Microtus oregoni (creeping vole): 121455734
Help
Entry
121455734 CDS
T08307
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121455734 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
morg03019
]
121455734 (Ttc37)
Messenger RNA biogenesis [BR:
morg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
121455734 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_11
ARM_TT21_C
TPR_9
ARM_TT21_2nd
Sel1
ANAPC3
Fis1_TPR_C
TPR_15
BTAD
Sey1_3HB
TPR_30
Retrotran_gag_2
TPR_20
Motif
Other DBs
NCBI-GeneID:
121455734
NCBI-ProteinID:
XP_041519322
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKATELEPEQLLAWQGLASLYEKCDHENAKGDLPGVYQKLLDLYESVDKQKWCDVCR
KLVDLHHQEKRYLEVARTWSKLIKTRQDDGADKQELYELWRKLTQMLAEEIEDQDNETQQ
MLWMAFENALDLADSIPSEEHQGLYQRFLQCLSKFPHETTRLKKACEGMINIYPTEQYPL
EVICLYLIESGSLTDEGQQYCCKLVEMNSKSGPGLIGLGVKALQDKKYEDAVNHLTEGLT
ESPLCITGWYHLAEAQAKVHRPKEAILSCNQALKNIDDHGAAGGRHHQKNFCLLLKAEAL
LKLSDCESSEEAIRILDQVSDADNTPRLLVLQGQAHLNTGAVDKSAKIMEDLKASYPGLA
EVHALEGLIHFSKKDYLQAEACFQRALEKDSEIAEYHYQLGLTYWFMGEETRKDKAKALA
HFLKAARLDTYMGKVFCYLGHYYRLVAGDRSRARGCYRKAFELDGSDAESGAAAVDLSVE
LEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLRAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFTRASELNPDSTYSVFKVAAIQQILGRYAEAVAQYQLIIE
KKEDYVPALKGLGECYLMMAKAALADFLDGKAVDYVEKALEYFTGALQHRADVSCLWKLA
GDACTSLHAVSPSKVHVHVLGVLLGQQGGREVLQKDELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNSTDGLTELLEKSVHCLKKAVRLDSNNHLYWNALGVIACHRGI
GNYALAQHCFIKSIQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AVPAAQGVLCKYVERIQNYAPAFTMLGYLNEHLQLRREAAEAYQRAAALLHPTEDQDTYT
VTVRNWGRLLCSIGEYDRAVQAFESTPLEELEDIIGFALALFMKGRYKESNKAYERALTV
VKSEQDKAHVLTAMAITEYKQGQMDAAKSLLFKCSILKEPTIESLQALCALGLAMQDATL
SKAALNELLKHVRHKQDYHRCLLTAAVCALQGRSVAVQRQAAKAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGLVAHILDSNHGKKALLYTALNQLAMGSSSAEDGKNVSLKTIQK
AAFLSPDDPAVWAGLMASCHADDKLALVSNTQPKRANLHLAQLSAVSIALKDKDILQNYN
QSLEKWCLSQAVTGLIDTGRISEAESLCTKNLKGNPDQPAVILLLRQVQCKSLLESQKPL
PDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLS
SLLKLALLALDVCMANVSGDHWSSLLQEATSEALKVCFSPLAVFLQALLQFNRKMGARET
RRLLERVVYQSGYPNSIVSTARWYLLRHLYAKNDQELIDVLVKNAETHSDKRTLELNEKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagaagtgaagactgccctgaagagtgcacgagacgcaatcagaaacaaa
gagtacaaagaagctttgaaacattgcaagacagtgctaaaacaagaaaaaaacaactat
aatgcctgggtcttcattggtgttgctgcggctgaactagaacagcccgaccaggctcag
ggtgcctataaaaaggctaccgaactagagccagagcagctgcttgcttggcaggggcta
gcaagtttgtatgagaagtgtgatcatgaaaatgctaagggtgatttacctggggtttac
caaaagctgttggatctctatgaaagtgttgacaagcagaagtggtgtgatgtctgtagg
aaactcgtggatctacatcaccaggaaaagagatacctagaggtggctcggacatggagt
aaactgataaagacacggcaagatgacggagcagacaagcaagagctttacgagctgtgg
agaaaactgactcagatgctcgctgaggagatagaggatcaggataatgaaacccagcag
atgctgtggatggcatttgagaacgcactggacttagcggacagcattcccagtgaagag
caccaagggctttatcagcgtttccttcagtgcttatctaaattccctcatgagacaact
aggttgaagaaggcctgtgaaggaatgataaatatctatcctactgaacaatatccacta
gaagtgatttgtttatacttgattgagtcagggagtctgacagatgagggacagcagtat
tgttgtaaactagtggaaatgaattcaaaaagtggtccaggcctcattggcttaggcgtt
aaagctttacaagacaagaagtatgaagatgctgttaatcacctaacggaaggcttgaca
gaaagccctctttgcataaccggctggtatcatctagcagaagcccaagccaaagtgcac
agacctaaggaagctattctttcttgcaaccaagcacttaagaacatagatgatcacggt
gcagcaggtggccgtcatcatcagaagaatttttgtcttcttctgaaagcagaggctttg
cttaaactctccgattgtgaatcttcagaggaagcaattcgcattctcgatcaggtttca
gatgcagataataccccacgactgctggttcttcaaggccaggctcatctgaacacaggc
gctgtagacaagtctgcgaagatcatggaagaccttaaagcttcttaccctggcctggcc
gaagtccacgcacttgagggcttgattcatttttctaagaaggactatctgcaagcagaa
gcatgtttccagagagcacttgagaaagactccgaaattgctgaatatcattatcagctt
gggttgacatactggttcatgggtgaagaaacaagaaaagataaagcaaaggctcttgcc
cattttctgaaggctgcaagactggacacatacatgggtaaagttttctgctatttaggt
cattattaccgccttgtcgctggagacagaagcagagctcgcggatgctacaggaaagcc
tttgaattagatggcagcgatgctgagtccggagcagcagccgtcgacctgagtgtggaa
cttgaagacacggaaactgctttggctatcttaacagcagtaactcaaaaggcaagtgcc
ggagcagcgaagtgggcctggctgaggcgaggcctgtaccatctgagagctggtcaacat
tctcaagccgtggccgatttgcaggcggcactaagggcagacccaaaggactgcaattgt
tgggaatccttgggagaagcgtacttgagcaggggaggctatacgacagccttgaagtct
ttcaccagagccagtgagctgaacccagactccacctacagtgtgtttaaagtggcagcc
atacagcagatcctaggcaggtatgcagaggccgttgctcagtatcagctgatcattgaa
aagaaagaggattatgtgccagccttgaaaggtttgggtgagtgctatctgatgatggcg
aaagcagccttagcggattttctggacggaaaggcggtagactatgtggaaaaagcgctg
gaatattttactggggcactgcaacatcgagctgatgtgtcctgcctctggaagctcgct
ggggatgcctgcaccagcctgcatgctgtttcaccatctaaagtgcatgttcatgtccta
ggagtcctcctcggtcagcagggaggaagagaagtactacagaaagatgagctcctgcat
cttggaggaaggtgttatggtcgtgcattaaagttgatgtctacatctaatacatggtgt
gatcttggaattaattattaccgccaagcacagcatctagcagagacaggcaacagcacg
gatggtcttacagagctactggagaaatctgtgcattgtctgaaaaaggctgtgagactg
gacagcaataatcacttatactggaatgctcttggtgtgattgcatgtcaccgtggtatt
ggaaattatgcccttgctcagcactgttttatcaaatcaatccaggcagaacaaattaat
gctgctgcctggaccaacttaggcgtgctctacctcgcaactgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccgtcttatctactgtgctggattgga
caagctcttattgcagagacagttggaagttatgacaccatggatctcttcagacacact
acagagctcagtatgcatactgaaggagccataggttatgcatattgggtttgtacaaca
ttacaagacaaaagcaacagagaaacggagctctacaggtataacatcctccagatgaac
gctgtccctgcagcacagggtgttctgtgtaaatacgtggaaaggattcagaattatgct
ccagctttcacgatgttgggttatttaaacgaacatctgcagctgagaagagaagccgca
gaggcgtaccaaagggcggctgctctgttacatcccacagaagaccaagacacttacact
gttacagtgagaaactggggcagattgctatgctccattggtgaatatgacagagctgtg
caagcctttgagtcgacgccccttgaggaactagaggacatcatagggtttgcattggcc
ttgtttatgaagggacggtataaggagagcaacaaagcctatgagagagccttgaccgtt
gtgaaatcagagcaagacaaagctcatgtcttgacagccatggcaataacagaatacaaa
caaggacaaatggatgcagccaagtcattgcttttcaaatgctctattttaaaggaacca
accatcgaaagcctgcaagccctgtgtgccctagggttggcaatgcaggatgccacactg
tcgaaagcagctcttaatgagttactgaagcacgtcagacacaagcaggattaccacagg
tgccttctcacggcggcagtgtgtgcactgcagggccgcagcgtggctgtgcaaagacag
gccgctaaggctgtccacagtaacccagctgacccggctctttggtctttgctgtctcga
gttgttgctcagtacactcaacggaatgcaaagggaggtgctgtagctggactcgtggct
catattctggattcaaatcatggaaagaaggcgttattgtatactgcgttaaaccagttg
gccatgggaagcagttcagcagaagacggaaaaaatgtttctctaaagaccattcagaag
gcagctttcctttctccagatgaccctgctgtctgggctggactgatggcatcctgccat
gctgatgacaaactggccttggtcagcaacactcagccaaagagggccaatttgcacttg
gcacagctgtctgctgtttctatcgcacttaaggacaaagacattttgcagaattacaac
cagtcacttgaaaagtggtgtctctcccaagctgtcactggtctaattgacacaggaaga
atatctgaagctgaatctctgtgcacaaagaatttaaaaggcaaccctgatcagccagct
gttatcttgctgttgagacaagtgcagtgtaaatcactcctggagtctcagaagcccctc
ccagatgctgtactggaagaactgcaaaaaacagtcatgtccaactccacctctgttccg
gcctggcagtggctggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgctacagaaagagtctacaagtggcatcccaacagggcagctggagtgggaagctctcg
agtctgttgaagctggcactgcttgcattggatgtgtgcatggctaatgtttctggtgat
cactggtcgtccttgcttcaagaagccacaagtgaggccttgaaagtttgcttctctccg
ctggctgtcttcttgcaagctttgttacagttcaaccgtaagatgggagcaagagagacg
cggcgactcttggagagagtagtgtaccagtctggctatcccaactcaattgtatcaacg
gcacgttggtacctcttaagacacctctatgcgaaaaatgaccaggagctcattgatgtg
ttggtgaagaatgctgaaacccacagtgataaaaggacactggaactgaatgagaagctg
tcatcacagtaa
DBGET
integrated database retrieval system
