Mus pahari (shrew mouse): 110326892
Help
Entry
110326892 CDS
T05929
Symbol
Trim8
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8 isoform X1
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110326892 (Trim8)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110326892 (Trim8)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110326892 (Trim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-B_box
zf-RING_10
zf-RING_5
zf-Nse
FliD_C
Motif
Other DBs
NCBI-GeneID:
110326892
NCBI-ProteinID:
XP_021061186
Ensembl:
MGP_PahariEiJ_G0014528
LinkDB
All DBs
Position
1:157854474..157869079
Genome browser
AA seq
551 aa
AA seq
DB search
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYN
QKPGLEKNLKLTNIVEKFNALHVEKPPTALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQERLEEREQDIEDQLYKLESDKRLVEEKVSQLKEEVRLQYEKLH
QLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQRLFDKTEDVGFMK
NTKSVKILMDRTQTCTGSSLSPPKIGHLNSKLFLNEVAKKEKQLRKMLEGPFSTPVPFLQ
SVPLYPCGVNSSGAEKRKHSTAFPEASFLETSSGPVGGQYGAAGTASSEGQSGQPLGPCS
STQHLVALPGGAQPVHSSPVFPPSQYPNGSATQQPMLPQYGGRKILVCSVDNCYCSSVAN
HSGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPGLAVRDWLDASQQPGHQDFYRVY
GQPSTKHYVTS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaattggaagaactgctttgaagaggagctcatctgccccatctgcctgcac
gttttcgtggaaccggtgcagctgccgtgtaaacataacttctgccggggctgcatcggc
gaggcttgggccaaggacagtggccttgtgcgctgcccggagtgcaaccaggcctacaat
cagaagccgggcctggagaagaacctgaagctcaccaacatcgtggagaagttcaacgcc
ctgcacgtggagaagccgccgacggcactgcactgcgtgttctgtcgccgcggccccccg
ctgccggcacagaaggtctgcctgcgctgcgaggctccctgctgccagtctcacgtgcag
acgcacctgcagcagccctccaccgcccgcgggcacctcctggtggaggcggacgacgtg
cgggcctggagctgcccgcagcacaacgcctaccgcctgtaccactgcgaggccgagcag
gtggccgtgtgccagtactgctgctactacagcggcgcgcatcagggacactcggtgtgt
gacgtggagatacggaggaatgagatacggaagatgctaatgaagcagcaggagcggctg
gaggagagagagcaggacattgaggaccagctgtacaagctcgagtcagacaagcgcctg
gtggaggagaaagtgagccagctgaaggaggaggtgcggctgcagtacgaaaagctgcac
cagctgctggatgaggacctgcggcagacagtggaggtcctggacaaggcacaagccaag
ttctgcagcgagaacgcggcgcaggcgctgcaccttggggagcgcatgcaggaggccaag
aagctgctgggctccctgcagcgtctcttcgacaagacggaggacgtcggcttcatgaag
aacaccaagtctgtgaaaatcctaatggacaggacccagacctgcacgggcagcagcctt
tctccccctaagatcggccacctgaactccaaactcttcctaaacgaggtggccaagaag
gagaagcagttgcggaagatgctagaaggtcccttcagcacaccggtgcccttcctacag
agcgtccccctgtacccttgtggtgtgaacagctctggggccgaaaagcgcaagcactca
acagccttcccagaggctagcttcctggagacttcgtcgggcccagtaggcggccagtac
ggggcagcgggcacagccagcagcgaggggcagtctggtcaacccctggggccctgcagc
tccacgcagcatttggtggctctgccaggcggtgcccagccagtacactcgagtcccgtg
tttcccccttcgcagtaccccaacggctctgccacccagcagcccatgcttccccagtat
ggcggccgcaagattctcgtctgttctgtggacaactgttactgctcttccgtggccaac
cacagtggccaccagccgtaccccagatccggccacttcccctggacagtgccctcacag
gaatactcacacccacttccacccacaccctccgtccctcagtcccttcccggcctggcg
gtcagagactggctcgacgcttctcagcagcctggccaccaggatttctacagggtgtat
gggcagccgtccaccaaacactatgtgacaagctaa
DBGET
integrated database retrieval system
