Moraxella sp. DOX410: RNZ41_08100
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Entry
RNZ41_08100 CDS
T10479
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mow Moraxella sp. DOX410
Pathway
mow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RNZ41_08100 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mow03021
]
RNZ41_08100 (rpoB)
03400 DNA repair and recombination proteins [BR:
mow03400
]
RNZ41_08100 (rpoB)
Enzymes [BR:
mow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RNZ41_08100 (rpoB)
Transcription machinery [BR:
mow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RNZ41_08100 (rpoB)
DNA repair and recombination proteins [BR:
mow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RNZ41_08100 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
WNP27044
LinkDB
All DBs
Position
complement(1820388..1824506)
Genome browser
AA seq
1372 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKLPTVMDVPYLLAIQVDSYEQFLQENKKPKGRENIGLQAAFNSI
FPIESHTGNAELQFVEYYLGTPEFDVRECILRGSTYAAPLRVKIRLVIKDKDVKDKDAKA
AIKDIREQSVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKVLY
NARIIPYRGSWLDFEFDAKDLVFARIDRRRKLLATVILHAIGMNTQQILDAFYEKTHVYK
GDEQFEIDLVTDRLRGEMAQFEIVSPDGEVIVEQGKRINARAIRKIEQAGMTKLPVPDEY
LYERILAHDIVVDDEVIARANQLLDHETLVKISNNGIKEFDILFTNDIDHGSYIADTLRA
DTAMSREEALIEIYKVMRPGEPPTLDTAEKLFESMFFNADRYDLSNVGRMKFNRRLGRVY
EPTNDPDVQRERSVLTNEDIIDVLKMLIEIRDGRGVVDDIDHLGNRRVRSVGEMTENQFR
VGLVRVERAVKERLSSAETDNLSPQDLINSKPVAAAIKEFFGSSQLSQFMDQNNPLSEIT
HKRRVSALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLAVYAKTNEFG
FLETPYRKVVDGKVTDEIEYLSAIEEVGTVIAQADSPIDQSGQLTEDYVSVRNYGEFVRM
APEKVTHMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSDKPLVGTGME
RHVARDSGVCVTAKRGGVIMDVDASRVVVKVNEDEMQAGEAGIDIYNLIKYTRSNQNTCI
NQRIIVNQGDVIARGDILADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILLSERVVKE
DRFTTIHIQELTCVARDTKLGTEEITGDIPNVGEAALANLDEAGIVYIGAEVQGGDILVG
KVTPKGETQLTPEEKLLRAIFGEKAADVKDTSLRVPSSTKGTVIDVQVFTRDGVEKDSRA
QAIEKAQLDSYRKDLKEELRIFENAARGRIISLLDGQTVSGGAGLKSGTVLSEDSMQDMS
LETLLDIQPTQEDTAERLSQIGDFLTDKQKEIDEKFTEKKRKLTAGDDLTHGVQKIVKVY
LAVKRRIQPGDKMAGRHGNKGVVSRIMPIEDMPYDENGNPVDVVLNPLGVPSRMNVGQIL
ETHLGGAARGLGIKIDEMIKQQAAVAELRDFLDKIYNQIGGEQVDLGSISDEEIIAMSKN
LRAGVPMGTAVFDGAKEQQIKGLLELAGMPTSGQQVLFDGRTGQQFDRPVTVGYMYMLKL
NHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKS
DDVEGRTRMYKNIVDGEQNMSAGMPESFNVLTKEIKSLGINIELKDHSKSKN
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcgtatactgaaaaaaaacgcattcgtaaaagttttgcaaagttgcccacc
gtcatggatgtgccatacttattggccatccaagttgactcgtatgagcaatttttgcaa
gaaaataaaaagccaaaaggtcgggaaaacattggtttacaagccgcttttaattctatt
ttccctattgaaagccatactggcaatgccgagctacaatttgttgaatactatctaggt
acaccagagtttgatgtgcgcgaatgtattttacgtggttcaacctatgcagcgccatta
cgtgtcaaaatccgtttggtcatcaaagacaaagatgttaaagacaaagatgctaaagcg
gcaattaaagatatccgtgaacaaagcgtctatatgggcgaaatcccattgatgacggaa
aacggtacctttgtgattaatggtactgagcgcgtcatcgtatcgcaattacaccgttca
ccaggcgtattctttgaccatgacaaaggcaaatcacattcaagtggtaaagtgctgtat
aacgcccgtattattccttaccgtggttcatggttagactttgaatttgatgccaaagac
ttggtatttgctcgtattgaccgccgccgtaaattattggcaacggtgattttgcatgcc
attggaatgaatacacagcaaattttagatgcgttttatgaaaaaacccacgtgtataag
ggtgatgagcaatttgaaatcgatcttgtcactgaccgtttacgcggtgaaatggcgcag
tttgaaatcgtttcaccggatggcgaagtgattgtcgaacagggcaaacgtatcaacgcg
cgcgcgattcgtaaaatcgaacaagccggtatgactaaattacctgtgcctgatgaatac
ttgtatgagcgtattttggcgcacgatatcgtggtggatgatgaagttattgcacgcgct
aaccaattgctcgatcacgagactttggtcaaaatcagcaataacggtattaaagaattt
gatattttattcactaacgatatcgatcatggttcatatatcgccgatacactgcgcgcg
gatacggcgatgagccgtgaagaagcgttgattgaaatctacaaagtgatgcgtccaggt
gagccaccaacacttgatacagctgaaaaactgtttgaatcgatgttttttaacgcggat
cgctatgatttatcaaatgtcggtcgcatgaagttcaaccgtcgtttgggccgggtctat
gagccaaccaatgaccctgatgtgcagcgtgaacgcagtgtattgaccaacgaagacatt
atcgacgtattaaaaatgttgattgaaattcgtgatggtcgtggggtagtggacgatatt
gaccatttaggtaaccgccgtgtccgttcagtcggtgagatgacagaaaatcaatttcgc
gtgggtttagtccgtgttgagcgtgctgtcaaagagcgtctaagctcagctgaaacagat
aacttatcgccacaagatttaatcaactcaaaacctgtggcagccgccattaaagagttc
tttggttcatcacaattgtcacagttcatggaccaaaacaacccattgtcagagatcacc
cataagcgtcgtgtttctgccttaggtccaggtggtttaacacgtgaacgtgcaggcttt
gaagtccgtgacgtacaccaaacccattacggtcgtgtgtgtccgattgaaacccctgag
ggtccaaacatcggtctgattaattctctagccgtctacgctaaaaccaatgaatttggt
tttttagagactccgtatcgtaaagtagttgacggtaaagtgacggatgaaatcgaatat
ctatcagcgattgaagaagtaggcactgtgattgcacaagcggattcgccgattgaccaa
agcggtcagttgacagaggattatgtctctgtgcgtaactatggcgaatttgtacggatg
gcaccagagaaagtgacccatatggacgtatcaccacgtcaggttgtgtctgtggcagcc
agtttgattccattcttggaacatgacgatgccaaccgtgccttgatgggttcaaacatg
cagcgccaagcggtacccactttacgttctgacaaaccactggttggtactggtatggag
cgtcacgttgcccgtgattcaggtgtgtgtgtgactgccaaacgtggcggcgtcattatg
gacgtggatgcgagccgtgtcgttgtaaaagtgaatgaagatgaaatgcaagcgggcgaa
gcaggtattgatatctacaacttaatcaaatacacccgttcaaaccaaaatacctgtatt
aaccaacgcattatcgtcaaccaaggtgatgtcattgcgcgtggggatatcttggcagat
ggtccatcaaccgatttgggtgagttggcattgggtcaaaacatgcgtgtggcgttcatg
ccttggaacggttacaacttcgaagactcgattttgttatctgagcgtgtggttaaagaa
gatcgttttaccaccatccacatccaagaattgacctgtgtggcgcgtgataccaaattg
ggtacggaagaaatcactggcgatattccaaacgtgggcgaggcagccctagctaatttg
gatgaagcaggtatcgtctatattggtgcagaagtacaaggtggcgatatcttagtaggt
aaagtgacaccaaaaggtgaaacgcagctcacccctgaagaaaaactacttcgtgcaatt
tttggtgaaaaagccgcggacgttaaagatacgtcgttgcgagtgccttcttctaccaaa
ggtacggtgattgacgtccaagtctttacccgtgatggtgtagaaaaagacagccgtgcg
caagctatcgaaaaagcccagcttgatagctatcgtaaagacttaaaagaagaattgcgt
atctttgaaaacgccgcacgcggtcgcattatttcattgcttgacggtcagactgtcagt
ggtggcgcgggcttaaaatcaggtacggtattgagtgaagactcaatgcaagacatgtca
cttgaaacattgctggatattcagccaacccaagaagataccgcagagcgtttatcacaa
attggtgactttttaaccgataaacaaaaagaaatcgatgaaaaattcactgagaaaaaa
cgcaaattaacggcaggtgatgacttaacgcatggtgtgcaaaaaatcgtcaaagtgtat
ttggcagtaaaacgtcgtattcagccaggtgacaaaatggcgggtcgtcatggtaacaaa
ggggtggtatcacgtatcatgccgattgaagacatgccatatgatgaaaacggcaaccca
gtggatgtggtactaaacccactcggtgtaccatcgcggatgaacgtcggtcagattcta
gaaactcacttaggcggtgcagcacgtggtttgggcatcaagattgatgagatgatcaaa
caacaagcggcagttgctgagttacgtgatttcttagacaaaatttataaccaaattggc
ggcgagcaagtggatttaggcagcatcagtgatgaagaaatcattgccatgtcaaaaaat
ctacgtgcaggcgtaccaatgggtaccgcagtatttgatggcgctaaagaacagcaaatc
aaaggcttgctagaattagcgggtatgccaacctcaggtcagcaagtattgtttgatggt
cgtaccggtcaacagtttgatcgtcctgtgaccgtgggttatatgtacatgctcaaactc
aaccacttggttgatgacaaaatgcacgcacgttcaacgggttcttactcactggttacc
cagcagccattgggtggtaaagcccagtttggtggtcagcgcttcggtgagatggaagtt
tgggcacttgaagcttacggtgctgcttatacattgcaagagatgttgacggtgaaatcc
gatgacgtcgaaggtcgtacccgtatgtataaaaacatcgttgatggtgaacagaacatg
tcagccggtatgccagaatcgttcaacgtattgaccaaagagattaagtcattgggtatc
aatattgagttaaaagatcatagcaaaagtaaaaactaa
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