Mus pahari (shrew mouse): 110335988
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Entry
110335988 CDS
T05929
Symbol
Vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110335988 (Vps52)
Membrane trafficking [BR:
mpah04131
]
Protein recycling
Others
EARP complex
110335988 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
110335988 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_CC
Vps52_C
Sec3_CC
Dor1
Sec3_C-term
COG6_N
ATG16
Motif
Other DBs
NCBI-GeneID:
110335988
NCBI-ProteinID:
XP_021074085
LinkDB
All DBs
Position
18:1857358..1867118
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AA seq
669 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDVEEEEGPLGGGSGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYIETLSKIYLSYY
RSYVGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGAVISPAELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFIVSGPAAHDLFHAVMG
RTLSMTLPLEQQADIHLSATETPGVLPGRLLRCHCCFPLYPHCSPVPQHFSEEGRPCPGQ
GQHWRRAYSLTITLKVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLN
ARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKASVE
SLSQDVMRSFTNFRNGTSIIQXXLTQLIQVYHRFHRVLSQPQLRTLPARAELINIHHLMV
ELKKHKPNF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcagcgaccatggcggccgctgcccgggagctggtgttgcgggctggggcc
tcagatgtggaggaggaggagggcccgctgggaggaggttctggactccaagagccccta
caacttggtgagttggatatcacctctgatgaattcatcctggatgaagtggatgttcac
atccaggcaaatctggaggatgagttagtgaaggaagctctcaagacgggtgtggatctt
cgccactattcaaagcaggtggagctggagctgcagcagattgagcagaagtcaatccgg
gactatatccaagagagtgaaaacatagcgtcgctgcacaaccagatcacggcctgcgac
gccgtcctggagcgcatggaacagatgctgggagcttttcagagcgatctcagctccatc
agctctgagatccgaaccctgcaggagcagtcgggggccatgaacatccgacttcgtaac
cgacaggcagttcgggggaaacttggggaacttgtggatgggctggtggtgccctctgct
ctggtcacagcaattctggaagctccagtgacggagcccaggttcctggagcagctgcag
gagctggatgccaaggcagccgcggtcagagagcaggaggccaggggcaccgctgcctgt
gctgacgtcagaggcgtgctcgaccggctccgggtcaaggcagtgacgaagatccgggag
ttcatcctccagaagatttactcattcagaaagcccatgaccaactaccagattccccag
acggccctgctcaagtacaggtttttctatcagttcctgctgggcaatgagcgagctaca
gccaaggagatcagggatgagtacatagaaacactgagcaagatctacctgtcctactac
cggtcctacgtggggcggctcatgaaagtgcagtatgaggaagttgctgagaaagacgat
ctgatgggtgttgaagacacagcaaagaaaggcttcttctcgaagccgtccctccgaagc
agaaataccatctttaccctgggcactcgtggtgctgtcatctcaccggccgagctcgag
gcccccatcctggtgccccatactgcccagcgtggagagcagaggtatccgttcgaagca
ctcttccgcagccagcactatgccctcctcgacaattcttgccgtgaatatcttttcatc
tgtgaatttttcatcgtgtctggcccagctgcacatgacctgttccatgccgtcatgggc
cgcacgctctccatgacactgccactggaacaacaagctgacattcatttgtctgctaca
gaaacacctggagtcctacctggccgactgctacgatgccattgctgttttcctctgtat
ccacattgttctccggttccgcaacatttcagcgaagagggacgtccctgccctggacag
gggcagcattggcgtcgggcatactcactcaccatcaccctgaaggtggctgcagagttc
tcctccaggaaggagcagcttgtgtttctgatcaacaactatgacatgatgctcggggtg
ctgatggagcgggctgctgacgacagcaaagaggtggagagtttccagcagctgctcaat
gctcggacacaggagttcattgaggagttgctgtctccccccttcgggggtctggtggca
ttcgtgaaggaggctgaagccttgattgagcgtgggcaggctgagcggctccgaggggag
gaagcccgagtcactcagctgatccgtggctttggtagttcctggaaggcgtcagtggag
tccctgagtcaggatgtaatgcggagtttcaccaacttccgaaatgggaccagcatcatc
cagnnnnngctgacccagctgatccaggtctaccatcgcttccaccgggtgctgtcccag
ccccagctccgcaccctcccggccagggctgagctcatcaacatccatcacctcatggtg
gagctgaagaaacacaagcccaatttctga
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integrated database retrieval system
