Microtus oregoni (creeping vole): 121446821
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Entry
121446821 CDS
T08307
Symbol
Cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121446821 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121446821 (Cnot1)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121446821 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121446821 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121446821
NCBI-ProteinID:
XP_041505567
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMSKGRPPSASSLDAISPVQIDPLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgtctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacacagtttctgattcaggagtgtgcctcg
ctgattacaaagccaaattttatctcgacattgtcatatgccattgataatccattgcac
taccagaagagtctaaagcctgcaccccatttatttgcccagctgagtaaagttctcaag
ttaagtaaagtacaagaggtaatttttggtcttgcccttttgaattcttctagttcagat
ctcaggggttttgctgcccagtttataaaacagaagcttccagatcttctgcgttcttac
atagacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacag
gaacaaatagacgcttttcttaagacactgcgcagagattttccccaagaacgttgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcttg
cctgactctggaggggtagctaaaaccatgatggagagctctctggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcgaact
cattcaggattaacagacggtattccattacagagcatctctgctcctggcagtgggatc
tggagtgacggaaaagataaaagtgaaggcgcacaggcacacacatggaatgtagaggtt
ttgattgatgttcttaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagcaaagggcttcataacgtggtttatggt
attcagaggggcctgggcatggaagtgtttccagtggatttcatatataggccttggaaa
catgcagaaggccagctctccttcatccagcattccctcataaacccagaggtcttctgc
tttgccgactacccctgtcatactgttgctactgacattttgaaagcgccaccagaggat
gacaatcgagaaattgccacatggaaaagcttggatttgattgagtctctgctgagactt
gcagaggttgggcagtatgagcaagtgaaacaactcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcacaccttacgccat
gaactcatctctactttgatgccaattttccttggaaaccatcctaactctgccattatt
ttgcactatgcatggcatgggcagggacagtctccatcaattcgccaacttataatgcat
gcaatggcagaatggtacatgagaggggaacaatatgatcaggccaaattgtctcgaata
cttgacgtggcccaggacttgaaggccttgtcaatgctgctaaatggcactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctaacagataaaataagagaacatggggagccttttattcaggcatgcatgacgttttta
aagagaaggtgcccttctattttgggaggacttgccccagagaaagatcaaccgaaaagt
gctcaacttcctgctgaaactctagcaacaatgttggcttgtctacaggcttgtgcaggg
agtgtttctcaggagttatcagagaccatcctcaccatggtagccaattgcagtaatgta
atgaataaggccagacagccaccacctggagttatgtcaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttggtggaatggcatctctt
agtataggtggttcagctgcccctcacacacagagtatgcaaggttttcctccaaatttg
ggttctgcgttcagtactcctcagtcaccagcaaaagcatttccacctctttcaacccca
aatcaaacaactgcattcagtggtatcggaggactttcatcccaacttccagtaggtggt
cttggcacaggaagcctgactggtataggaactggggcccttggacttcctgcagtgaac
aacgacccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccag
cagagtaagatgaaaccttccgacttatctcaggtgtggccagaggccaatcagcacttc
agtaaagagatagatgatgaagcaaacagctatttccagcgaatatataatcatccacca
catccaaccatgtccgttgatgaggtactagaaatgctacagagatttaaagactctact
ataaaaagggagcgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtggcata
attgaaaaaggactggtcacttacatggcattgggtctggccctgcgatatgttcttgaa
gccttacggaagccttttggatcaaaaatgtattattttggtattgctgcactagataga
tttaaaaatagattaaaagactatcctcagtattgtcagcacttggcttctattagtcac
tttatgcagttcccacatcatttgcaggagtatatcgagtacggacagcagtctcgagat
cctcctgtgaagatgcagggctctatcacgacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgcgggtcaggttaacacaatggta
accacctcaacaacaaccactgttgctaaaacggttacagtcaccaagccaacgggagtc
agctttaagaaagatgtgccaccttctataaatacaacaaatatagatacattgcttgtg
gctacagatcaaaccgagaggattgtagagcccccagaaaatattcaagaaaaaattgct
tttatcttcaacaacctctcacagtcaaatatgacccagaaggttgaagagcttaaagaa
accgtgaaggaagagtttatgccttgggtttcccaatatctagttatgaaaagagtcagt
attgagccaaactttcatagcctgtattccaactttcttgacacattgaagaatccagaa
tttaacaagatggttctgaatgaaacctacagaaacattaaagtgctgctgacctctgat
aaagctgcggccaatttctctgatcgttctttgctgaagaacttggggcattggctagga
atgatcacattagctaaaaataaacccattttgcacacggacttggatgtgaaatctttg
ctgctagaggcttatgttaaaggacaacaagagctgctttatgtagtgccctttgttgcc
aaagttctagagtccagcattcgtagtctggtttttagaccaccaaacccctggacaatg
gcaattatgaatgtattggctgagctacaccaagagcatgacttaaagttaaacttgaag
tttgagattgaggtgctctgtaagaaccttgcattagacatcaatgagctcaaacctgga
aacctactgaaagataaagaccgcctgaagaacttagatgaacaactctctgctccaaag
aaagatgtcaaacagccggaagagcttcctgccatcacaacgacaacaacttctacaaca
ccagctaccagtactacctgtacagccacagttccaccacagccacagtatagctaccac
gacatcaatgtctattctctggcaggcttggccccacacattactctaaaccctacaata
cctttgtttcaggctcatccacagttgaagcagtgtgtgcggcaagcaattgaacgggct
gtccaggagctagttcatcctgtggtagatcggtcaattaagattgccatgactacttgt
gaacagatagtcagaaaggatttcgccctggattctgaggaatccagaatgcgaatagcg
gctcatcacatgatgcggaacttgacagctggaatggctatgattacttgcagggagcct
ttactgatgagcatatctaccaacctaaaaaacagttttgcctcagcccttcgtactgca
tccccacaacaaagggaaatgatggaccaggctgctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaaaactgcagtggagaaagcaggccctgagatggac
aagagattggcaactgaatttgagctgagaaaacatgctcggcaagaaggacgcagatac
tgtgatcctgttgtattaacatatcaagcggaaaggatgccagagcaaatcaggctgaaa
gttggcggtgtggacccaaagcagctagccgtatatgaagagtttgcacgaaatgtgcct
ggcttcttacctacaaatgacttaagtcagcctacaggatttttagctcagccaatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggag
cagcatctacatgccattccaccaactctggccatgaatcctcaagcccaagctctacga
agtcttttggaggttgtagtgttgtctcggaattctcgagatgcgatagctgctcttgga
ttacttcagaaggctgtagagggtttattagatgccacaagtggtgctgatgctgacctg
ctgctgcgatacagggaatgtcacctcttggtactaaaagctttgcaggatggcagggca
tatggatctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataaatataatgtggaggctgtggagttgttaattcgaaatcatttggttaacatgcag
cagtatgatcttcatctagctcagtcaatggagaatggcttaaactacatggccgtggca
tttgctatgcaactggtaaaaattctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctgttccataccattgaaaccctcatgaggattaatgctcattccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcacggaggccctaactttatgatgcattctgggatctctcaagcctca
gaatatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctataccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccaacaaggaatacttaagactgatgac
ctcataacaaggttttttcgtctttgcactgaaatgtgtgttgaaatcagttaccgtgct
caagcagagcagcagcacaatcctgctgctaatcccaccatgatacgagccaagtgctat
cacaacctggatgcctttgtccgcctcattgcactgttagtgaagcactctggggaggcc
accaacactgtcacaaagatcaatctcctgaataaggttctcgggattgtagtgggagtt
ctcctacaggatcatgatgttcggcagagtgaatttcagcagcttccctaccataggatt
tttatcatgttgctgttggagctcaatgcacctgagcatgtgttggaaaccattaatttc
cagactcttacagctttctgcaatacattccacatcttaaggcctaccaaagctcctggc
tttgtatatgcctggcttgaattgatctcccatcggatctttatcgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagctgttgattgatttattcaaa
tatttagcgcctttccttagaaatgtggaactcactaaacctatgcaaatcctctataag
ggtactctaagagtgctgctagttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatccctcctaattgtatccagttaagaaatttgatcctg
agtgccttcccaagaaatatgaggctcccagacccattcactcctaacctgaaggtggac
atgctgagtgaaattaacattgcgcctcggatcctcaccaatttcactggagtgatgcca
cctcagttcaaaaaagatctggattcctatcttaaaactcgatcccctgtcacttttctg
tcggatctgcgcagtaacctacaggtatctaacgagcctggcaatcgctacaacctccag
cttatcaatgcactggtgctctatgtagggactcaggccatcgcacacatccacaacaag
ggcagcacgccttcaatgagcaccatcacccactcagcacacatggacatcttccagaat
ctggctgtggacttagacaccgagggccgatatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaacagccacactcactacttcagctgcaccatgctgtaccttttcgcc
gaggcaaacaccgaggcaattcaggaacagatcacaagggttctcttggaacggttgatt
gtaaataggccgcatccttggggtcttcttatcaccttcattgagctgattaaaaaccca
gcatttaagttttggaaccacgagtttgtacactgtgccccagagattgaaaagttattc
cagtctgttgcacagtgctgcatgggacagaaacaggctcagcaagtgatggaagggact
ggtgccagttag
DBGET
integrated database retrieval system
