Maricurvus nonylphenolicus: R50073_04350
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Entry
R50073_04350 CDS
T10757
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mny Maricurvus nonylphenolicus
Pathway
mny03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mny00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R50073_04350 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mny03021
]
R50073_04350 (rpoB)
03400 DNA repair and recombination proteins [BR:
mny03400
]
R50073_04350 (rpoB)
Enzymes [BR:
mny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R50073_04350 (rpoB)
Transcription machinery [BR:
mny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R50073_04350 (rpoB)
DNA repair and recombination proteins [BR:
mny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R50073_04350 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
BFM14252
LinkDB
All DBs
Position
482621..486703
Genome browser
AA seq
1360 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKLPHVMDVPFLLAIQLDSYRKFTQADLSPEARLDVGLHAAFKSV
FPIVSYSGNAALEYVSYVLGKPAFDVNECVSRGVTFAVPLRVKVRLIIYDKDSANKSIKD
IKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLYSARV
IPYRGSWLDFEFDPKDLVYVRIDRRRKLPASILLRALGYTSEQMLEMFFETSSFHVKGDD
FTLELVPSRLRGDVATFDIKDDKGAVLVEEGRRITARHIRQLEKAGVTELSVPSSYLLGR
SLARDLADANTGELLFECNTEITEEVLEKVVAAGITELETLYTNDLDCGPFISDTLRIDP
TRSELEALVEIYRMMRPGEPPTKESAEGLFQNLFFSQERYDLSGVGRMKFNRRLARGEDT
GEGTLSNEDIVDVLKTLIDIRNGKGVVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNSYGFLEAPYRKVV
DGVATDEIEYLSAINEAGYVIAQASAELDKNNKFVEELVSVRHYGEFTLKSADEIEYMDV
SPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKAQKPLVGTGMERNVAADSGVC
VVAKRGGVIERVDASRIVVKANNEEVEAGDAGVDIYNLTKYTRSNQNTCINQRPIVSTGD
LVARGDILADGPSVDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVKEDRFTTIHIQE
LTCIARDTKLGSEEISADIPNVGEGALSKLDESGIVYIGAEVGPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTSTKGTVIDVQVFTRDGLEKDQRSLAIEKSQLDE
IRKDLNEEYRIVEQATFERLRAALVGQKAAGGKGVKKGEALTDAILDELDNESWFKIRMT
DDALNEQLDRAEEQLAERRKDLDERFEDKKRKLETGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVISVIMPVEDMPYDANGEPVDIVLNPLGVPSRMNVGQVLEMHLGMAARG
LGDKINAMFEEQKKVAEIRKFLEEVYNKTGDATAKEDLKSFSDEELLEMAGNLRAGVPMA
TAVFDGAKESEIKDLLRLADLSDTGQVQLYDGRTGDAFQRHTTVGYMYMLKLNHLVDDKM
HARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTK
MYKNIVDGDHRMEPGMPESFNVLVKEIRSLGINMELEHDS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatatactgagaaaaaacgtatccgtaaggatttcggcaagttgccgcat
gtcatggatgtcccgttcctcctggcgatacagctggactcataccgtaagttcactcag
gccgatttatcgcctgaagcacgcctggatgtcggccttcacgcagcctttaaatctgtt
ttcccgatcgtaagctactcagggaacgctgccctggagtacgtaagctacgtactcggc
aagcctgctttcgatgtgaacgaatgtgtttcgcgcggcgtaactttcgctgtgcctctg
cgcgtaaaagtacgcctgattatttatgataaagactctgccaataagtccattaaggac
attaaagagcaggaagtctacatgggtgaaattccactcatgactgataacggtaccttc
gttattaatggtaccgagcgtgtcatcgtttcccagttacaccgttcacctggtgtgttc
ttcgatcacgataagggcaagactcactcttccggtaagctgctgtactcagctcgtgtg
attccttaccgtggttcttggctggacttcgaatttgatccaaaggatctggtttacgta
cgtatcgaccgtcgtcgtaaactgcctgcgtctatcctgctgcgcgctctgggttatacc
tctgagcaaatgctggagatgttctttgaaaccagtagcttccacgttaagggtgatgac
ttcactctggagctggttccatcgcgtctgcgcggtgatgtagcgacctttgacattaaa
gatgacaaaggcgcggtactggtagaagagggtcgtcgtattactgcacgtcatattcgt
cagctggaaaaagccggcgtgaccgaattgtctgtgccttcaagctacctgttgggccgc
tctctggcgcgcgatctggctgatgccaataccggtgagttactgtttgaatgtaacacc
gagattactgaagaagtattggaaaaggttgttgctgcgggtattaccgagctggaaacc
ctgtacaccaacgacctggattgcggtccgttcatttccgataccttgcgtatcgatccg
acccgcagcgagctggaagcactggtagaaatctaccgcatgatgcgtcctggtgagccg
ccaaccaaagaatctgctgaaggtctgttccagaacctgttcttctcgcaagagcgttac
gacctgtctggcgttggccgtatgaagtttaaccgtcgtctggcgcgcggtgaagatacc
ggtgaaggcaccctgtccaacgaagatatcgttgatgtactgaagaccttgatcgatatc
cgtaacggtaagggtgttgtcgatgatatcgatcacctgggtaaccgtcgtgtgcgttct
gtgggcgagatggccgagaaccagttccgtgttggtctggtacgtgttgagcgcgctgtt
aaagagcgtctgtccatggcggaatctgaaggcctgatgcctcaggatctgatcaacgcc
aagccagttgctgcagcagtgaaagagttcttcggctcttcccagttgtcccagtttatg
gaccagaacaacccgctgtctgaggtgactcacaagcgtcgtgtttctgccttgggccct
ggtggtctgacccgtgagcgtgccggctttgaggtgcgtgacgtacacccgactcactac
ggtcgtgtatgtccaattgagacccctgaaggtccaaacattggtctgattaactctctg
gcaacctacgcgcgtactaacagctacggtttcctggaagcaccttaccgtaaagtggtt
gatggcgttgctaccgatgagatcgagtacctgtccgcgattaacgaagctggctatgtc
attgcgcaggcttctgcggagctggacaaaaacaacaagtttgttgaagagctggtttct
gttcgtcactacggtgaatttaccttaaagagtgccgacgaaattgagtatatggatgta
tcaccacgtcaggtggtatccgtagcagcctcgctgattccattcctagagcacgatgat
gcaaaccgtgcattgatgggatcgaacatgcagcgtcaggccgtgcctactctgaaggcg
cagaagccactggtaggtaccggtatggagcgcaatgtagctgctgactccggtgtctgt
gtggtggccaagcgtggcggtgttatcgagcgtgttgatgccagccgtattgtggttaaa
gccaacaacgaagaagttgaagccggtgatgcaggtgtagatatctacaacctgaccaag
tacacccgctctaaccaaaacacctgcattaaccagcgtccgatcgtatcgaccggtgac
ctggttgctcgcggtgacattctggccgacggcccatccgtagacttgggtgagctggca
ctgggtcagaacatgcgcatcgcctttatgccgtggaatggttacaactttgaggattcc
atcctggtctccgagcgtgtggttaaagaagatcgcttcaccactatccacattcaggaa
ctgacctgtattgcacgtgacaccaagctgggcagtgaagaaatttctgccgatatcccg
aacgtgggtgaaggtgcactgagcaagctggatgagtccggcattgtttacatcggtgca
gaagttggccctggtgacattctggtaggtaaggtgacacctaaaggtgaaacccagctg
acgccagaagaaaagctgctgcgtgcgatcttcggtgagaaggcgtctgacgttaaggac
acctctctgcgtgttcctaccagtaccaagggtactgttatcgacgttcaggtgttcacc
cgtgacggtctggaaaaagatcagcgttctctggcgattgaaaagtcccagctggacgag
atccgtaaagatctgaacgaagagtatcgcattgttgagcaggctactttcgagcgtctg
cgtgctgctctggttggccaaaaggctgctggcggtaaaggcgtgaagaaaggcgaagcg
ctgactgacgcgattctggatgagctggataacgaatcctggttcaagatccgcatgacc
gacgatgcattgaatgaacagctggatcgtgctgaagagcagctggctgagcgtcgcaag
gatctggacgagcgtttcgaagacaagaaacgcaagctggaaaccggcgatgatctggcg
ccaggcgtactgaagattgttaaggtttacctggcaatcaagcgtcgcatccagccgggt
gacaagatggccggtcgtcacggaaacaagggtgtaatctccgtgattatgcctgtggaa
gatatgccatacgatgccaacggtgagcctgttgatatcgtactgaacccactgggtgtg
ccgtcgcgtatgaacgtgggtcaggttctggaaatgcacttgggtatggctgcccgtggt
ctgggtgacaagatcaacgccatgttcgaagagcagaagaaagttgctgaaatccgcaag
ttcctggaagaggtctacaacaagactggcgacgccacagccaaagaagatctgaagtcc
ttctctgatgaagagcttctggaaatggctggcaacctgcgtgccggtgtgcctatggca
actgcggtatttgatggtgcaaaagaatctgaaattaaagatcttctgcgcttggctgat
ctgtccgataccggtcaggttcaactgtatgacggtcgtaccggtgatgcattccagcgt
cacaccacggttggctacatgtacatgctgaaactgaaccacctggttgatgacaagatg
catgcccgttcaaccggatcttacagcctggttactcagcagccgctgggtggtaaggca
cagttcggtggtcagcgtttcggggagatggaagtatgggcactggaagcatacggtgct
gcttacactctgcaggaaatgcttaccgttaagtctgatgacgtggccggtcgtaccaag
atgtataagaacatcgttgatggcgaccaccgtatggagcctggtatgccagaatccttt
aacgtactggttaaagagattcgctcgctgggtatcaatatggagctggagcacgactcc
taa
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