Mus pahari (shrew mouse): 110316975
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Entry
110316975 CDS
T05929
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110316975 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110316975 (Mbd4)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110316975 (Mbd4)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
110316975 (Mbd4)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110316975 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
110316975
NCBI-ProteinID:
XP_021046962
Ensembl:
MGP_PahariEiJ_G0022511
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All DBs
Position
2:complement(131544977..131555817)
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AA seq
567 aa
AA seq
DB search
MESPNLGDNRVPSVTAGESLVPDPPRDRCKEDVAVELGGVGEAGKDLVIISSECSSLLQE
PTASTLSSCTAATEEGHKPVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLAN
YLLKIGETFLKPEDFDFTVLSKGGINPGHKYQSLAALTSSKPNETDVSKQNLKTRNKRKT
DVLPLPSGNSESPDSSRLSNSNSTYLLLKEHRGIQDVDSEERRKPKRKVTVLKGIASQKT
KQKCGKSLLDSTRRNRKRAPAVQKVGAYSQLVPQESQLNRILCPADACARESGSLAGEEK
VLGQEKSPSPGPDLGLRQVTSGTTNKFHSTEAAGEANREQTFLESEEIRSKGDQNGEAHL
HTDILQDGSEMPSCSQAKKHFTSETFQEDSIPRTQVEKRKTSLYFSSKYNKEALSPPRRK
AFKKWTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVART
ADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEW
KQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaaaccttggggacaacagagtcccctccgtcaccgctggagagagccta
gttccagacccgcctcgggatcgctgcaaggaagatgttgctgttgaactgggaggagtg
ggagaagctggaaaggacctggtgataataagcagtgagtgcagctcccttctccaggag
cccactgcctctactctgtctagttgtactgcagcgacagaagaaggccacaagcctgtc
ccgtgtggatgggaaagagttgtgaagcaaaggttatctgggaaaactgcaggaaaattt
gatgtatattttatcagcccacaaggattgaagttcagatcaaaacgttcacttgctaat
tatcttctcaaaattggagagacttttcttaagcctgaagattttgattttactgtactg
tctaaagggggcatcaatccaggtcataaataccaaagtttggcagctctgacatcctcg
aagccaaatgaaactgacgtttcaaagcagaacctcaagacacgaaacaagaggaaaaca
gatgtgttgcctctgcccagtggtaattcagagtcgccagatagcagcagactgtctaac
tctaactctacttacttgctattgaaagaacataggggcattcaggatgttgactctgag
gagaggagaaagcccaaaagaaaggtgactgttttgaaaggaattgcaagtcagaaaacc
aaacaaaagtgcgggaagagtctcttagattccactagaagaaacagaaaaagagcacct
gcagttcagaaggtgggtgcctatagccagctggttccacaggaaagtcaactcaacaga
atcctctgccctgcagatgcctgtgcaagggagagtggcagcctggctggggaagaaaag
gtcctgggacaagaaaaatcaccaagcccaggaccggatcttggtctcagacaagtaact
tctggcacgacaaacaaattccattcaactgaagcagcaggtgaagcaaatcgtgagcag
acttttttagaatcagaggaaatcagatcgaagggagaccaaaatggggaggcacatttg
cataccgacatcttacaggatggctctgaaatgcccagctgctcacaagccaagaaacac
tttacttctgaaacatttcaagaagacagcatcccacggacacaagtagaaaaaaggaaa
acaagcctgtatttttccagcaagtacaacaaagaagctcttagccccccaagacgcaaa
gccttcaagaaatggacccctcctcggtcaccttttaatcttgttcaagaaatacttttc
cacgatccatggaaactcctcatcgcaactatatttctcaatcggacctcaggcaagatg
gccatccctgtgctgtgggagtttctggagaagtacccttcagctgaagtggcccgaact
gctgactggagggacgtgtcagagctgcttaagcctcttggtctctatgatctccgtgca
aaaaccattatcaagttctcagatgaatatctgacaaagcagtggaggtatccgattgag
cttcatgggattggtaaatatggcaatgactcctaccggatcttttgtgtcaatgaatgg
aagcaggtacaccctgaagaccacaagttaaataaataccatgactggctttgggaaaat
catgaaaaactaagtctatcttaa
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