Mus pahari (shrew mouse): 110339096
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Entry
110339096 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110339096
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110339096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110339096
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110339096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
110339096
NCBI-ProteinID:
XP_021078253
Ensembl:
MGP_PahariEiJ_G0024416
LinkDB
All DBs
Position
23:complement(25559423..25576999)
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AA seq
1208 aa
AA seq
DB search
MSPAAAAADGGERRRPPLGGREGRSRARGYGGPAGAAALGLALLGLALYLVPAAAALAWL
AVGASAAWWGLSREPRGPRALSSFVRDARRHPRPALTASPPPAKSPVNGSLREPRSPLGG
PDPAELLLMGSYLGKPGPPEPALPQDPRDRPGRRPPARSPPPASAVQRVHHVYPALPTPL
LRSSRRPPHRDCGPLSSRFVITPRRRYPIQQAQYSLLGALPTVCWNGGHKKAVLSPRNSR
MVCSPVTVRIAPPDSKLLRSPVPEQILDTTLSSPSSIAPDPCAKETVLNALKEKKKRTVA
EEDQLHPDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLN
KRSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQ
TPERPAKKTREEEPCQQSSSSAPLVTDKESPGEKVTDTATGKQQSSWTSPPTPGSSGQRK
RKIQLLPSRRGDQLALPPPPELGYAITAEDLDMERKASLQWFNKILEDKPDDASSSAKDG
PPASSPPFTFTLSTVGPAASPAAVPAPSSNPLLESLKKMQESPAPSSSEPAEAATVAAPS
PPKTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASASSITPLTDTKSPGVSRTEQSVS
TPASAAPSPTPKPSMLFGMLSPPASSSSLATPPPACASPMFKPIFPATPKSESENPLPSS
SSAAATTAPASTAPPTTASTTAPKFKPIFDKMEPFTAMPLSTPFSLKQTTATATTTATSA
PLFTGLGTATSTVASGTSASASKPVFGFGVTTASTASSTMTSTYQSLLFGGAPPVTTSSS
TPALASIFQFGKPLAPAASAAGTSFSQPLASSAQTAASSSSGGFSGFGSTLTTSTSAPAT
TSQPTLTFSNTVTPTFNIPFSSSAKPTLPTYPGANSQPTFGATDGATKPALAPSFGGSFT
FGNSVASAPSAAPAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFSFGSA
TTSGFGAAAAAAAATTTQTTNSGSSSXLFGSSAPSPFTFGGSAAPAGSGGFGLSATPGTS
STSGTFSFGSGQSGTTGTTASFGGSLSQNTLGAPXQSSPFAFSVGSAPESKPVFGGTSTP
TFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKTPGAGQRLQA
GRQHTRKK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctgacggaggcgagcggcggcggcccccgttgggcgga
cgggaaggccggagccgggcccgcggctacggaggaccggcgggtgccgcggccctcggc
ctagcgctgctcggcctcgcgctctacctggtgcccgcggcggccgcgctggcctggctg
gccgtgggggcgagcgcggcctggtggggcctgagccgagagccccgcggcccgagggcc
ctgtcgtcgttcgtgcgcgacgcgcgccgtcacccgcggcccgcgctcaccgcttcaccg
cctccggccaagtcgccagtcaacggtagcctccgcgaaccccgcagcccgctcggaggc
cccgacccggctgagctcttactcatgggcagctacctgggcaagcccgggccgcccgag
cctgccctcccgcaggacccacgggacaggccggggcgccgcccacccgcacgctccccg
cctccggcgtcggcggtccagcgagtccaccacgtctaccccgcgctccccaccccgctt
ttgcgatcctcccggaggccgccccaccgagattgtgggcctttatccagtcggtttgtt
ataacaccccgaagacgatatcccattcagcaagcccagtattccttgcttggggcactt
ccaaccgtctgctggaatggtggccataagaaggctgtgctgtctccacggaactccagg
atggtgtgcagcccagtgacagtgaggattgcccctccagacagcaagctattgcgctca
ccagtgccagagcagatcctcgatacaaccctgtcttcaccatcaagtattgctccagat
ccttgtgcgaaggagactgtcctgaacgccctcaaggagaagaagaaaagaacagtggcg
gaggaagaccagctgcaccctgacggccaggaaaacaagagaaggcgccatgatagcggt
gggagcggacattcagcattcgagccccttgtggccaacggagtgcctgctgcatttgtg
cctaagcctggctccctgaagagaagtctggcttcccagagctcagatgaccacttgaac
aaacggtctcgcacctcttctgtgagctccctgactagtacgtgcacaggaggcatcccc
agctctagccgcaatgccatcaccagctcctacagctccacccgtggcatttcacagctg
tggaagaggagcggtcccacatcttctcccttctccagtccagcttcctcccgctcccag
acgccagagaggccagccaagaagacaagagaggaggagccatgtcagcagtctagttct
tcagctcccttggtgacagacaaggagtccccaggagaaaaggttacagatacagccact
gggaagcagcagagttcatggacttccccacccacacctggcagctccgggcaacgcaaa
cgcaagatccagttgctgccctcccggcgaggggaccagctcgccttgcctccgccccca
gagcttggctatgccatcactgctgaagacctggacatggagaggaaagcctcactgcag
tggtttaacaagatcttggaggacaagccagatgatgcttcctcctcagccaaggacggc
ccccctgccagcagccctcccttcacattcaccctgtctactgtggggcctgctgcctca
ccggctgccgtcccggctcccagctctaacccactgttggagagcctgaagaagatgcag
gagtctccggccccatcatcctcggaacctgctgaggcagcaacagttgcagccccttca
cctccgaagacccccagcctcctggcccctcttgtctcaccactggcaggacccctagcc
agcacctcctcagactccaagcctgcagccaccttcctggggctggcttctgcttcctct
ataaccccactcactgacaccaagtctcctggagtctctcgtactgagcagtctgtcagc
accccagcctccgcagctccctccccaaccccaaagcccagcatgctgtttggcatgctg
agtccacctgccagctcttcttcccttgccactccgcctccggcttgtgcttctcccatg
tttaagcccatttttccagccacacctaaaagtgagagtgagaaccccttaccaagtagc
tcctcggccgccgccaccacagctccagccagcaccgccccccccacgacagccagcacc
acggctcccaagttcaagcccatttttgacaagatggagccattcacagccatgcccctg
tcaactcccttctccctgaagcagacaacggctacagccaccactacagccacatcagct
cctctcttcactggcctgggcactgccacctccacggtggcctctggcacctcagcttct
gcctcaaagcctgtgtttggctttggagtgaccactgcgagcactgccagtagtaccatg
acttccacgtaccagtcacttctgtttgggggagccccccctgttactacttctagctcc
accccagccctggcctccatcttccagtttggcaagccccttgccccagcagcatctgca
gcaggcacctcctttagccagcccctcgccagctctgcccagaccgccgccagcagtagc
agtggtggcttcagtggatttggcagcaccctcaccacctccacctcggcccctgccacc
accagccagcccacgctgaccttcagcaacactgtcacccccaccttcaacattcccttt
agctccagtgccaagcccacgctccccacctaccctggagccaactcacagcccacgttt
ggagccaccgatggggccaccaagccagcacttgccccaagttttggcggctcgttcact
ttcggcaactccgtggcctcagccccttcggcagccccagccccagccccagccaccttt
ggcagtgctgcacagccagctttcggagggttgaaagcngcagcctccacctttggcgcc
cctgccagcactcagccagctttcggtagcaccacntctgtgttttcttttgggtcagcc
accacatctggctttggtgctgctgctgctgccgctgccgctaccaccacacagaccacc
aacagtgggagcagcagcnntctgtttggcagctctgctccatccccattcacatttggt
ggctcagcagctcctgctggcagtggaggctttggacttagtgctacaccaggcaccagc
tccacctctggaactttcagctttggatctggacagagtgggaccacgggcaccaccgcc
tcctttgggggaagtctgagtcagaacaccctgggcgcacccagncagagttcacccttt
gccttcagtgtgggcagcgcacctgaaagcaagcctgtgtttggaggcacatccacacct
actttcgggcagagtgcccctgccccaggagtaggcaccacagggagcagcctctcattt
ggggcctcttcaacacctgcccaaggctttgttggagttggaccttttggatcagcagcc
ccttcgttttccattggcgcgggatccaagaccccaggggctggacagcgacttcaggct
ggaaggcagcacacccgcaagaagtag
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