Mus pahari (shrew mouse): 110330023
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Entry
110330023 CDS
T05929
Symbol
Rfc4
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03030
DNA replication
mpah03410
Base excision repair
mpah03420
Nucleotide excision repair
mpah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110330023 (Rfc4)
03410 Base excision repair
110330023 (Rfc4)
03420 Nucleotide excision repair
110330023 (Rfc4)
03430 Mismatch repair
110330023 (Rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpah03032
]
110330023 (Rfc4)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110330023 (Rfc4)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110330023 (Rfc4)
DNA replication proteins [BR:
mpah03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110330023 (Rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
110330023 (Rfc4)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
110330023 (Rfc4)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110330023 (Rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
110330023 (Rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
AAA_16
DUF815
AAA_22
DNA_pol3_delta2
AAA_30
AAA_11
RCF1-5-like_lid
AAA_assoc_2
ResIII
Mg_chelatase
AAA_24
SLFN-g3_helicase
RuvB_N
AAA_28
AAA_19
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
110330023
NCBI-ProteinID:
XP_021065617
Ensembl:
MGP_PahariEiJ_G0016318
LinkDB
All DBs
Position
12:complement(18433955..18450442)
Genome browser
AA seq
360 aa
AA seq
DB search
MQAFLKGASVSAKPQLTKDRGTPATAGSSGETKKVKPVPWVEKYRPKCVDEVAYQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKSFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRLHTCIANSITKYDFMXVRGLAPHTGFIIVSAQFSFQEIAYLVKISEGDLRKAITF
LQSATRLTGGKEVSEDVITDIAGVIPATTIDGIFTACHSGSFDKLEAVVKNLIDEGHAAT
QLVNQLHDAIIENENLSDKHKSIITEKLAEVDKCLADGADEHLQLMSLCATVMQQLTQNC
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctgaaaggcgcatctgtcagtgccaagccacaactgaccaaggaccgg
gggacacctgccactgcaggaagcagtggagaaaccaagaaagtcaaaccagttccttgg
gtggaaaaataccgtccaaagtgtgtggatgaagttgcttaccaggaagaggtggttgca
gtgctgaaaaagtctttagaaggagctgaccttcctaatctcttgttctatgggccacct
ggaactggcaaaacatccaccattttggcagcagctagagagctctttgggcctgaactc
tttcgattaagagtccttgagttaaatgcatctgatgaacgtggaatacaagtagtccga
gagaaagtgaaaagttttgctcagttaactgtatcaggaagtcgttcagatgggaagcca
tgtcctccctttaagattgtaattctggatgaagcagattccatgacttcagctgctcag
gcagctttaaggcgtaccatggaaaaagagtcaaaaacaaccagattctgcctcatctgt
aactatgtcagtcgactccacacatgcattgcgaattctataaccaagtatgattttatg
taggttagaggtcttgctcctcacactgggtttatcattgtttctgcccaattttctttt
caggaaatagcatatcttgttaaaatatcagaaggagatttacggaaagccattacattt
cttcaaagtgctactcgactaacaggtggaaaggaagtctctgaagatgtgatcacagac
attgctggggtgataccagctacaaccattgatggaatattcactgcatgtcacagtggc
tcttttgacaaactagaagctgtggtaaagaacctcatagatgaaggacatgcagccact
cagcttgtcaatcaacttcatgatgcaattatagaaaatgaaaatctctctgataaacat
aagtccattatcacagagaaacttgctgaagtggataagtgcttagcagatggtgcagat
gaacacctgcagttgatgagcctctgtgcaactgtgatgcagcaactaactcagaattgt
taa
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