KEGG   Mus pahari (shrew mouse): 110322297
Entry
110322297         CDS       T05929                                 
Symbol
Kdm5b
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mpah01009]
    110322297 (Kdm5b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110322297 (Kdm5b)
Enzymes [BR:mpah01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     110322297 (Kdm5b)
Protein phosphatases and associated proteins [BR:mpah01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110322297 (Kdm5b)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110322297 (Kdm5b)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like PHD-1st_NSD
Other DBs
NCBI-GeneID: 110322297
NCBI-ProteinID: XP_021054573
Ensembl: MGP_PahariEiJ_G0027862
LinkDB
Position
5:108820686..108890235
AA seq 1544 aa
MEPATVLPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLTSDTKDKEYKPHGIPQRQSVQPAETCPPARRAKRMRAEAMN
IKIEPEEATEARTHNLRRRMGCTTLKWENEKEMKSIIKQEPTEKKDCEIESEKDKPKSRA
KKTATAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRESVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYNLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQTQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQQSQKLLSEEMPSAAELQELLDVSFEF
DVELPQLTEMRIRLEQARWLEEVQQACLDSSSLSLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLRARPRHSLSSLATAVKEMEEIPAYLPNGTVLKDSVQRARDW
VQDVDALQAGGRVPVLETLIELVARGRAIPVHLSSLPRLEMLVAEVHAWKECAAKTFLPE
NSTYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKRSTKLESLSDLERALMESKETAA
AMATLGEARLREMEALQSLRFANEEKLLSPVQDVEMKVCLCQKTPATPMIQCELCRDAFH
TSCVAAPSISQSSRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKLVQDQVGSGLLSSRWAASAGQPSATEKVSQPPGTTSFSLPDDWD
NRTSYLHSPFSTGQSCIPLHGLSPEVNELLMEAQLLQVSLPEIQELYQTLLTKPSSAQQA
DRSSPVRSGSEKNDCLRGKRDAINSPERKLKRRPEREGLPSERWDRVKHMRTPQKKKIKL
SHPKDMNSFKLERERSYDLVRNAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTGKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggagccggccaccgtgctgcccccaggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggagagttcctgcctccccccgagtgtccggtcttcgagccgagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccattcgcttgtgatgtcgataaa
cttcatttcaccccacgaatccagaggctgaatgaactggaggcccaaacacgtgtaaaa
ttgaatttcctggaccagattgcaaagtattgggagctacaaggaagtactctgaagatt
ccccacgtggagagaaagatcttagacttgttccagctaaacaagttagtcgcagaagaa
ggcgggtttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatgggt
tttgctcctggtaaagctgtgggctcacatattaggggacattatgagcgaatactcaat
ccatacaatttgttcctgtctggagacagtctgaggtgtcttcagaagcctaacctgacc
tcagacacaaaggacaaggagtacaagccccatggcattccccagaggcagtctgtgcag
cctgcagaaacctgtcctccggcccgcagagcaaagcgcatgagagcagaggctatgaat
attaaaattgaaccagaagaggcaacagaagccaggactcataatctgagacgccgaatg
ggttgcacaactctaaaatgggaaaatgagaaagaaatgaaaagtatcatcaagcaagaa
cccactgagaagaaagactgcgagatagaaagtgagaaggacaagcccaagagccgggcc
aagaaaacggccactgcagtggacctgtatgtgtgcctcttatgtggcagtggcaatgat
gaggaccggctcctcctgtgtgacggctgcgatgacagttaccacaccttctgcctggtt
ccccctctccatgacgttcccaagggagactggaggtgtcctaagtgtttggctcaagaa
tgtagtaagccacaagaagcttttggctttgaacaagcagcaagggactatacactgcgt
acgtttggggaaatggcagatgcattcaaatctgattacttcaacatgccagtccatatg
gttcccacagagctggtggagaaggagttttggcggctcgtaagcactattgaagaagat
gtcacggtggagtatggtgctgatattgcttcaaaagagtttggtagtggatttcctgtt
cgagatgggaaaatcaagatttctcctgaggaagaggaatacctggatagtggctggaat
ttgaacaacatgccagtgatggagcagtctgtccttgctcatattactgctgatatatgc
ggcatgaaactcccctggttgtatgtgggcatgtgcttttcttccttctgttggcatatt
gaagaccactggagctattcaatcaactacctgcactggggtgagccaaaaacctggtat
ggagttccaggctacgctgctgagcagctagagaacgtgatgaagaagctcgctcccgag
ctctttgtgtcccagccagacctcctccaccagcttgtgaccatcatgaaccccaacact
ctgatgactcatgaagtgcctgtttatcgaacgaatcaatgtgctggggagtttgtaatt
acgtttccaagagcctaccacagtggcttcaaccaaggttttaattttgccgaggctgtt
aacttctgcactgttgattggctgccattgggccgccagtgtgtggagcattatcgcttg
ctgcaccgttattgtgtcttttcccacgatgaaatgatatgcaaaatggcttctaaggct
gatgtattagacgttgtggtagcatcaactgttcagaaggacatggccatcatgatcgag
gatgagaaagctttaagggaaagtgtccggaaattgggagtaattgattctgaaagaatg
gattttgagctgttgccagatgatgagcggcagtgtataaaatgcaaaactacatgcttc
atgtctgccatctcctgctcttgtaaacctggcctacttgtttgcctacatcatgtgaaa
gaattgtgttcctgccccccatataagtataacctgcggtatagatacactctggatgat
ctctatccgatgatgaatgcattaaagcttcgagcagagtcttacaatgaatgggcctta
aatgtgaatgaagccttggaagcaaagatcaataagaagaaaagtcttgtcagctttaaa
gctttgattgaagaatcagaaatgaagaaattcccagacaatgatcttttgcgtcacctt
cgcctagtcacgcaggatgcagagaagtgtgcctctgttgcccagcagttgcttaatggc
aaaaggcaaacaaggtatcggtctggtggaggaaagtcccagactcagctgacggtgaat
gaacttaggcagtttgtgactcagctgtatgcactgccgtgtgtccttagtcagacacca
ttgctaaaggatctcttgaatcgtgtggaagatttccaacagcaaagccaaaaactactg
tctgaggaaatgcctagcgctgccgagctacaggagttgctggatgtcagctttgaattt
gatgttgagcttccacagctcactgagatgcgcattcgcttagagcaggcccgatggcta
gaagaggtccagcaggcttgcctggactccagctccctttctttggatgatatgcgacgg
ctcatagacttaggggtggggctggctccatattctgctgtggagaaagctatggcccgc
ctgcaggagctgctaacagtgtcagagcactgggacgacaaagccaagagtctccttaga
gcaaggccgcggcattctttgagtagccttgctacagctgtcaaagagatggaggagatc
cctgcctacctgcccaatggtacagtcctgaaggattctgtgcaaagagccagagactgg
gttcaggatgtggatgcattgcaggcaggaggacgagtgccagtgttagaaacactcatt
gaacttgttgcaagaggccgagctatcccagtacatctgagttctttaccacgactggag
atgttagtagctgaagttcatgcttggaaagaatgtgctgctaaaacattcttgcctgag
aattctacatattctctgttagaggttctttgccctcggtgtgacattggccttttgggg
ctgaaaaggaaacagagaaagttgaaggagcccttgccgagtgggaagaagagaagcacc
aagttagagagcctgagtgatctggagagggctctgatggagagcaaagagactgcggca
gctatggcaactcttggggaagctcgcctacgagagatggaagctttgcagtctctcaga
tttgccaatgaagagaaattgttgtcacctgtccaagatgtagaaatgaaagtttgcttg
tgtcagaagactccagccactcccatgattcagtgtgaactctgcagggatgctttccat
actagttgtgtggcagcacccagtatttcacaaagctcccgaatctggctttgtcctcac
tgtcggaggtcagagaagcctccattagagaaaattctgcctctgctggcctccctacag
cgtataagagttcgtcttcctgaaggagatgcactccgatacatgattgaaagaaccgtg
aactggcaacatagagcccagcagctgctttcttcagggaatctaaaacttgtgcaagac
caagtgggttctggactgttgtctagcagatgggcagcctcagcaggacagccatcagca
acagagaaggtgtctcagcctcctggcacaacatccttttcattgcccgatgactgggac
aacagaacctcatatttacactctcccttctctactggacagagttgtatccccctccat
ggtttgagtccagaagtgaatgaattgctgatggaagcccagttgctccaggtatccctt
cctgaaattcaggagctttatcagactctacttacgaagccaagctctgctcagcaagcg
gaccgaagctcaccagttagatccggtagtgagaagaacgattgccttcgagggaaacga
gatgcaatcaacagtcctgagagaaaactgaaaaggcgcccagaaagagaaggccttccc
agtgagcggtgggatcgagttaaacacatgcggaccccccaaaagaagaaaatcaaactg
agtcaccccaaggacatgaacagtttcaagttagaaagagagcgtagctatgacttagtc
cgtaatgccgaaactcattccctgccctcagacacatcctactccgaacaggaggactct
gaggatgaagatgccatctgtccagcggtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcaccaggtctgtgttggtgtc
tctccagagatggcagagaaggaagactacatctgtgtgcgctgtactgggaaggacgca
ccaagccgaaagtaa

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