Mycobacterium paragordonae: C0J29_06040
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Entry
C0J29_06040 CDS
T06847
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpag
Mycobacterium paragordonae
Pathway
mpag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C0J29_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpag03021
]
C0J29_06040
03400 DNA repair and recombination proteins [BR:
mpag03400
]
C0J29_06040
Enzymes [BR:
mpag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C0J29_06040
Transcription machinery [BR:
mpag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C0J29_06040
DNA repair and recombination proteins [BR:
mpag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C0J29_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AYE94420
UniProt:
A0A386U1J4
LinkDB
All DBs
Position
1278934..1279977
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEDILTDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PSMHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPSFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcggcccaccctgtccgaggacatcctcaccgacagccggtcccag
ttcgtcatcgaaccgctggagccgggattcggttacacccttggcaattcgctgcgtcgc
acgctgctgtcgtcgatccccggcgcggccgtcaccagcatccgcatcgacggcgtcctg
cacgagttcaccaccgtgcccggcgtcaaggaagatgtcactgacatcatcctgaacctc
aagagcctggtggtgtcctccgaggaggatgagccggtcaccatgtacctgcgtaagcag
ggcccgggtgaggtcaccgcgggtgacatcgtgccgccggccggtgtcaccgtgcacaac
ccgtcgatgcacatcgcgaccctgaacgacaagggcaagctcgaggtcgagcttgtcgtc
gagcgcggccgtggctacgttccggcggtgcagaaccgggcctcgggtgccgaaatcggt
cgcatcccggtcgattccatctactcgccggttctcaaggtgacctacaaggtcgacgcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctggacgtggagaccaagagc
tcgatcaccccgcgcgacgcgctggcttctgccggcaagacgctggtcgaattgttcggt
ctggcacgcgaactcaacgtcgaagccgagggcatcgagatcgggccgtcaccggccgag
gcggaccacatcgcctcgttcgcgctccccatcgacgacctggacctgacggtgcggtcg
tacaactgcctcaagcgcgagggcgtgcacacggtcggcgagctggtctcgcgcaccgag
tccgacctgctggacatccgcaacttcgggcagaagtcgatcgacgaggtgaaggtcaag
ctgcaccagctgggtctgtcgctcaaggacagcccgccgagcttcgacccgtccgaagtc
gccggctacgacgtcgccaccggcacctggtccaccgagggcgcctacgacgaccaggac
tacgcggaaaccgaacagctctaa
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