Methanocella paludicola: MCP_1962
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Entry
MCP_1962 CDS
T01142
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
mpd
Methanocella paludicola
Pathway
mpd00300
Lysine biosynthesis
mpd00680
Methane metabolism
mpd01100
Metabolic pathways
mpd01110
Biosynthesis of secondary metabolites
mpd01120
Microbial metabolism in diverse environments
mpd01210
2-Oxocarboxylic acid metabolism
mpd01230
Biosynthesis of amino acids
mpd01240
Biosynthesis of cofactors
Module
mpd_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MCP_1962
09105 Amino acid metabolism
00300 Lysine biosynthesis
MCP_1962
Enzymes [BR:
mpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
MCP_1962
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Aconitase_2_N
Motif
Other DBs
NCBI-ProteinID:
BAI62034
UniProt:
D1Z012
LinkDB
All DBs
Position
1970377..1970850
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AA seq
157 aa
AA seq
DB search
MKFRGKAWKYGDNVDTDVIIPGKYLRTADFKTFGDHAMEGIDPRFKPEQGDIIVAGNNFG
CGSSREQAPLALKYAGISCVVAKSFARIFFRNAINVGLPIVEADVFDAIQKGDIVEVDLD
RGLVTIGGKEYTSTKLPEFLQDILNSGGLVAYRRAKK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaggggaaaggcctggaagtacggggataacgtggacactgatgtcattatc
cctggtaagtacctgcgaacggcggacttcaagacgttcggcgatcatgccatggagggc
atcgaccctcgattcaagcctgagcagggcgacatcatagtggccggtaacaacttcggc
tgcggctcgtcacgggaacaggcgcctctcgccctgaaatatgccggtattagctgcgtc
gtagcgaagtccttcgcacggatcttcttcaggaacgcgatcaatgtggggctgcccatc
gtggaagcggacgtcttcgatgccattcagaagggcgatatagtcgaagtggaccttgac
cgaggcctggtcaccatcggaggaaaagagtatacgagcactaagctgcccgaattcctc
caggacatattgaactcgggcggcctggtagcgtacaggagggcaaaaaaatga
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