Methanocella paludicola: MCP_1953
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Entry
MCP_1953 CDS
T01142
Symbol
cobD
Name
(GenBank) probable cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
mpd
Methanocella paludicola
Pathway
mpd00860
Porphyrin metabolism
mpd01100
Metabolic pathways
mpd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MCP_1953 (cobD)
Enzymes [BR:
mpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
MCP_1953 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BAI62025
NITE:
MCP_1953
UniProt:
D1Z003
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All DBs
Position
1959485..1960408
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AA seq
307 aa
AA seq
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MIIKFILEAFLLAIVFDLVFAEPRPLFHPTVWIGTLIGFLDRHAAGQFKRLYGVLMALFC
IGMAAIAGYFIPYLLYQVSPLLALLVTAYLLKSTFSLSFLWQISGDIYGDLKAGKLDAAR
AKLPALVGRDVSKLDEGQMASCVIESLGESFVDGIFSPLFYFVIFGLPGAMAYRAINTLD
SMVGYKDEKHIKVGWASARIDDVANFIPARLAVLIMALISGHLIRSLKTSMRDGRNAPSI
NSGYPMAAFAGALGLRLEKLGYYVLGEGLKPCGADDIPKAIWLNRLLTATLVIVIIAALW
LTPLPLL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatcataaaatttattcttgaggcgttcctgctcgccatcgtcttcgacctcgttttt
gccgagccccgccccttgttccaccccacggtctggatcggcacgctcatcggctttctg
gataggcatgcggccgggcagttcaagcgcctgtacggcgtgctgatggcgcttttctgt
atcggcatggccgccattgcgggctacttcatcccctacctgttataccaggtatcgcct
cttctggcgctcctcgtcacggcgtacttgttaaaatccacgttcagcctttcattctta
tggcagatatccggcgatatttacggcgacttaaaagcaggtaagctcgacgcggcaagg
gcgaagctcccggcgctcgtgggacgggacgtcagcaagctcgacgagggccagatggcc
tcctgcgtcatcgagtcgctgggcgaaagcttcgtggacggcatcttctccccgttattc
tatttcgtcatcttcggcctgcccggcgccatggcttaccgggccatcaacacgctcgac
tccatggtcgggtacaaagatgaaaagcatataaaagtaggctgggcctcggcgcgcatc
gacgacgtggctaacttcatacccgcccgacttgccgtcttaatcatggccctgatatca
ggccatctaatacgaagcctcaaaacatcgatgcgggacggcaggaacgctcccagcata
aactcgggctacccgatggcggcgttcgccggagcgctgggcctgaggctggaaaaattg
ggctattacgtgttaggagaaggattaaagccatgcggcgccgatgacatacctaaagcc
atctggctgaaccggctgctgacggcgacgctggtcatcgttatcatcgcggcactgtgg
ctgacgccgctgccgttgctctaa
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