRGVTSTRFGSALNIETLVAAAEKRETP
IEAPASEAQDKISFIINNISVANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHD
LYLKFLDKVNSRALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRN
QVLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEI
YSMPNLKMNLKFDIEVLFKNLGVDLKEITPTSLLKDRKREIEGNPDFSNKDVGASQSQMV
AEVKSGIMSPLNQVELPLEVAPSSNSGGHTHILSQYAAPLHLSSATLMEDEKLAALGLTD
QLPSAQGLLQATPSQSPFSVNQLPAAIPNIGTHVIINQKLNGLGLHLHFQRIVPMAMDRA
IKEIVSGIVQRSVSIATQTTKELVLKDYALELDETRIFNAAHLMVASLAGSLAHVTCKEP
LRTSILSHLRNLFQSLNLASDILEQAVQIITNDNLDLGCAVIEQAATDKAIQTIDGEITQ
QLSLRRKHREGVGPTFFDASMYTQGSMGVVPEALRPKPGHLSNNHRVYEDFVRLPLQNQS
SQIASASSANAGLAGAYASASAQLNPAYSPAPVNAGFEAVSRPLDEAIDSTSALHLSASS
MHSGVADGVTQHSSENDPPVGSFASAVPAPELHPVDSSDAVKEPGASLPLPSPAAAAAER
LGSSISEPSFSTRDALDKYQIVSQKLEALVINDGREAEIQGVVAEVPEIILRCVSRDEAA
LAVAQKVFKGLYENASNPVHVGAHLAILTAIRDVCKLAVKELTSWVIYSDEERKFNKDIT
VGLIHSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLAVEESKVISELHNLVDALA
KLASKPGYPESLQQLVEMIKNPTANVAAASGVNVGKEDKARQSRDKKTPGVSVSKEDLSN
VESLEPDPTGFREQVSMLFAEWYRICELPGANDAACTNYILQLHQNGLLKGDETTERFFR
LLTELSVAHCLSSEVINSGTLQAPLQVQSLSFLAIDIYAKIVFSILKGSTNRPFLLSKIL
AVTVKFIQKDAEEKKSSFNPRPYFRLFINWLMDLGSLEPLVDGSNFQILTIFANAFHALQ
PLKVPSFSFAWLELVSHRSFMPKMLTGNNQKGWPHIQRLLVDLFQFMEPFLRNAELGASV
HFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTP
NLKIDLLAEISQSPRILSEVDAALKAKQMKNDVDEYLKTRQQGSPFLSDLKQKLLLAPSE
VATAGTHYNVPLINSLVLYVGMQAIQQLQSRSAHAPSTPGAPLAVFLVGAALDIFQTLIM
DLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESHQEIIQEQITRVLLERLIVNR
PHPWGLLITFIELIKNPRYNFWNRGFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWAP
DNAH
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaattttcgtcaaccaccgcgaaccagattcgcttactccttcagagcctcacc
gaagcaaatgccgactccgttcttcacgacctctctcagtttattgaatttggaaccgag
ggaagcatttttgtgctcaaagcgtgcttggatcatctgaatcggcacgagacggagtcg
aagaatgcgccgttggagaaggtggtcgcgtcgattttcagatatctcctggaaagaccg
aatttcagtactgtgttttgcgagtctctgaggaattcagagatcagtgaaggaatccta
gataatttctctaatgtattgcatctgtcggtgcctgagaaaatttgtattggtctcgca
ttgtctgattctgaaaactctgatatcaggatatgtggcaagaacttttgcgttgctcag
attgaggaattgtgtgccaatcccgttaatctgaattctgagcaaattttaagtatcgtc
atgttcctccagcaatccgagggccttgcaaagcttgtagatgcatttatgcagatgtta
tctttggtgcagctgaaagatgtatcgacgtttgttttaactcctttgctttcagatgaa
caacgtgatgcccaatttttgaggaacatggatttgttacatggaagcgaagaaaatgat
tttgatgctattttggctgaaatggagaaggaaatgagcatgggagatattatgaaggaa
ctaggttatggttgtacggttgatgcatcccagtgcaaggagattttgtccctcttttta
ccactcactgaggttactatttctaagatattgggcacaattgcctgcactcatgctgac
cttgaggacaaccagaatacattatcaacattcagcatggcgcttggttgcaacacttcg
tctgatctgcctttgttgaatagttggaatattgatgtccttatagatacaatccagcaa
ctcgcgccaaatactaactgggtaaaggttattgaaaatttggatcacgagggattctac
attcctaatcaggaggcattctcgttcttcatgtctgtatataagcgtgtgtgccaggag
ccattcccgctccatgctatttgtgggtctgtttggaaaaatactgagggtcaactgtca
tttcttaaatatgctgtaacatcaccacctgaagtatttagcttcacccactccgttaga
cagctggcatatattgattcgctgcatgggcataagcttcaagttggacctgcaaatcat
gcatggttatgccttgacctcttggatgtattgtgtcaactagcggagaggggtcatgct
tctactgttcgatcaatggtccaatatccccttcaacactgtcctgaagtgctgctcctt
gggatggcgcatataaatactgcatataacctgctgcaacacgaagtgtctgttactgtt
ttccctatgatactaaagaatggcctggatagtgatatgactcttcatctctggcatgta
aatacctatttggtattgcggggatttgtcgaggctcacaagagtgatttagatgtcatt
acaaaaatactggatatctgccaagagaaaaagattctgtcatctgtgctagatctggct
ccatcttcctttagtatcaagttggcagcccttgcttcgagaaaggagcttgttgacctt
gagaaatggttggtcagtaatttgagtacttataaagatgttttctttgaggagtgcctc
aagttcttaaaggagattcagtttggtggatcacatgatttttctgccaggcctttccaa
cattctggtgccatctctaacctttatgcagatgctactactaccttcttgaaggtcctt
aaagctcatgtcggattgattacttctagccaactttctgaagaactagaaaggttgcgt
gtaacaatagtggactctaatccaaggctacagaatggtggaaccacagagtcatcaact
gatggatatgcagaggatatcgaagctgaagccaattcttatttccaccaaatgttttct
gcacagttgactattgatgcgatggtacaaatgctagcccgatttaaggaatcttctgta
aagagggagaatttaatttttgagtgcatgattgctaatctgtttgaggagtacagattc
ttccccaagtatcctgaaaggcaattgaaaattgctgcgattctttttggctctgttatc
aagaaccagcttgtaactcatcttacacttgggatcgctcttcgtgctgttctggatgca
ttgcgcaaacctgcagattcaaaaatgtttgtgtttgggactaaagccttggagcagttt
gtggatcgtatgatcgagtggccacagtactgcaatcatatcttacagatttcccatctg
cgcaatacccattcggagctagtcgctttcattgaacaggctcttgctaggatttcatcg
acccattcagaatctgaagggggcaaccaggcttctgccgcttatcaccatggccccact
caagttacctctgggaatgtggatttgaatggtcctggtgctatacattcggggcagcaa
ctctcttctcctgtgcaacttcaagagagacatgaaagctcttatgatgaccgtcataga
gcctctgtgacttcatcgaatgatatcaaaccacttttatcttctgttgggcaagcttca
ggtgtttctgttggtgaagcctctggcacccagaaattgcaaagtgcagtcactgctcca
ccaatgctttcttcttctcctggttttgttcgtccttcgcgaggagttacttccacaagg
tttgggtctgctctgaatattgaaacattagttgctgctgctgaaaagagagagactcct
attgaggctccggcatccgaggcgcaggacaagatatcattcataatcaacaacatttcg
gttgctaatattgaagctaaagctaaggaatttactgaaatactgaaggaacaatactat
ccatggtttgcacaatatatggttatgaaaagagcaagtatcgagccgaattttcatgat
ttgtacttgaagttcctggacaaagttaattcaagggctttgaataaggagattgtccaa
gccacctacgagaactgcaaggttctcttgggatcagagcttataaaatcaagttctgaa
gaacgttcattattgaagaatttgggtagctggctagggaagttaacaattggaaggaat
caagtcttacgggctcgtgaaatagatcccaaatctttgattgtagaggcatatgagaag
gggctgatgattgctgtaataccatttacgtcaaaggtcttagagccatgccaaagcagt
ttagcatatcaaccacccaatccctggacaatgggcattcttggattacttgctgagatt
tattcaatgccaaacttgaaaatgaacctgaaatttgacattgaggttctattcaagaac
cttggtgtcgatctgaaggagataacgccgacttctcttcttaaggatcgcaagagagaa
atagaaggcaaccctgatttttcgaataaagatgttggagcatcccaatcccagatggtt
gctgaagtcaaatcagggataatgtctccactaaatcaagttgagctaccacttgaggtc
gctccatcatctaactctggagggcatacgcatatattatcacagtatgctgcacctctt
catctgtcatctgctacattgatggaggatgagaagctggcagctttaggcttaactgat
cagctaccttctgcgcaaggattgctacaagctactccatcccagtcaccattttctgtt
aatcaacttcctgcagcaatacctaacattggaactcacgtaattatcaaccagaagctt
aatggacttggcttacacttgcattttcagagaatcgttccaatggcaatggatagagct
atcaaagaaatagtgtcaggaattgttcagcgcagtgtttctatagccactcaaacgact
aaggagcttgttttgaaggattatgccttggaattggatgagacgcgcatatttaatgca
gcacatttgatggttgcaagtctggcgggaagtctagctcacgtaacctgcaaggaaccc
ttgcgaacttcaatattgagtcacctaagaaatttatttcagagtttgaatctcgcaagt
gatattcttgaacaagccgttcaaattattaccaatgataatctggatcttggttgtgct
gtcattgaacaggctgctaccgataaggcaatacaaacaattgatggagaaataactcaa
caactttcattgagaaggaagcatagagaaggggtgggccctaccttttttgatgctagc
atgtatacacaaggatctatgggtgtggtgcctgaggccctccggcctaaaccgggtcac
ttgtccaataatcatcgtgtatatgaggactttgtccggcttcctttgcaaaatcaatct
agccagattgcttcagcttcatctgccaatgctggtcttgctggtgcttatgcatctgct
tctgcacagcttaacccggcttactcgcctgcacctgtgaatgctggatttgaagccgtc
tctcgtccgctagatgaggcaattgattctacttcggccctgcatctcagtgcttcctca
atgcattctggggtggctgatggtgttactcaacatagttctgaaaatgatcctcctgtt
ggttcatttgcttctgctgttccagcgcctgagttgcatccagtggattcttctgatgcc
gttaaggaacctggagcctcattaccattgccttcacctgctgctgctgctgctgagcgt
cttggaagtagcatctcagaaccttcattcagcacaagggacgcattggataaataccag
attgtttctcaaaagctggaagcgttggtgattaatgatggcagagaagcagaaattcag
ggagttgtagctgaagttcctgagatcatactcagatgtgtgagtcgagatgaggctgct
ttagctgtagctcaaaaggttttcaaggggttgtacgagaatgcatcaaaccctgtgcat
gttggtgctcatcttgcaattctgactgctattcgtgatgtttgcaagctagctgttaag
gagcttactagttgggttatatattcagatgaagagcggaagtttaacaaagatatcact
gttggccttattcacagtgaattgctaaatcttgcagagtataatgtgcatatggcaaaa
cttattgatggaggcaggaataaagctgcgactgagttttctatatctcttcttcaaacc
ttggctgtagaagaatctaaagtaatttcagagcttcataatcttgtagatgcattagca
aagcttgcttcgaaacctgggtatcccgagtcactgcagcagttggttgagatgatcaag
aatcctactgccaatgtggctgctgcttctggcgttaatgttggaaaagaagacaaggcc
agacaatctagagacaaaaaaactcctggtgtctccgttagtaaggaagacttaagtaat
gtagagtcccttgaaccagatcctaccggtttccgtgagcaggtttctatgctgtttgcg
gagtggtatcggatttgtgaacttcctggtgcaaatgatgcagcttgtacgaattacatt
ctacagttgcatcaaaatggactgttgaagggggatgagacgactgagagatttttccgt
ctcctcaccgaactttctgttgcgcattgcctatcttctgaggtgattaattcaggcaca
ttgcaagcaccacttcaagtgcagagtttatccttccttgccattgatatttatgcaaaa
attgtcttttcaattctgaaggggtccaccaatagaccattccttctgtctaagattcta
gcggtgactgtcaaattcattcaaaaagatgcagaggagaagaaatcatcttttaatcca
aggccatattttagattgtttatcaattggcttatggatcttggttcgctagaacccctt
gtggatggatcaaactttcagattttgacaatctttgcaaatgcatttcatgctttgcag
ccccttaaagttccctcattcagctttgcttggctcgagttggtgagccacaggagtttc
atgccaaaaatgctcacaggaaacaatcagaagggttggccccatatccaacggttgctg
gtagacttgttccaattcatggagccatttttgaggaatgctgaacttggagcttcggtt
cattttctgtataaaggcacactgagggtgttgctagtgctactccatgatttcccagag
ttcttgtgcgattatcattttaccttctgtgatgtcattcctccaagctgcattcaaatg
cggaatattattctcagtgcatttccccgtaatatgagactgccagatccatctactcct
aatctgaagatcgatttgctggcagaaatcagccaatctcctcgcattctttctgaggtt
gatgcagcactaaaggcaaaacagatgaagaatgacgtagatgagtatctcaagacaagg
cagcaaggctccccatttttgagtgatcttaaacagaagttgctccttgcaccaagtgaa
gttgccactgccggtacccactacaatgtacccttgatcaactcccttgtgctctatgtt
ggcatgcaggccatccaacagcttcaatctagaagtgctcatgcaccatccaccccaggt
gctccactggctgtatttttggtgggtgctgcgttggatattttccagactttaataatg
gacctcgataccgaaggccgctaccttttcctaaatgcggtcgcaaaccaactccgctat
ccaaatactcacacacattacttttcgttcatcctcctttacttgtttgctgagtcacac
caggaaattatccaagagcaaattacgagagtattgttggaacgtctgattgttaatcgg
cctcatccatggggtcttctcatcacttttattgagcttataaagaatcccaggtacaac
ttttggaaccgaggtttcataagatgtgcaccagaaatagaaaagctctttgagtcggtc
tctcgatcttgcggtggcccgaaaccagtggatgagagtatggtctcgggttgggcacct
gacaacgcacactag
DBGET
integrated database retrieval system
