Moritella sp. 36: HWV03_21050
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Entry
HWV03_21050 CDS
T08847
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
moq
Moritella sp. 36
Pathway
moq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
moq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HWV03_21050 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moq03021
]
HWV03_21050 (rpoB)
03400 DNA repair and recombination proteins [BR:
moq03400
]
HWV03_21050 (rpoB)
Enzymes [BR:
moq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HWV03_21050 (rpoB)
Transcription machinery [BR:
moq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HWV03_21050 (rpoB)
DNA repair and recombination proteins [BR:
moq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HWV03_21050 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QUM91083
LinkDB
All DBs
Position
complement(4740050..4744087)
Genome browser
AA seq
1345 aa
AA seq
DB search
MVYSNTEKKRIRKDFGKSAPVVAKPQMLAIQTSSFKKFLEMDHTGEYGLEAAFRSVFPIK
SYSGTSELQYVSYRLGEPVFEVKECQTRGVTYSAPLRVKLRLVLYDRDAPAGTIKDIKEQ
EVYMGEIPLMTETGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYNARVIPYR
GSWLDFEFDPKDSLFVRIDRRRKLPSSIILRALEFTTEEILAIFFDTTRFEVKDGKLLME
LQPDRLRGETAVFDIVANGEVYVENGRRVTARHIKKFEKNGVTEIEVPLEYIAGKVASKD
YVNEETGEVIVAANAELTLESVAELSQAGIKVIDVLYTNDLDVGSYMSDTLRVDSTTNKL
EALVEIYRMMRPGEPPTREAAESLFQNLFFAEERYDLSTVGRMKFNRRIGREEDTGSGIL
NKADIVEVMKTLINIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLS
LGDLDAVMPQDLINAKPISAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRLCPIETPEGPNIGLINSLAVFARTNDYGFLETPFRKVINGQVT
NDVQYLSAIEEGLYAVAQANATIDTNGVLQDEFIPCRHKGETTFMSADQIQYMDVSPQQI
ISVAASLIPFLEHDDANRALMGANMQRQAVPTLNADKPLVGTGIERAVAIDSGVTVVALR
GGSIDYADASRIIVKVNEDELVPGEAGIDIYTLTKYTRSNQNTCINQRPTVLTGEAVVKG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVKEDRLTTIHIQELSSIA
RDTKLGSEEITADIPNVGESALSKLDESGIVYVGAEVKPGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNSVYGTVIDVQVFTRDGVDKDKRAQDIEQMQLREAKKDL
TEELSIFEESLFGRVKSLLLAAGKTEEQLNAVSRAQWLEIVLSDEEQQIQLEGLAKQHDE
LRADFDSKFDIKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIV
PIEDMPHDKFGEPVDIVLNPLGVPSRMNIGQVLEVHLGLAARGIGSKIDNMIKEQQDLAK
IREFMQKAYDIGNTHQKVDLSTYSDEQVRVLAHNLRKGLPMATPAFDGAAEAEIKEMLKL
ADLPESGQLELFDGRTGDVFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMDPGMPE
SFNVLLKEIRSLGINIELDENKGKK
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggtttactctaataccgaaaaaaaacgtatccgtaaagactttggtaaaagtgcacca
gttgtggctaagccgcaaatgttggctattcaaactagctcttttaaaaagtttttagaa
atggatcacacaggtgaatacggcctggaagcagcattccgtagcgtgttccctattaaa
agttactctggaacttctgaacttcaatatgtatcgtaccgtttaggtgaacctgtattt
gaagttaaagaatgtcaaacccgtggtgttacttattctgcaccgctgcgtgttaaatta
cgtcttgtattatacgatcgtgatgcaccagcaggtactattaaagatatcaaagaacaa
gaagtctacatgggcgaaatcccattaatgactgaaactggtacttttgttatcaatggt
acagagcgtgttatcgtatctcagttacaccgtagtcctggtgtattctttgatcacgac
aaaggtaaaacccattcatcaggtaaagtattatataacgcacgcgttattccttaccgt
ggttcatggttagactttgaattcgatccgaaagatagcttattcgttcgtattgaccgt
cgacgtaaattaccatcatcaattattcttcgtgcacttgagttcacgacggaagaaatc
ttagcaatcttcttcgacactacgcgttttgaagttaaagatggcaagttattgatggaa
ctacagccagaccgtctacgtggcgaaacggcggtatttgacatcgtagctaacggtgaa
gtatacgttgaaaatggtcgtcgtgttactgctcgtcatatcaagaaatttgaaaagaac
ggcgtaacagagatcgaagtaccattagagtatatcgctggtaaagtagcctctaaagat
tacgttaatgaagaaacaggcgaagtgattgttgcagcgaatgctgaactaacactagaa
tctgttgctgaattatcacaagctggtatcaaggtaattgatgttctttatacgaacgac
cttgatgtaggtagttacatgtctgacacattacgtgttgactcaactactaacaaactt
gaagcgctagttgaaatctaccgtatgatgcgtcctggtgaaccaccaacgcgtgaagcg
gcagaatcattattccaaaatcttttcttcgcagaagaacgttatgatctatctactgta
ggtcgtatgaagttcaaccgccgtattggccgcgaagaagatactggctcaggcattctg
aacaaagctgatattgttgaagtgatgaaaactttgattaatatccgtaacggtaaaggc
gaagttgatgatatcgatcaccttggcaaccgtcgtattcgttcagttggcgaaatggca
gaaaaccaattccgtgttggtttagttcgtgtagaacgtgctgttcgtgaacgtctaagt
cttggtgatcttgatgcagtaatgccacaagatttaatcaatgctaaaccgatctcagct
gcgatcaaagagttctttggttcatcacaactgtctcagttcatggatcaaaataaccca
ttgtcagaagtgacgcacaaacgtcgtatttctgcattaggtcctggtggtctaacacgt
gaacgtgctggttttgaagtacgtgacgtacatccaactcactacggtcgtttatgtccg
attgagactccagagggaccaaacattggtctaattaactcactagctgtatttgcccgt
actaacgattatggtttcttagaaacgccattccgtaaagttatcaacggtcaagttact
aatgacgttcaatacctttctgctatcgaagaaggtctgtatgcagtagcacaggctaac
gcaactatcgatacaaatggtgtattacaagatgaatttattccatgtcgtcacaaaggt
gaaacaacctttatgtctgcggaccaaattcagtatatggacgtatctccacagcaaatt
atttctgtggcggcatcgctaattccgttcctagaacacgatgatgctaaccgtgcattg
atgggtgcgaatatgcaacgtcaagcagtaccaacactaaatgctgataagccattagta
ggtactggtattgaacgcgcggtagcaatcgattctggtgtaactgttgttgcgctacgt
ggcggttcaatcgactatgctgatgcaagtcgtatcatcgttaaagttaacgaagatgaa
cttgtaccaggtgaagcgggtattgatatctacacgctaactaagtacacacgttcgaac
caaaacacatgtattaaccaacgcccaacagtattaactggtgaagcagtggttaaaggt
gacgtgcttgctgacggtccttcaacagacttaggtgaattagcacttggccaaaacatg
cgtatcgcattcatgccttggaatggttacaacttcgaagattcaatccttgtatctgaa
cgtgttgtaaaagaagatcgtctaacgacaatccacattcaagaattgtcatctattgcg
cgtgatactaaacttggtagcgaagagattactgcggatatccctaacgtgggtgaaagc
gcattatctaaactagatgagtctggtattgtttacgttggtgctgaagttaagccgggt
gatatcctggtaggtaaagtaacccctaaaggtgaaacacaattaacgcctgaagaaaag
cttctacgagctatcttcggtgaaaaagcatctgatgtaaaagatagttcattacgtgta
cctaactctgtttacggtactgtaattgacgtgcaagtatttacccgtgatggcgtagat
aaagataaacgtgcacaagacatcgagcagatgcaactgcgtgaagcgaaaaaagactta
actgaagagttatctatcttcgaagaaagcttattcggtcgcgttaaatctctattactt
gctgcaggtaaaacggaagagcaacttaatgctgtttctcgcgcacaatggttagagatt
gttctttctgatgaagaacaacagattcaattagaaggcctagctaagcaacatgatgag
ctacgtgctgactttgattctaagtttgatatcaaacgccgtaaaattacccaaggtgat
gacttagcaccaggtgtacttaagattgttaaagtatacctagctgttaaacgtcgtatc
caaccgggtgataagatggctggtcgtcatggtaacaaaggtgtgatctcaacaatcgtt
cctattgaagacatgccacacgataagtttggtgagccagttgacatcgtacttaacccg
ctgggtgtaccatcgcgtatgaacatcggtcaggtacttgaagttcacttgggccttgct
gctcgtggtatcggtagtaaaatcgataacatgatcaaagaacaacaagatcttgctaag
atccgtgaatttatgcaaaaagcatacgacatcggtaatacgcatcagaaagttgattta
tcaacatactctgacgagcaggttcgtgttcttgcgcacaacttacgtaaaggtctgcca
atggctacacctgcgtttgatggtgcagctgaagctgaaatcaaagaaatgcttaaattg
gctgatttaccagaatcaggtcaattagagttatttgatggtcgtactggtgacgtattc
gaacgtccagttaccgttggttacatgtatatgctgaaactgaatcacttggttgatgac
aagatgcatgcacgttctaccggttcttacagcctagttactcagcaaccgctgggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaagtatgggctctggaagcatac
ggtgcagcatatactctacaagagatgctaactgttaagtctgatgacgtgaacggtcgt
actaagatgtataaaaacatcgtagacggcgatcatcgtatggacccaggtatgcctgaa
tcattcaacgtattgttgaaagagatccgctcattgggtatcaacatcgaactagatgaa
aacaaaggtaagaaataa
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integrated database retrieval system
