KEGG   Mus pahari (shrew mouse): 110316020
Entry
110316020         CDS       T05929                                 
Symbol
Capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04141  Protein processing in endoplasmic reticulum
mpah04210  Apoptosis
mpah04217  Necroptosis
mpah04218  Cellular senescence
mpah04382  Cornified envelope formation
mpah05010  Alzheimer disease
mpah05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110316020 (Capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110316020 (Capn1)
   04217 Necroptosis
    110316020 (Capn1)
   04218 Cellular senescence
    110316020 (Capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110316020 (Capn1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110316020 (Capn1)
   05022 Pathways of neurodegeneration - multiple diseases
    110316020 (Capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:mpah01002]
    110316020 (Capn1)
Enzymes [BR:mpah01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     110316020 (Capn1)
Peptidases and inhibitors [BR:mpah01002]
 Cysteine peptidases
  Family C2: calpain family
   110316020 (Capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 110316020
NCBI-ProteinID: XP_021045748
Ensembl: MGP_PahariEiJ_G0014076
LinkDB
Position
1:complement(117380149..117404778)
AA seq 713 aa
MAEELITPVYCTGVSAQVQKKRDKELGLGRHENAIKYLGQDYENLRARCLQSGVLFQDEA
FPPVSHSLGFKELGPHSSKTYGIKWKRPRELMSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETILHRVVPYGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGCTSEAFEDFTGGVTEWYDLQKAPSDLYQIILK
ALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTGAKQVTYQGQQVNLIRMRNPWGE
VEWKGPWSDSSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKS
RTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIQLEEVDDADDYDNRESGCSFL
LALMQKHRRRERRFGRDMETIGFAVYKVPRELAGQPVHLKRDFFLANASRAQSEHFINLR
EVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEE
EIDDNFKALFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG
NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIIT
RYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMFA
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcagaggagttaatcacacctgtgtattgcacgggggtgtcggcccaagtgcagaag
aagcgggacaaggagctgggcttgggccgccatgaaaacgccatcaagtacctgggccag
gattatgaaaatctgcgggcgagatgcctgcagagcggggtcctcttccaagacgaggcc
ttccctccggtttctcatagcctgggcttcaaggaactgggtccccattcctctaaaacc
tatggcatcaaatggaagcggcctagggaactgatgtcaaacccccagttcatcgtggat
ggagccacccggacagacatctgccagggagcactgggggactgttggcttctggctgcc
attgcctccctcaccctcaacgagactattctgcaccgagtggttccctacggccagagc
tttcaggacggctacgccggcatctttcatttccagctgtggcagtttggggagtgggta
gacgtggttgtggatgacttgctgcccaccaaggacgggaagctggtgttcgtgcactct
gcccagggcaatgagttctggagcgccctgcttgagaaagcctatgctaaagtgaatggc
agctatgaggccctttcgggaggctgtacctcagaggccttcgaggactttaccggtggg
gtcactgagtggtacgatctgcagaaggcccccagcgacctctaccagatcattctaaag
gccctggaacgaggctccctgctgggctgctccattaatatctccgatatccgtgattta
gaggctatcacttttaagaacctggtgaggggccatgcatactctgtgacaggcgccaag
caggtaacgtaccagggccagcaggtgaacctaatccggatgcggaacccatggggagaa
gtggagtggaaaggaccctggagtgacagctcctatgagtggaacaaagtggacccctat
gaacgagagcagctgagggtcaagatggaggatggggagttctggatgtccttccgagac
ttcatccgtgagttcaccaaactggaaatctgcaaccttacacccgatgcccttaagagc
agaaccctccggaattggaataccacattttacgagggcacctggcgtcggggaagcact
gctgggggctgcaggaactacccagctaccttctgggtaaacccccaattcaagatccag
ttggaggaggtggatgatgcagacgactatgacaaccgagaatcgggctgcagcttcttg
ttggccctcatgcagaagcaccgccgcagggagcgtcgctttggccgggacatggagacc
attggttttgcagtgtataaggtccctcgggagctggcgggtcagcctgtgcacttgaag
cgtgacttcttcctggccaacgcttctcgggcgcagtcagagcacttcatcaaccttcgg
gaagtcagtaaccgtatccgcctgccgcccggggagtatatagtggtgccctccaccttc
gagcccaacaaagagggcgacttcctgctgcgcttcttctcagagaagaaggctgggacc
caggaactagatgaccagattcaggccaacctccccgatgagaaagttctctctgaagag
gagatcgatgacaacttcaaggccttgttcagcaagttggcaggggatgacatggagatc
agtgtcaaggagttacagaccatcttgaacaggatcattagcaaacacaaagacctgcgc
actaacggcttcagcctggaatcgtgccgcagcatggtgaacctcatggatcgagatggc
aacgggaagctgggtctggtggagttcaacatcctgtggaaccgcatccgaaattacctg
accatcttccggaagtttgacctggacaagtccggcagcatgagtgcctatgagatgagg
atggccattgaggctgcaggcttcaagcttaacaagaagctacatgaactcattatcacc
cgctactcggagcctgacctggctgtggacttcgacaactttgtgtgctgccttgtgcgg
ctggagaccatgttccggtttttcaaaattctggacacagacctggatggtgttgtgacc
tttgatctatttaagtggctccagctgactatgtttgcctga

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