Methylocystis parvus: F7D14_01260
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Entry
F7D14_01260 CDS
T06304
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpar
Methylocystis parvus
Pathway
mpar03420
Nucleotide excision repair
mpar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7D14_01260
03430 Mismatch repair
F7D14_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpar03400
]
F7D14_01260
Enzymes [BR:
mpar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7D14_01260
DNA repair and recombination proteins [BR:
mpar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7D14_01260
MMR (mismatch excision repair)
Other MMR factors
F7D14_01260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_11
UvrD_C_2
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGM99477
UniProt:
A0A6B8M3E7
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All DBs
Position
complement(276086..278008)
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AA seq
640 aa
AA seq
DB search
MGTDDDNYDAEADKTIMACLDLAKPRSFFLYAGAGSGKTRSLVNAIRAICRDQGRHLSLS
GRRIGVITYTNSACDEIKQRLEFDPRVEVSTIHSFAWSLIAGYDTDIRQWLDQNLLNEIA
ELQVAQAKGRPGTKATSDRARSIESKQRRRASLGEIRRFIYSPTGDNRTRDALSHAEVIM
MTSDFLGTKNGLRKLLMSRFPILLIDESQDTNRGLMDALLGVQAANQTRFCLGLFGDTMQ
RIYADGKVGLAEAIPPDWSRPVKRMNHRCPSRVVDLINKVRMDDDGQMQHARSDAAKGVV
RLFVLPETTSEKSHAEAEIARSMSQITGDPDWVAGTDAIKTLALEHLMSARRFGFESFFA
PLYAVPRIRTGILDGSGAGIGLFTREILPLTQALAAGDRFASAAIIRKSSPLLERDQLEA
AGERQLDLLRNAKAACDGLHALCTKEDSPSLLALLNYVASRKLFTIPDALLPFVASTEPD
DSLETGVGHGDENHAHGKALDDEEAKSETGAWRLALDATLDQIERYDLYVRGLSPFDTHQ
GVKGLEFPRVMVIVNDEEARGFLFSYEKLFGAKEKSKTDIDNEAAGKETTIERTRRLFYV
TCSRAKQSLAIVYYSSSPSVVRDAMIERGWFEPDEIEIIS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
attgggaccgacgacgacaattacgatgccgaggccgataagacgatcatggcgtgcctc
gatctcgcaaagccacgcagcttcttcctctacgccggtgcgggctccggaaagacgcgg
tcgctggtgaacgcgatacgggccatttgccgtgaccaggggcggcacctttcgctcagc
ggtcggcggatcggcgtcatcacctacaccaactcggcgtgcgacgagatcaagcagcgt
ctcgagttcgatcctcgggtcgaggtgtctacgatccattcgttcgcctggtcgctgatc
gccggctacgatacggacatccggcaatggctcgaccagaatctgctcaacgagatcgcg
gagcttcaggtggctcaggccaaggggcggccgggcaccaaggcaaccagtgatcgtgct
cgatcaatcgagagcaaacagcggcggcgcgccagcctcggcgaaatacggcggttcatt
tacagcccgaccggggacaaccggacgcgcgatgccctaagccatgccgaggtcatcatg
atgacatcggatttccttgggacgaagaatgggctgcgaaagctgttgatgtcgcgcttc
ccgatcctgctgattgatgaaagccaggacaccaaccgggggctaatggacgcgcttttg
ggcgtgcaggcggccaatcaaacacgcttctgccttggcctgtttggcgacacaatgcag
cgcatctatgcagacggaaaggttgggctagccgaagcgatcccccccgattggtctcgg
ccggtgaagcggatgaaccatcgctgtccttctcgcgtggttgatctgatcaataaggtc
cgaatggacgatgatggccagatgcagcatgcgcgcagcgacgcggcaaagggtgtggtt
aggctgtttgtgttgccggagaccacttccgagaagtcacacgcggaagccgaaatcgcc
cggtcgatgtcgcagatcaccggcgatccggactgggtggccggcaccgatgcgatcaag
accctagcgctggagcacctgatgtcagcgcgacgctttggcttcgagtcgttctttgcg
ccgctctatgctgttccgcggatcagaaccggtatcctcgatggcagcggtgcgggcatc
ggcctgttcacccgtgagatcttaccacttacccaggccttggccgctggggatcgtttt
gcgtcggctgcgatcatccgtaaatcctcgcctttgctcgagcgcgaccagcttgaggcc
gcaggcgagcggcagctcgatctactccgcaacgcgaaggcggcctgtgacggattgcac
gcgctctgcacgaaagaggattcaccgagcctgctcgcacttctgaactatgttgcgagc
aggaagctatttacgatccctgatgcgttgctgccatttgtcgcctcaaccgagcctgac
gatagtttagagactggcgttggacatggcgacgagaaccacgcccatggcaaggccctc
gacgacgaagaggcgaagagcgagactggggcttggcggctcgcgctggacgcgacgctg
gatcagatcgagcgctacgatctctacgttcgcggcctctcgccgttcgacacccatcag
ggagtgaagggactcgagttcccgcgtgtcatggtcatcgtcaacgacgaggaggcccgt
ggcttcctgtttagctacgagaagctcttcggggcgaaggagaagagcaagaccgacatc
gacaacgaagctgcgggaaaggagacgaccatcgaacgcacacgccgcctgttttacgtt
acgtgcagccgcgccaagcagagcttggcgatcgtctactattcgagcagcccgagcgtc
gtgcgcgacgcgatgatcgaacgcggttggttcgagccggacgagattgagattatctca
taa
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