Mus pahari (shrew mouse): 110312905
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Entry
110312905 CDS
T05929
Symbol
Lnx2
Name
(RefSeq) ligand of Numb protein X 2
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110312905 (Lnx2)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110312905 (Lnx2)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110312905 (Lnx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-rbx1
zf-Nse
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110312905
NCBI-ProteinID:
XP_021042513
Ensembl:
MGP_PahariEiJ_G0024599
LinkDB
All DBs
Position
23:complement(37090128..37150922)
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AA seq
692 aa
AA seq
DB search
MGTTSDEMVPVEQASSASSLDPLCFECGQQHWARENHLYNYQGEVDDDLMCHICLQPLLQ
PLDTPCGHTFCHKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSV
CQDVMQRCDLEAHLKNRCPGASHRRVDLERRKTSQTQTQIEGETGSTVIDPPGTSPPEMD
CSGTVPGERNLTPAPLPVWTEEPGLDNPAFEESAAADSVQQPLSLPEGEITTIEIHRSNP
YIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRLLAGDQILQVNNYDISNVSHNHARA
VLSQPCSTLQLTVLRERRFGSRANSHADGSAPRDEVFQVVLHKRDSAEQLGIKLVRRTDE
PGVFILDLLEGGLAAQDGRLNSNDRVLAINGHDLKHGTPELAAQIIQASGERVNLTIARP
GKPQPSNGSREAGAHSSSSSSSSSHAQPPSHSRPGSHKDLTRCVTCQEKHITVKKEPHES
LGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDILLNINGIDLTNLSHSEAVAM
LKASAASPAVILKALEVQIAEEAAQATEEQPSAFSENEYDASWSPSWVMWLGLPSALHSC
HDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLS
TVGMSHSALVPMLKEQRNKVTLTVICWPGSLV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgggaacaaccagtgacgagatggtgccggtggagcaggcctcctcagcctcctcccta
gatcccctatgcttcgagtgcggccagcagcactgggcgagagaaaaccacctgtacaac
taccagggggaggtggacgacgacctcatgtgccacatttgcctccagcccctgctccag
ccgctcgacacgccctgcggacacacgttctgccacaagtgcctcagaaacttcctgcag
gagaaggatttctgtccgctggaccgcaagcggcttcatttcaagttgtgtaagaagtct
agcatcctggtccataagcttctggacaaactgctggtcctgtgtcctttttcctccgtg
tgccaagatgtgatgcagcgctgtgacctagaggcacatcttaaaaacaggtgtcctgga
gcctctcaccggagagtcgatctagagagaaggaaaacgagtcaaactcaaacacagatt
gagggtgaaactggatccactgtcatagatcctccaggcacctcacccccagaaatggac
tgctcgggcactgtgcccggagagaggaacttgacaccggcacctcttcctgtgtggacc
gaggagcctggcctggacaaccccgccttcgaggagagcgccgcagctgactctgtacag
cagccgcttagtttaccagaaggagagatcaccaccattgagatccaccgctctaacccg
tacatccagttaggaatcagcatcgtgggcggcaacgagacgccactgatcaacatcgtc
attcaggaagtctaccgggacggggtcatcgccagagatggaaggctcctggccggagac
cagattcttcaggtcaacaactacgacatcagcaacgtgtcccacaaccacgcccgggcc
gtgctgtcccagccctgcagcacgctgcagctgacagtgctgcgggagaggcgcttcggc
agccgtgccaacagccacgcagacggcagcgcgcctcgggacgaggtcttccaggtggtg
ctccacaagcgcgactcggctgagcagctcggcattaaactagtccgaaggacagatgag
ccaggcgtcttcattctcgacctcctggaaggggggctggcagcgcaggacggcaggctc
aacagcaacgaccgggtgctggccatcaacgggcacgacctgaagcatgggaccccagag
ctcgctgcccagattattcaggccagcggagagagggtgaacttaacaattgccagacca
gggaagccccagcccagcaatggcagccgtgaggccggagcacacagcagcagcagcagc
agcagcagcagccacgctcagccaccctcgcacagccgaccgggctcacacaaggacctc
acccggtgtgtcacatgtcaggagaagcacatcactgtaaagaaggagccccatgagtcc
ctcgggatgacggttgctgggggcagagggagcaagagtggtgagctgcccatctttgtg
accagcgtgccgccccacggctgcctcgctcgagatggcaggatcaagagaggtgacata
ttgctgaacatcaacggcattgacctgaccaacttaagccacagcgaggctgtggccatg
ctgaaagccagcgctgcgtctccagctgtcatcctgaaggccctggaagtgcagatcgcc
gaggaagcagcacaggccaccgaggagcagccgagcgccttcagtgagaatgagtatgac
gccagctggtccccgtcctgggtcatgtggctcgggctgccaagtgcccttcacagctgt
cacgacatagtcttacgaagaagctacctgggaagctggggcttcagcatcgtgggcgga
tacgaagagaaccacaccaatcagcccttcttcattaagaccatcgtcttaggaacccct
gcttactacgatggaagattgaagtgtggagacatgatcgtagccgtaaatggcctgtca
actgtgggcatgagtcactctgctctggtgcccatgttgaaagaacagaggaacaaggtc
actttgacggtcatctgctggccaggcagcctcgtatag
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