Marinomonas posidonica: Mar181_3363
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Entry
Mar181_3363 CDS
T01508
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mpc
Marinomonas posidonica
Pathway
mpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mar181_3363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpc03021
]
Mar181_3363
03400 DNA repair and recombination proteins [BR:
mpc03400
]
Mar181_3363
Enzymes [BR:
mpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mar181_3363
Transcription machinery [BR:
mpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mar181_3363
DNA repair and recombination proteins [BR:
mpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mar181_3363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AEF56381
UniProt:
F6CUG1
LinkDB
All DBs
Position
complement(3692575..3696675)
Genome browser
AA seq
1366 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKLPPVLDVPYLLAIQLESYRNFLQEGKAIAERGELGLHGAFKSV
FPMVSFSGNAALEYVDYRLGKPVFDVKECQLRGVTYAAPLRVRVRLIIYDKESSNKAIKD
IREQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLHSARV
IPYRGSWLDFEFDPKDCVFVRIDRRRKLPATILLRALGCGTEQILDTFFETTRFYLNRDG
FEMELIANRLRGDTALFDIADGNGEVIVEEGRRITAKHIRILEKAGLDRLSVPLEYMLGK
VTAKNLVHPSTGELIAEANTELSVDLLEALVSSGITEVETLYTNDLDNGPFISDTLRIDP
TSNQLEALVEIYRMMRPGEPPTKESAEGLFQGLFFSEDRYDLSSVGRMKFNRRLGRDEDT
GSGVLDNEDIVAVLKTLLDIRNGNGMVDDIDHLGNRRVRSVGEMAENQFRVGLVRVERAV
KERLSMAEADGLMPQDLLNAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGP
GGLTRERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSTYARTNSYGFLETPYRKVI
DGKITDETVYVSAIDEAKYVIAQASANVDEEGRLVDELVQVRHMHETTLIPKEKVNLMDV
SPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLKADKPVVGTGMEKNVAKDSGVC
IVARRGGEIESVDASRIVVRVNSEETVAGEAGVDIYSLTKYVRSNQNTCINQRTLVMKGE
KVASGDIMADGPSVDMGDLALGQNMRIAFMPWNGFNFEDSILVSERVVEEDRFTSIHIQE
LTCVARDTKLGPEEITADIPNVGEGALSKLDTSGVVYIGAEVEPGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSQRVKTGTRGTVIDVQVFTRDGIEKDERAKSIEKSQLDQ
VRKDLNEEFRIVEKATFERLAEALVGQQAEGGPGLARNAVITEDYLANLDHPEWFKIRVA
NEEASEQLEKAQAALIERRKELDAKFEDKKRKLQTGDDLAPGVLKIVKVYVAIKRRIQPG
DKMAGRHGNKGVISKIMPVEDMPYDENGDPVDIVLNPLGVPSRMNVGQVLETHLGAASKG
LGRKINEMLAAEREKAEAVTELRGFLNEIYNGYEGDLQCARTEDLDSFTDEEILTLAANL
KGGVPMASGAFDGAKEAEIKRMLRLAGLNESGQVTLYNGRTGDAFERPVTVGYMYMLKLN
HLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSD
DVNGRTKMYKNIVDGDHRMEPGMPESFNVLVKEIRSLGIDIELENE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgtatccgtaaggatttcggtaaactgccgccc
gttttggatgtgccatacttgctggcaattcagcttgaatcctatcgcaactttctgcaa
gaaggtaaagcgattgcagagcgtggggaattaggtctgcatggggcctttaaatctgtc
tttccaatggtcagtttttccggcaatgcggcgctagaatacgtcgattaccgtttaggc
aagccagtatttgatgttaaagagtgtcaattgcgtggtgttacctacgcggcacctttg
cgagttcgagttcgactcatcatttatgataaagagtcctctaacaaggccatcaaagac
atccgcgagcaagaagtttacatgggcgaaattccgctcatgacagacaatggtactttt
gttatcaacggaactgagcgtgtaattgtctctcaattgcatcgttctcctggtgtgttc
ttcgatcacgatcgtggtaaaacacactcttcaggtaaattgttacattcagctcgtgtc
attccataccgtggttcatggttggatttcgagtttgatccaaaagattgcgtctttgtt
cgtattgaccgtcgtcgtaaattgcctgcaaccatcttgttgcgtgcattaggttgcggt
acagagcaaatcttagatactttcttcgaaacaacacgcttctacttgaatcgtgatggt
tttgagatggagttgattgcgaatcgccttcgtggtgatacggcattgtttgatattgca
gacggcaatggcgaagtgattgttgaagaaggtcgtcgtattacggctaagcacattcgt
attcttgagaaagcgggtttagaccgtctttctgtgccacttgaatacatgcttggtaaa
gtaacggctaagaacctagttcacccatcaacaggtgaattaatcgcagaagccaatact
gagttgtctgttgatcttctagaggctttggtttcttcaggcatcactgaagtggaaacc
ctgtatacaaatgacttggataatggtccattcatttccgatacattacgcattgatccg
actagcaatcagttagaggcgttggttgagatctatcgcatgatgcgtccaggcgagcca
ccaaccaaagaatctgctgaaggtctattccaaggtttgttcttctctgaagatcgttat
gacctttcttctgttggtcgtatgaaattcaaccgtcgtcttggtcgtgatgaagataca
ggttctggtgtcctagataacgaagacatcgttgctgttctaaaaaccttgctggatatc
cgtaatggtaacggcatggttgatgatatcgatcaccttggtaaccgtcgtgttcgttct
gttggtgaaatggcagaaaaccaattccgtgttggtttggtgcgtgttgagcgtgccgtt
aaagagcgtctgtcaatggcagaagctgatggcctaatgccacaagacttgttgaatgct
aagccagttgcggcggcaatcaaagagttcttcggttctagccaattgtcacagttcatg
gaccaaaacaacccgctttctgaagtcacgcacaagcgtcgtgtttcggcattggggcct
ggtggtttgacacgtgagcgtgctggttttgaggtacgtgacgtacacgctactcactac
ggtcgtgtttgtcctatcgaaactccggaaggtccaaacatcggtttgatcaactctttg
tctacctatgctcgcactaacagctatggtttcctagagacgccttaccgtaaagtaatt
gatggcaagatcactgatgaaacggtttacgtttcagcgattgatgaagcgaaatacgtt
attgcccaagcgtctgcaaatgtagatgaagaaggccgtttggttgatgagttggttcag
gttcgtcatatgcacgaaaccactttgattccaaaagaaaaagtaaacttgatggacgta
tcgccacgccaggttgtatctgttgcggcgtctttgattccattccttgagcacgatgat
gccaaccgtgccttgatgggatcgaacatgcaacgtcaagccgtaccaacacttaaggca
gataagccagtagtcggtacaggtatggagaaaaacgtcgcgaaagattctggcgtttgt
atcgttgcacgtcgtggtggtgagattgaatctgttgatgctagtcgtatcgttgttcga
gttaactcggaagaaacggtagctggtgaagcgggtgtggatatctacagcttaacgaaa
tacgttcgttcaaaccaaaatacctgtattaatcagcgtactttggtaatgaagggtgaa
aaagtagcgtctggcgatattatggcggacggtccttctgttgatatgggtgatttggct
cttggtcaaaacatgcgtatcgctttcatgccttggaacggttttaacttcgaggattcc
atcttggtttctgagcgtgtggttgaggaagatcgttttacttccatccacattcaggaa
ctgacgtgtgtggctcgtgatactaagcttgggcctgaagagattacagccgacattccg
aatgttggtgaaggtgcgctatcgaaacttgatacttctggtgtggtttacatcggtgcg
gaagttgagccaggcgatattctggttggtaaagtgacaccgaaaggtgaaactcagctg
acgccagaagagaagctattgcgtgccatcttcggtgaaaaagcttcggacgttaaagat
acgtctcagcgtgttaaaacaggtactcgcggtactgtaatcgacgtacaagtcttcact
cgtgatggtatcgagaaagatgagcgtgctaagtccattgagaaatctcagttggatcaa
gttcgtaaagacttgaacgaagaattccgtattgttgagaaagcgacattcgaacgtttg
gctgaagccctagtgggtcagcaagctgaaggtggtccaggattagcgcgtaatgcagtg
atcactgaggattacctagcgaatttagatcacccagagtggtttaagattcgtgtggca
aacgaagaagcaagcgagcagcttgaaaaagcgcaagcggctttgatcgagcgtcgtaaa
gagcttgatgcgaaatttgaagacaagaaacgtaaactacaaacaggtgatgatttagcg
cctggcgttcttaagatcgtgaaagtttatgtggcaattaaacgtcgtattcagcctggt
gataaaatggccggccgtcatggtaacaagggtgtaatctctaaaatcatgccggtagaa
gacatgccatacgatgagaacggtgatcctgtggacatcgtgttgaacccgttaggtgtt
ccttcgcgtatgaacgttggtcaggttcttgagactcacttgggtgcggcgtcgaaaggt
ttgggtcgcaagatcaatgaaatgcttgcggcagagcgtgaaaaagcagaagcagtgact
gagttacgtggattcctaaatgaaatctacaatggctatgaaggtgacttgcaatgtgca
cgtacggaagatctggacagctttacagacgaagaaattctaaccttggcagccaacctt
aaaggtggtgttccaatggcgtctggtgcctttgatggtgcgaaagaggcagaaattaaa
cgtatgttgcgtctagctggcttgaatgaaagtggtcaggttaccttgtacaacggtcgt
actggtgatgccttcgagcgtcctgttacggttggttacatgtacatgttgaaattgaac
cacttggttgatgacaagatgcacgcgcgttctactggttcttacagcttggttactcag
cagccgctgggtggtaaagcgcagttcggtggtcagcgtttcggtgagatggaggtatgg
gcactagaagcatacggtgcggcatacacgctacaagaaatgttgacggttaagtcggat
gatgtgaatggtcgtactaagatgtataagaacatcgtagatggcgatcaccgcatggaa
ccaggcatgcctgagtccttcaacgtgttggtgaaagagatccgttctcttggtatcgac
atcgagttggaaaacgaataa
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