Methyloradius palustris: ZMTM_04670
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Entry
ZMTM_04670 CDS
T07445
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mpau
Methyloradius palustris
Pathway
mpau02024
Quorum sensing
mpau03060
Protein export
mpau03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mpau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ZMTM_04670 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ZMTM_04670 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ZMTM_04670 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mpau02044
]
ZMTM_04670 (ffh)
Enzymes [BR:
mpau01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ZMTM_04670 (ffh)
Secretion system [BR:
mpau02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ZMTM_04670 (ffh)
Eukaryotic Sec-SRP protein
ZMTM_04670 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_31
Zeta_toxin
AAA_22
AAA_30
AAA_33
ParA
Mg_chelatase
YqeC
ABC_tran
6PF2K
AAA_18
APS_kinase
ArsA_ATPase
AAA_16
Thymidylate_kin
KTI12
DO-GTPase1
AAA_24
Helicase_RecD
T2SSE
ResIII
AAA_19
AAA_5
TPP_enzyme_M
AAA_14
nSTAND3
AAA
NACHT
MobB
Motif
Other DBs
NCBI-ProteinID:
BCM24208
UniProt:
A0A8D5JZY7
LinkDB
All DBs
Position
476667..478055
Genome browser
AA seq
462 aa
AA seq
DB search
MVIGLSNAGKYKMFENLSGRLQGVIKNLRGQARLTEDNIADALREVRMALLEADVALPVV
KDFIAQVKERAQGREVLQSLTPGQAVIQVVHEELTKLMGTDNAALNLAAVPPAIILMAGL
QGSGKTTTSAKLARLLKAQKKKVLLTSADIYRPAAIEQLRTLAKSLDVDFFESDISQKPE
TIATNVLDHAKRHFYDVVIFDTAGRLGIDEAMMAEIKALHTLLNPIETLFVVDAMQGQDA
INTARAFGETLPLTGVVLTKLDGDARGGAALSVRHITGKPIKFIGVSEKVDGLEPFHPER
MASRILGMGDVLSLIEHAQKNVDLDEAKKLADKVKSGKNFDLEDYKSQIQQMRNMGGMGA
LMDKLPAQMAGMAGQMSGEAGDKAVRRMEGIINSMTPLERRKPELIKATRKRRIALGAGV
QVQEVNRLLNQFEDVQKMMKMFAKGGMTKMMRAMQGRFPGLK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtgataggtttaagcaacgctggaaaatataaaatgtttgaaaacttaagtggaaga
ctgcaaggcgtcatcaagaatctacgtggccaagcacggctgacggaagataacattgcc
gatgccttgcgcgaagtgcgtatggcgctgctagaggccgatgttgctttgccagtcgtt
aaagactttatcgcccaagtaaaagaacgtgcacaaggccgtgaagtgctgcaaagcctc
acgccaggccaagccgtcattcaggtggtgcatgaagagctcaccaagctgatgggcaca
gataatgcggcgcttaacttggccgccgtaccgcccgcaattatcctcatggcaggtttg
cagggctctggtaaaaccaccacttcagccaaactcgcgcgcttgctcaaagcacagaaa
aagaaagtgttgctgaccagcgcggatatttatcgcccagcggctatcgagcaattaaga
actctggccaaaagtctggatgtcgatttctttgaatccgatatttcgcaaaaaccagaa
acaatcgccaccaatgtactagaccacgccaaacgccatttctacgatgtggtgatcttc
gataccgcaggtcgcctgggtattgatgaagccatgatggccgagatcaaggcgctgcac
acgctgttaaacccaatcgaaaccttgtttgtggttgatgccatgcagggccaagatgcc
atcaacactgcgcgtgcctttggcgaaactttaccgttaacgggcgttgtactcaccaag
ctagatggcgatgcacgtggcggtgctgcactctcagtgcgccacattactggcaagccc
atcaagtttatcggtgtcagcgaaaaggtcgatggcctcgaacccttccacccagagcgc
atggcctcacgcatactcggcatgggcgatgtgctctcgctcattgagcatgctcaaaag
aatgtcgatctggacgaagccaaaaaactggccgacaaagttaaatcaggcaaaaacttt
gaccttgaagactacaaatcccagatacagcaaatgcgtaacatgggcggcatgggtgcg
ctcatggataagctccccgcacaaatggcgggcatggcaggccagatgagcggagaagca
ggcgataaagccgtgcgccgtatggaaggcatcatcaactccatgacgccattagagcgc
cgcaagccagagctcatcaaagccacccgcaagcgccgtatcgcactcggcgcaggcgtg
caggtgcaagaggtcaatcgactgctcaaccagtttgaagacgtgcaaaaaatgatgaag
atgttcgccaaaggcggcatgaccaaaatgatgcgcgccatgcaaggcagattcccagga
ttaaagtaa
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