Mus pahari (shrew mouse): 110332916
Help
Entry
110332916 CDS
T05929
Symbol
Ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
mpah05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110332916 (Ss18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110332916 (Ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110332916 (Ss18)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110332916 (Ss18)
GBAF(ncBAF) complex
110332916 (Ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
110332916
NCBI-ProteinID:
XP_021069941
Ensembl:
MGP_PahariEiJ_G0018750
LinkDB
All DBs
Position
15:complement(10853506..10912522)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVY
LATIADSNQNMQSLLPAPPTQTMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAQHYQGQQAPMGLMGQVNQ
GSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEESSQHYYEGGNSQYGQQQDAYQGPPAQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgaggcagcggggcaagggcgagatcacgcccgccgcc
atccagaagatgctggatgaaaacaaccatcttatccagtgtataatggactaccagaac
aaagggaaggcctcggagtgctcgcagtatcagcagatattgcatacaaacctggtatac
cttgctacaatagcagactctaatcaaaatatgcagtctctcttaccagcaccgcccaca
cagactatgccgatgggtcctggagggatgagtcagagcggccctccgccccctccccgc
tctcacaacatgccttcagatggaatggtgggtgggggccctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgccaatgcagggacccggaccc
agtcagctcagcatgacaaacagctccatgaatatgccttcaagtagccatggctccatg
ggaggttacaaccattctgtgccgtcatcccagagcatgcccgtgcagaaccagatgaca
atgagtcaggggcagccaatgggaaactatggtcccagaccaaacatgaatatgcaacca
aatcaaggtccgatgatgcaccagcagcctccttctcagcagtacaacatgccacctgga
ggggcacagcattaccaaggacagcaggcgcccatggggctgatgggccaagttaaccaa
ggcagtcacatgatgggccagagacagatgcctccctacagacctccgcagcagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggaatcctcacaacat
tactacgaaggaggaaactcccagtacggccaacagcaagacgcttaccaaggaccacct
gcacagcaagggtacccaccccagcagcagcagtacccggggcagcagggctacccgggg
cagcagcagggctatggtccttcccagggtggcccaggtcctcagtatcctaattatcct
cagggtcaaggtcagcagtatgggggctatagaccaacacagccaggaccaccccagcca
ccccagcagaggccttatgggtacgaccagggacaatatggaaattaccagcagtga
DBGET
integrated database retrieval system
