Mus pahari (shrew mouse): 110318152
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Entry
110318152 CDS
T05929
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
110318152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110318152
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110318152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
ATP-synt_B
GPHH
IQ
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
110318152
NCBI-ProteinID:
XP_021048608
Ensembl:
MGP_PahariEiJ_G0025053
LinkDB
All DBs
Position
3:51843022..51971617
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFNNSL
DWNGTAFNRTMNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGKEDEGTPIKEDIITDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagaa
cgcaaggatgaagacgacgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggatccctactatatcaataagaaaacctttatagtattgaataaagggaaagcaatc
tctcggttcagtgccacctccgccctgtacattttaactcccttcaaccccattagaaaa
ttagctattaagattttggtacattctttattcaatgtgcttatcatgtgcacaattctt
acaaactgtgtatttatgaccatgagcaaccctccagactggacaaagaacgtggagtat
acttttacaggaatttatacttttgaatcacttattaaaatacttgcaaggggcttttgt
ctagaagatttcacatttctacgggatccctggaattggctggatttcacagtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacgttcaga
gttctccgagcattgaaaacaatatcagtcattccaggcctgaagaccatcgtgggggcc
ctgatccagtcagtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagt
gtgtttgcactcatcgggctgcagctcttcatgggcaacctgaggaataaatgcttgcag
tggcccccagacaattctacctttgaaataaatatcacttccttctttaataactcattg
gattggaatggtactgccttcaataggacaatgaacatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaaggacaaaacgacgctctgctttgtgggaac
agctcggatgctggccagtgtccggaaggatacatctgtgtgaaggctgggagaaacccc
aactatggctacacaagttttgacaccttcagctgggccttcttgtccttatttcgtctt
atgactcaagacttctgggaaaacctttatcagctgaccttgcgtgctgctgggaaaaca
tatatgatattttttgtgcttgtgattttcttgggctcattctacctaatcaatttgatc
ctggctgtggtggccatggcctatgaagaacagaaccaggccacgctggaggaggctgag
cagaaggaggctgagtttcagcagatgctagagcaacttaagaagcagcaggaggaagct
caggcggcagctgcagcagcgtctgcagaatccagagacttcagcggagcaggcgggata
ggtgttttctcggagagttcttctgtagcatcaaagttaagttccaagagtgagaaggag
ctgaaaaacagaagaaagaaaaagaaacagaaagagcaggctggagaggaagagaaggaa
gatgcagttcggaaatctgcctctgaagacagcatacgaaagaaaggcttccggttttcc
ctagaagggagtagactgacctacgagaagaggttttcctctccgcaccagtctctcttg
agcatccgaggctcccttttttctccgagacgcaacagcagagcaagccttttcagcttc
aaaggtcgggtgaaggatattggttctgaaaatgactttgcggacgatgaacacagcaca
tttgaggacaacgacagcaggagagactctctatttgtaccacatagacacggagaaagg
cgtcccagcaacgtcagccaggccagccgtgcctcccgagggatacccactctacccatg
aatgggaagatgcacagtgcagtggactgcaatggtgtggtctctctggttggaggccct
tctgcgctcacatctcctgtggggcagctgctgccagagggcacaactactgaaacagaa
ataaggaagaggaggtccagttcttaccatgtttctatggacttgttggaagaccctaca
tcaaggcaaagagcaatgagtatggccagcattttaaccaacactatggaagaacttgaa
gaatccagacagaaatgccctccctgttggtataaatttgctaatatgtgcctgatttgg
gactgttgtaagccatggctaaaggtaaaacacgttgtcaacctggtggtgatggatcca
ttcgttgacctggccattaccatctgcattgtgttaaatacgctcttcatggccatggag
cactaccccatgacggaacagtttagcagtgtgctgtctgttgggaatttggtcttcact
ggaatcttcacagcagaaatgtttctcaagataatcgctatggatccatattattacttc
caggaaggctggaatatctttgatggctttatagtgagccttagtttaatggaactcggc
ttggcgaatgtagaaggattgtcagttctccgatcattccgactgcttagagtcttcaag
ttggcaaagtcctggcccacactgaatatgcttattaagatcatcggcaattcagtgggt
gcactgggcaacctgaccctggttctggccatcatcgtcttcatttttgccgtggtcggc
atgcagctgtttggaaagagttacaaggagtgtgtctgcaagatttccaatgattgtgag
ctcccacgctggcacatgcatgacttcttccattccttcctgatcgtgttccgtgtacta
tgtggggagtggatagagaccatgtgggactgcatggaggtcgcaggccagaccatgtgt
cttactgtcttcatgatggtcatggtgattgggaaccttgtcgttctgaacctcttcttg
gccttgctcctcagttctttcagctcggacaacctggctgccacagatgacgataatgaa
atgaataacctccagatagccgtgggaaggatgcagaaggggattgattttgttaaaagg
aagatacgtgagttcattcagaaagcctttgtcagaaagcagaaagctttagatgaaatc
aaaccccttgaagatctgaataataagaaagacagttgtatctccaaccacacaaccata
gaaataggcaaggacctgaattaccttaaagatggaaacgggacgaccagtggcataggc
agcagcgtggagaagtacgtggtagatgagagtgactacatgtcgttcatcaacaacccc
agcctcactgtgaccgtgcccattgctgtgggagagtctgactttgaaaacttaaataca
gaagaattcagcagtgaatcagatatggaagaaagcaaggagaaattgaatgcaactagt
tcatccgagggcagtacggttgatataggcgctcctgcagagggagagcaaccagaggct
gaaccggaagagtcgcttgaaccagaagcctgtttcacagaagactgtgtgagaaagttc
aagtgctgtcagataagcatagaagagggaaaaggcaaactctggtggaacttgaggaaa
acgtgctacaagatagtagagcacaactggtttgaaaccttcatcgtcttcatgattctc
ctcagcagcggtgctctggcctttgaagacatttacatcgagcagcgaaagaccatcaag
accatgctggagtatgctgacaaggtcttcacttacatcttcatcctggagatgctgcta
aagtgggttgcatatggtttccaaatgtacttcaccaacgcctggtgctggctggacttc
ctgatcgttgatgtttcactggttagcttgactgcaaatgccttgggctattcagaactt
ggtgccatcaaatccctccgaacattaagagcactgaggcctctgagagccttatcccga
tttgaaggaatgagggttgttgtaaacgctcttctaggcgcgatcccatccataatgaac
gtacttctcgtctgcctgatcttttggctaatattcagtatcatgggggtgaatctcttt
gccggcaagttctatcattgcatcaactacaccaccggggaaatgtttgatgtgagcgtg
gtcaacaactacagtgagtgccaagctctcatagagagcaatcagacggccaggtggaag
aacgtgaaagtcaacttcgacaacgtggggcttggatatctttctctgcttcaagtagcc
acatttaaaggatggatggatatcatgtatgcagctgttgactcaagaaatgtagaactg
caacccaaatacgaagacaatctatacatgtacctctactttgtcatctttattattttc
ggctcattcttcacactgaacctgttcatcggtgtcatcatagataacttcaaccaacag
aagaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaagaagctgggctcaaagaaaccgcaaaaaccaatacctcgtcctgctaacaag
tttcaagggatggtctttgactttgtaacaaaacaagtctttgacatcagcatcatgatc
ctcatctgcctcaacatggtaaccatgatggtggagacggatgaccagagtcaggagatg
accaacatcctctactggatcaacctggtgttcatcgtcctgttcaccggcgaatgtgtg
ctcaagctcatctccctccgctattattatttcaccattggatggaatatttttgatttt
gtggtggtcatcctctccattgtagggatgtttctcgcggagctaatagagaagtatttc
gtgtcccctaccctgttccgagtcatccgcctggccaggattggacgaatcctacgcctg
atcaaaggtgccaaggggatccgcacgctgctctttgctctgatgatgtcccttcctgcn
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctacgttaagagggaagttgggattgatgacatgttcaactttgagacc
ttcggcaacagcatgatctgcctgttccaaatcaccacctctgcgggctgggatggactg
ctggcccctatactaaatagtggacctcccgattgtgaccctgaaaaagatcaccctgga
agctcggtgaagggagactgtgggaacccatctgtggggattttcttttttgtcagctac
atcatcatatccttcctggttgtggtgaacatgtacattgctgtcatcctggagaacttc
agcgttgccacagaagaaagtgcagagcccctgagtgaggacgactttgagatgttctac
gaggtctgggagaagtttgaccctgatgccacccagttcatagagttctgcaagctctct
gactttgcagcagccctggatcctcccctccttatcgcaaagccaaacaaagttcagctc
attgccatggacctgcccatggtgagtggagaccgtatccactgcctggacatcttattt
gcttttacaaagcgggtcttgggcgagagcggagagatggatgctcttcgaatccagatg
gaagagcgcttcatggcttccaatccctccaaggtctcttatgagcccattaccaccact
ctgaagcgcaaacaagaggaggtgtctgctattgtcatccagcgagcttacaggcgctat
ctcctgaagcagaaagttaagaaggtttcgtctatatataaaaaagacaagggtaaagaa
gatgagggaacgcccatcaaagaagacatcatcacagataaactgaatgagaattctacc
ccagagaagactgatgtgacaccttccaccacttctccgccttcctatgatagcgtgacc
aaaccagagaaggaaaaatttgaaaaggacaaatcggaaaaagaggacaaggggaaagat
atcagggaaagtaaaaaataa
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