Macrobrachium nipponense (oriental river prawn): 135209629
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Entry
135209629 CDS
T09903
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135209629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135209629
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135209629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
135209629
NCBI-ProteinID:
XP_064098407
LinkDB
All DBs
Position
38:complement(11026278..11063574)
Genome browser
AA seq
2513 aa
AA seq
DB search
MAETQESDGEEIFSIFSKDEKEGLSEVVRRKLEDVWSSRTKEIRCLKVEIDKIKINSDQE
RFNLEKELVTLRGQLEEEVALKEEAASARESNESRIIKLEDELGDYKTKVISLTRELQQS
QNEQENVSSQSAAMAGSLETRTRRIQELQEQVNVLEEQLTQALRSKCDAMLKSEEAASKE
LKAQYKEKRLEQEKSLLSRQVDVLQQQIRERAEENLDQRREHSSTILNLQATLNRNIEEL
RVVKEEKEMCQKQIDEKNKRIEELLTALNSSRESETKLDEMYRQELAAQKKLAEIYQGSA
EDEKERCVELEKALEEHRQLLQSASEQYGLLERTKEKLEEEHAVARRQSEALVKELKEEL
DKANVLLSASAKKDSSGLEELSPAASAASNLISRGLSLTQLYSEYMNVSEKLHAVEEENK
RLHRYVDGIVEEIEERVPVFKKHREEHQKALETINSLHAQLESCLSQTEKQKLDLDESVR
RRSYLERENDRLNQQAKDLSKQVTVLVTQVEAARAGLPPPPIPREMSGPTSADVISDRLV
AFRNVSELQEQNKMLRESLRKLSEDMETSEAATISSRTKEMEEELKSLKGQLNELQALRE
RQESLMDNIAKQRDMYKSFCSERSPKTQRTPPVKQPPQMFGVPQEEVQKLQKELEAARKK
LEETNKEHDDYRMEVKKNEKMQQDEYNRLRSTMEKTMSENVKLLSQAEFNDERLKVLQHN
SEVLQRQLGALQNNNSTLHGIVGRHEGTIEAQRREFMLLQKEHSRMQVMCDNMREEMKLL
KEAEARLLAERESITRNQSSQAIVLANIESIKNNLERNDSEKTMRLENQVSELTERCSRL
QAKLETNTDFKEAQSKLNIAEGQLKNLQSENKNLTKQVMDAKAEIMTLKSRLKETQERVR
TPITSPVLRPRSPLIGSSPGASGGSTIRLGGPQLRDLQVQLNEEKAKVTSLQGNLDDAKK
TISELMNVTKQQEKQLKDSGDSFKVTQEQFIKMQKERDEMEAMITRLQSKLSAISSDSEN
TKARLQTMLDESKDELQASEKRLKDANESFQKAKEEEERARKEAQKLHEQSVEVQNKYER
EVMLHGTDLKTLAELKKRQAEFDSELQKVTAAKIKAEEAVRDTRLGFEKRENILRRENKD
LMVRAHELEEQNKALLDNFTQLSDKMAAIQAKLSSTELPAGDAANISISEDEARTSDQLR
EVIKYLRRERDVAAGKYEVAEAETQRLVAQKKLMETQIQDVQKNLAEEREKNKASLESAS
NYGELMRKVLTVDALADSNRLLREEKESLESLYEEYKAKCEVLEKQIEPINERHKSSLNK
IEALMLEKKSMESEKDLYKKRTQELVEKLNHAKPEDFMKLQQNFAEQQKSLQAKENELSK
LKLQLQQVQKSLQMTIAQKNQFNSQLQSSREEARKLGEEVRKTAMEKARIQQQLADETKK
LNLERTRLQQQLAQTQERVRILEASAQQSEANHQQEMRKLQEQFTQDKQQLQENREQALE
SKGREDQLRHQLEIARKEKEEIESQVEDAKQKIAEISAKAENFEKQAVQLRKIATKYKRQ
AESSMSASPGAPDMGEEGMVQPTVEKVKELEVSIHSLRQKQESTEEECLKFQQEITTLKE
NLSTKESEGQNLKAQLLRKDAEFSKLRAELEAKKRELQSSQMLSLHISDLTKRLEESQSK
KQASESRLIQYEKERDQNAKEVEMLNKKLQMQQRQIENLQKQAAVTSKPSTSGVSSEKSG
FEPPPTANIKPMNAPVAPSASPRSQTATQVVPPSRPIPTASIRPMAPPSGGSAQPQGSTV
VVVSPLETHSDGMVSSTVTLPQATVTPTPAISAPTLLTTATTTPASTLTATVSPTPASAS
LTTPVAPATPLSSNTAAQSSQSLTATQSTSVSQSSVSQSAAALEASSASQSSTVSQPGSS
IKPPGLQTTVAPSSSVAVQSPVSSKATSAQQPATASTSVVTPLVSAATGVSGSSMTPTKS
PGTTPLSRQQETLEGTADALVSQAIALVTPLSSQEAAGPSGVSIRKRKLTSTTEASPDMK
RPHVDDEGAMSSEDAGPSSSHASRDKSEEARHDVILLDSDEEDGNEDYPDQGDDEEDDDG
PVDHESRGPAARVTDSDEDMDHDDSSREASQGFEAGQETREAEGDLGNAEAEAEAASEAS
SGTRREVESQDVQSERPQPSAGPSQPSSSSQGSETPSQTGSRVLAIPRPFVRQDRMSAVG
RQTLPPISQFSQYEEGGDDSIVPSTPTLFLPRRDGFSEAVSSPQVPSSGFVFGSNPDIAN
PTQRSGLAQMAEGGLIDDTRIDLGQLDEGNRSQPTTPLHRSPTGTEGGVSTSEGRGAARE
PPSVIITGAEQSNDEASQGSQDHFTEADSMAIAVEDGDEDDDEEELEDAEEEEEEGEEEE
EEDQGDDDGDLEEHGEDQSQGELEERGSSDDSSQPSQEVSSIPGHRNRRITPITWNDHPQ
RGLNARRGAGRSPLAGRGGSRGVLNRERAAGAGAHGGRARRSRPGTFHRGVHN
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacacaggagtccgatggcgaagaaatcttctcaatatttagcaaagatgag
aaggagggcctgtcagaagtcgtccgaaggaaactggaggacgtgtggtcgtcgaggact
aaggagatcaggtgtctgaaggtggagatcgacaagatcaagataaactcagatcaagaa
agatttaatttagagaaagaactggtaacgctacgtggacaattggaggaagaagtagcc
ttgaaagaggaagccgccagtgccagagaatccaatgagagtcggataatcaaattggaa
gatgaactgggggactacaaaacaaaagttatctcgctaacacgtgaattacaacagtcc
cagaatgagcaagaaaacgtatcttcacagtcggctgccatggctggtagcttggagact
agaacacgtagaattcaggagcttcaggagcaggtcaatgtgttggaagaacagctgacc
caggccttacgctctaagtgtgatgccatgcttaagtctgaagaagcagccagcaaagaa
cttaaggctcagtacaaagagaaaaggttagaacaagaaaaaagcctgttgtctcgccaa
gttgatgtattgcagcaacagattagagaacgagctgaggagaatcttgaccaaaggaga
gaacattcctcaacaattttgaacctgcaggcaactctcaatcgtaacattgaagagctg
cgtgttgtcaaggaggagaaagaaatgtgccaaaaacagattgatgaaaaaaataaaaga
attgaggagctcctcactgctttgaattcatccagagagtcggagacaaagttagacgaa
atgtacaggcaagagcttgcagctcagaagaagttagcagaaatatatcaagggtcagcg
gaagatgagaaagaaaggtgcgttgagctagaaaaggctcttgaagaacatcgtcaacta
ttacagagcgcaagcgaacagtatggccttttggaaagaacaaaagaaaaattagaggag
gaacacgcagttgccagaagacagtctgaggctttggtcaaggaactgaaggaggaattg
gacaaggctaatgtgctgttgagtgccagtgctaagaaggatagttcaggcctggaagag
ctgtctccagcagcaagtgcagcaagcaacttgattagccgtggcttaagtcttacgcaa
ctgtattcggagtacatgaatgtttcggaaaagcttcatgctgtcgaagaggaaaacaaa
agactccatcgatatgtagatggaattgtagaggaaattgaggaacgagtgccagtcttc
aagaagcatcgtgaagaacatcaaaaggctctggaaactattaattctttgcatgcccag
ttagaatcctgcttgtctcaaacagagaaacagaaacttgacttggatgaatctgtgaga
cggcgatcgtacctggagagagaaaacgatcgtctaaaccagcaggccaaggacttgagc
aaacaagttactgttcttgtcactcaggtagaagctgcaagggctggattaccaccacct
cccattccaagagagatgtcaggccctacatcagcagacgtcatatcggatcgcttggtt
gctttccgtaatgtgtcagaacttcaggagcagaacaagatgctacgggagtctttacga
aaattgtcagaagatatggaaacgtcagaggcagctactatcagtagtagaactaaagaa
atggaggaggagctcaagtctttgaagggacagttgaatgaattacaagcactaagggaa
cggcaagagtctctcatggacaacattgcgaaacagagggatatgtacaagagtttctgc
agcgaacgttctcccaagactcagagaactcctcctgtcaagcagccccctcagatgttt
ggagtgccgcaggaagaggtgcagaagctacagaaggaattggaggcagccaggaaaaaa
ctggaggaaaccaataaagagcacgacgattacaggatggaagttaagaagaatgaaaaa
atgcagcaagatgaatacaataggcttagaagtacaatggagaaaacaatgagtgagaat
gtgaagctgctatctcaagccgagttcaatgatgagcgtctcaaagtcttacaacataac
tctgaggtactccagcgtcaactaggagctctgcagaataacaattctactttgcatggc
attgttggtcgccatgagggtaccattgaagcacaacgccgagaatttatgttgctgcag
aaggagcactcccgtatgcaagtgatgtgtgataatatgagagaggaaatgaaattactc
aaggaagctgaagcaagactgctggcagaaagagagagcataacgcgtaaccagtcatcc
caggcaatagtccttgccaatattgaatcgattaagaacaacttagagaggaatgacagt
gaaaaaactatgaggttggagaaccaagtttctgaattaacagaaagatgttcccgactt
caagcaaaattggaaacaaacaccgattttaaggaagcccagtctaagttgaacatagct
gaaggtcaattgaagaacctccagagtgaaaacaaaaacttgaccaaacaggtcatggat
gctaaagctgagattatgacactcaaatcaagactgaaagaaactcaggaacgtgtaaga
acacccatcacttcgccagtgctgagaccaaggagtcctttgataggcagcagccctggc
gcttcaggaggctctaccattaggttgggtgggccccagttgcgagatttgcaggtgcag
cttaatgaagagaaagcaaaagtcacatccttgcaaggaaacctggatgatgccaagaag
acaattagtgagttaatgaatgtaacaaagcagcaagaaaagcaattgaaggattctggc
gactcttttaaagttactcaagagcagttcattaagatgcagaaagagagagatgagatg
gaagcaatgataaccaggttacaaagtaaactgtcagctataagttcagacagtgaaaat
acaaaggcccgtttacaaactatgcttgacgagagcaaggatgagttgcaagcatcagag
aagaggcttaaggatgccaatgaatcattccaaaaagccaaggaagaagaagaaagggca
aggaaggaggcacaaaagcttcatgaacaatctgtagaagtgcagaataagtatgagaga
gaagtaatgttacatggtacggatttgaagactttggcggagttgaagaagcgacaagct
gaatttgactctgaattgcagaaagttactgcagcaaaaatcaaagccgaagaagctgtg
agggatactcgcctagggtttgagaagcgggaaaatatattgcgtcgggaaaacaaagac
ctgatggtacgagcgcatgagttggaagagcagaacaaagcactcttggataatttcacc
cagctctctgataaaatggcagctattcaagccaaactgtcatctacagaactgccagca
ggagatgctgcaaatatatcaatttcagaagatgaggctcgtacttcagatcaacttcgt
gaagttattaaatacctgcggcgtgagagagatgttgctgctggaaagtatgaggtggca
gaagcagagacgcaacgactggttgcccaaaagaaactgatggaaactcagattcaagat
gttcagaagaatcttgctgaagaaagggagaagaataaggcatcattggagagtgccagt
aactatggtgaactaatgcgaaaagtactgactgtcgatgctctggcagacagcaatcga
ctgctgcgagaagaaaaggaatcgcttgaaagcctctatgaagaatacaaggccaagtgt
gaggtcttggagaaacagattgaaccaattaatgagagacataaatccagcttgaataag
atagaagcattaatgttggagaagaagagcatggaaagtgagaaagacctgtataagaag
agaacacaggaattagttgaaaaactgaatcatgctaagccagaggacttcatgaagctt
caacaaaactttgcagaacaacagaagtcactccaggcaaaggaaaatgaattatcaaaa
ttaaaactacagcttcagcaagttcagaagagtcttcagatgaccattgcacaaaagaac
cagttcaatagtcagctccagtcatctcgtgaggaggctcgaaaattaggggaagaagtc
aggaaaaccgctatggagaaagcacgcattcagcagcagttggcagatgaaaccaagaag
ctgaatctagagagaacaagacttcaacagcagcttgcacaaactcaagaacgtgtgcgc
atattggaagcaagcgcacagcagtcagaggctaaccatcagcaggaaatgaggaagcta
caggaacaattcacgcaagacaagcagcagttacaagaaaacagagagcaggcattggaa
tcaaagggacgagaagatcagttgcgtcaccagctggagattgcaagaaaagagaaggaa
gaaattgaatcccaggtggaggatgccaaacaaaagattgctgaaatcagtgcaaaggct
gaaaactttgaaaagcaggctgtacagcttcgcaagattgccaccaaatacaaacgacaa
gcggaaagcagcatgagtgcatcaccaggagctccagatatgggtgaggaaggtatggta
cagcctactgttgagaaagtgaaggagttagaagtgagcattcactcgttacgtcagaaa
caggagagtacggaagaagaatgtttgaagttccagcaagaaataactacattgaaggaa
aatttgtcaactaaagaaagtgaaggacagaacctcaaagcacaactacttaggaaagac
gcagaattttctaaactccgtgctgagcttgaggctaagaagcgtgagttacaatcgtca
caaatgctttcgttgcacatatcagatttgaccaagagattagaggaatctcaaagtaag
aagcaggcatctgaaagccgccttattcagtatgaaaaagagcgtgatcaaaatgccaag
gaggtggaaatgctgaataagaagttacagatgcagcagcgtcaaatagaaaatctccag
aaacaggcagctgtgacgtcaaagccatcaacaagtggtgtgtcttccgagaaaagtggg
tttgaacctcctcccacagctaatattaaacccatgaatgctcctgtggcaccttctgct
tctccacgctcacagacggccacacaggtggttcctccttctcgacctataccaactgca
agtatcagacctatggcaccaccatcaggtgggtcagcccagccacagggctcgacagtt
gtagttgtgtctcctttggaaactcacagtgatggaatggtttcatctacagtgactctt
cctcaagccacagtcactccaactccagccatatctgccccaacactgttgactactgca
actactacaccagcgtcaacacttacagcaaccgtttctcccacacctgcctcggcctcg
cttacaactcccgtggctccagctaccccattgtcatcaaacacagcagctcagtcttct
cagtcacttactgctacacagtccacatcagttagccaatcatctgtctcacagtcggca
gcagctctagaagcgtcatcagcttcacagtcgtctacagttagtcaaccaggttcttcc
attaaacccccaggtttgcaaactactgtggctccatcatcatcagtggctgttcagtca
ccagtaagtagtaaggcaacttctgcgcagcagcctgcaactgctagtacatcagtagtt
accccattagtgtcagcagccacaggggtatcaggctcatccatgactccaacgaagtcc
ccaggaactacaccattatctagacagcaagagaccctggaaggaactgctgatgctctc
gtgtcccaagctattgctcttgttacacccctcagctcccaagaagcagctggtccctct
ggtgttagcattcgaaaaaggaagttaacgtcgactactgaggcctctcctgatatgaag
cgacctcatgttgatgacgaaggcgccatgtcgtccgaagatgcgggaccgtcgtcgtcg
catgctagccgtgacaaaagtgaagaagcccgtcacgatgttattcttttagattcagat
gaagaggatgggaatgaagattatcccgatcaaggtgatgacgaggaagacgacgatgga
cctgtcgatcatgaaagtcgtggcccggcagctagggttacagactcggatgaagatatg
gatcatgacgattcgagtcgggaagccagccaaggatttgaagctggacaggaaactcgg
gaagcagagggggacttgggaaatgcagaggcagaggcagaagctgcttctgaagcctct
agtggaactaggcgagaggttgaatcccaggatgtacagagtgaaagaccacagccatct
gctggaccaagtcagccttcttcatccagtcagggaagtgagactccctctcagactggt
tcacgggttcttgcaatacccagaccatttgtacgtcaggacaggatgagcgcagttggc
cgtcaaactttgccacctatcagccagttctctcagtatgaagaaggtggtgatgacagc
attgttccatctacgccaacactctttctaccaagacgggatggcttctcagaagctgta
agctctccccaggttccttcaagtggattcgtatttggctcaaatcctgatattgcgaat
ccaactcaaagaagtggcttagctcagatggctgagggtggtcttatagatgacacaaga
attgaccttggacaactggacgaagggaatcgatcccagcctactactcccttgcatcga
tcacccacaggcactgagggaggtgtgagtacgagtgaggggagaggcgccgctagagag
cctccctcggtcatcatcactggagctgagcagtcaaatgacgaggcctcacaaggatca
caggaccacttcacagaagcagactcgatggccattgctgtggaagatggcgatgaggac
gatgacgaggaggaattggaagatgcagaagaggaggaagaggaaggggaagaggaggaa
gaagaagatcaaggggatgatgatggtgacttagaggagcatggtgaggatcaaagtcaa
ggggaattagaggaacgtggtagcagtgatgacagtagtcaaccctcacaagaagtttct
agcattcctggtcatcgaaatcgtagaattaccccaattacatggaatgatcatccccaa
agaggactgaatgctcgtagaggcgcgggacgaagcccccttgctggccgtggtggatcc
aggggtgtgctaaacagagagagggctgcaggagcaggtgctcatggcggacgggcaaga
cgttcgaggcctggcacattccaccgtggagtgcataattaa
DBGET
integrated database retrieval system
