KEGG   Mycobacterium ostraviense: LTS72_16940
Entry
LTS72_16940       CDS       T07946                                 
Symbol
nrdE
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
mot  Mycobacterium ostraviense
Pathway
mot00230  Purine metabolism
mot00240  Pyrimidine metabolism
mot01100  Metabolic pathways
mot01232  Nucleotide metabolism
Module
mot_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
mot_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:mot00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    LTS72_16940 (nrdE)
   00240 Pyrimidine metabolism
    LTS72_16940 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mot03400]
    LTS72_16940 (nrdE)
Enzymes [BR:mot01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     LTS72_16940 (nrdE)
DNA repair and recombination proteins [BR:mot03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    LTS72_16940 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN LAGLIDADG_3 Hint_2 PT-HINT Intein_splicing Hint Hom_end_hint
Other DBs
NCBI-ProteinID: UGT90070
LinkDB
Position
complement(3763560..3766982)
AA seq 1140 aa
MSPTVTAEPVTSGAHSHHLSGGQAELDYHALNAMLNLYDADGKIQFDKDVLAARQYFLQH
VNQNTVFFHNQDEKLDYLIRENYYEREVLDQYSRNFVKSLLDRAYAKKFRFPTFLGAFKY
YTSYTLKTFDGKRYLERFEDRVVMVSLTLAGGDTTLAEQLVDEIIEGRFQPATPTFLNSG
KKQRGEPVSCFPAGTPVDTPDGPKAIETLQVGDRVLSHDGSFAAVEAVVENPNDQALISI
SHFGHREPILCTPEHPILVWTTRDVQTLIDGDGADPFNGFVWLAAKDIRPSDFIVTAAPV
EGRTRRVYDLMEHAGAGEYEEVDGLIRKVNSDRKHRNKQRHHMSFVSVNRYVEESYDLGL
VLGWYLAEGHISKRSGPADRTPNGIHFTVGTHELDYQQELAAAFKRVFAADLAIHQSVSD
QSVRMICNSKVVASLFLSLVGTGYRSKRLSHDVLTADDEFQRGLLAGLFRGDGCSTSGGM
VLDLGPEFDLGPELIDQVQLLLRRIGIVSRIRQYVNRAGNVTGQVFVPGLPGANEEFIFD
VGKNLHNYIGQKGSSRTTYQVVHGRHVYGIRELRRTQEAPTKVYNLHVEKTHTYTIRGTV
VHNCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLTNIREHGAPIKNIENQSSGVIPI
MKLLEDSFSYANQLGARQGAGAVYLHAHHPDIYRFLDTKRENADEKIRIKTLSLGVVIPD
ITFELAKRNDDMYLFSPYDVERVYGVPFADISVTEKYYEMVDNPRIRKTKIKAREFFQTL
AELQFESGYPYIMFEDTVNRANPIEGKITHSNLCSEILQVSTPSYFNEDLSYAKVGKDIS
CNLGSLNVAKTMDSPNFAQTIEVAIRALTAVSDQTHITSVPSIEQGNNDSHAIGLGQMNL
HGYLARERIFYGSEEGIDFTNIYFYTVLYHALRASNRIAIERGTHFKGFERSKYASGEFF
DKYTEQIWEPKTEKVRRLFADADIHIPTQDDWRRLKESVQAHGIYNQNLQAVPPTGSISY
INHSTSSIHPIVSKVEIRKEGKIGRVYYPAPYMTNDNLEYYQDAYEIGYEKIIDTYAAAT
QHVDQGLSLTLFFMDTATTRDVNKAQIYAWRKGVKTLYYIRLRQMALEGTEVEGCVSCML
NT seq 3423 nt   +upstreamnt  +downstreamnt
gtgtcaccaaccgtcactgcagagcctgtaacctccggcgcgcactcgcaccacctttcg
gggggccaggcggaactggattatcacgcgctgaacgcgatgctgaacctgtacgacgcg
gacggcaagatccagttcgacaaggacgtgctcgcggcgcgccagtacttcctgcagcac
gtcaaccagaacaccgtcttcttccacaaccaggacgagaagctcgactacctgatccgc
gagaactattacgagcgtgaggttctcgaccagtactcgcgtaacttcgttaagtcgctg
ctggaccgtgcctacgccaagaagttccggttcccgacgtttttgggcgccttcaagtac
tacacctcctacaccctgaagactttcgacgggaagcggtatctggagcgcttcgaggac
cgggtggtcatggtttcgctcacgttggcgggcggtgacaccacgctggccgagcagctg
gtcgacgagatcatcgaaggccggttccagccggccaccccgacgtttttgaactcgggc
aagaaacagcgcggcgagccggtgagctgcttcccggccggaaccccggtggataccccc
gacggccctaaggcaatcgaaactctacaggtgggcgaccgggtgctctcgcacgacggg
tccttcgccgccgtcgaagccgtcgtcgagaaccccaatgaccaagcactcatttcgatc
tcgcacttcggacaccgggaaccgatcctgtgcacccccgagcatccgatcctggtgtgg
accacgcgcgatgtgcagacacttatcgacggtgacggcgcggaccccttcaacggcttc
gtgtggttggctgccaaagacattcgtccttcggacttcatcgtgacggcagcgccggtg
gaggggcggacgcgacgggtctacgacctgatggaacacgccggcgcgggcgaatacgaa
gaggtcgatgggctcatacgtaaggtcaactctgatcggaagcaccgcaacaagcagcgc
caccatatgagcttcgtatcggtgaatcgctacgtcgaagagtcgtacgatcttggcctc
gtccttggctggtacctcgccgaaggtcatatctccaagcgatcgggacccgcggaccga
acgcccaatggcatccacttcacggtcggcacacacgaactcgactaccagcaggagttg
gcggcggcattcaagcgagtgtttgccgcggacctcgccatacaccagagtgtttcggac
cagtcggttcgcatgatttgcaacagcaaggtcgttgcgtcgttgttcctctccctggtg
ggcacgggatatcggtcgaagcggttgtcccacgacgtcttaacggcggatgacgagttt
cagcgtggattgcttgccggactgtttcgcggcgacggctgcagtaccagcggcggcatg
gtgctcgaccttggcccggagtttgacctgggcccggaactgattgatcaggtgcagctt
cttttgcgccgaatcgggattgtctccaggatccgccagtacgttaaccgggcaggcaac
gtgacgggacaggtgttcgtgcccgggctgcccggcgccaacgaagagttcatcttcgac
gtcggcaagaacctgcacaactatatcggccagaaagggtcgtcgcgcacgacctatcag
gttgtgcatgggcggcacgtgtacgggatccgtgagttgcggcgcacgcaggaagcccca
acgaaggtctacaatctccacgtcgaaaaaacgcacacgtacacgattcgcggcactgtc
gtgcacaattgcttcctgcttcgcatcgaggacaacatggagtcgatcgggcgatcgatc
aactccgcactgcagctgtccaagcgcggcggtggagttgcgttgctgctgaccaacatt
cgcgagcacggtgcgccgatcaagaacatcgagaaccagagctcgggcgtcatcccgatc
atgaagctgctcgaggattcgttctcttatgccaaccagctgggcgcgcgccagggcgcc
ggcgcggtgtacctgcatgcgcatcaccccgacatctaccgcttcctggacaccaagcgg
gaaaacgccgacgagaagatccgcatcaagacgctgagcctgggcgtggtgattcccgac
atcaccttcgagttggccaagcgcaacgacgacatgtacctgttctctccctacgacgtc
gagcgggtctacggggtgccgttcgccgacatctcggtcaccgagaagtactacgagatg
gtcgataacccgcggatccgtaagaccaagatcaaggcgcgggagttcttccagacgttg
gccgagttgcagttcgagtccggctacccctacatcatgttcgaggacacggtgaaccgg
gccaaccccatcgagggcaagatcacccactcgaacctgtgctcggagatcctgcaggtg
tccacaccgtcgtacttcaacgaagacttgtcctatgccaaagtgggcaaagatatttcg
tgcaacctggggtcgctgaacgtcgccaagacgatggactcgccgaacttcgcccagacc
atcgaggtggccatccgtgcgctgaccgcggtcagcgaccagacgcatatcacgtcggta
ccctcaattgagcagggcaacaacgactcccacgcaatcgggttgggtcagatgaacctg
cacggctacctggcgcgggagcgcattttctacgggtccgaggagggcatcgacttcacc
aacatctacttctacacggtgctgtatcacgcgctgcgcgcgtcgaatcggatcgcgatc
gaaagaggcacgcacttcaagggtttcgagcggtccaagtacgcgtcgggggagttcttc
gacaagtacaccgagcagatttgggagccgaaaaccgagaaggtgcgccggctattcgcc
gacgccgacattcacatccctactcaggacgactggcggcggctcaaggaatcggtgcag
gcgcacggcatctacaaccagaacctgcaggcggtgccacccaccgggtcgatttcctac
atcaaccactcgacgtcgtcgatccacccgatcgtgtccaaggtcgagatccgcaaggaa
ggcaagatcggccgggtctactacccggcgccgtatatgaccaacgacaacctggagtac
taccaggacgcctacgagatcggctacgaaaagatcatcgacacctatgccgcggcgact
cagcatgtggatcaaggactttcgctgacgctgttcttcatggacaccgctaccacccgt
gacgtgaacaaggcgcagatctacgcctggcgcaagggggtcaagacgctctactacatc
cggctgcggcagatggccctggaaggaaccgaagtggaagggtgcgtgtcctgcatgctc
tag

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